RNA–Protein interactions for RNA: ENST00000397898.7

SUMO3-203, Transcript of small ubiquitin-like modifier 3, humanhuman

TSL 3 BASIC

Gene SUMO3, Length 1,779 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUMO3-203ENST00000397898 ZC2HC1AQ96GY0 325 aa11.08□□□□□ -0.64
SUMO3-203ENST00000397898 TRAV12-3A0A0B4J271 114 aa11.08□□□□□ -0.64
SUMO3-203ENST00000397898 C7orf71A4D174 169 aa11.08□□□□□ -0.64
SUMO3-203ENST00000397898 GATCO43716 136 aaKnown RBP11.08□□□□□ -0.64
SUMO3-203ENST00000397898 RPS10P46783 165 aaKnown RBP11.08□□□□□ -0.64
SUMO3-203ENST00000397898 FAM3BP58499 235 aaPredicted RBP11.08□□□□□ -0.64
SUMO3-203ENST00000397898 CSNK1G2-AS1Q8NCQ2 148 aa11.08□□□□□ -0.64
SUMO3-203ENST00000397898 TRAV9-1A0A075B6T8 112 aa11.07□□□□□ -0.64
SUMO3-203ENST00000397898 C19orf71A6NCJ1 209 aa11.07□□□□□ -0.64
SUMO3-203ENST00000397898 RBMY1A1P0DJD3 496 aaKnown RBP11.07□□□□□ -0.64
SUMO3-203ENST00000397898 RBMY1CP0DJD4 496 aa11.07□□□□□ -0.64
SUMO3-203ENST00000397898 ZNF80P51504 273 aaPredicted RBP11.07□□□□□ -0.64
SUMO3-203ENST00000397898 RBMY1FQ15415 496 aaKnown RBP11.07□□□□□ -0.64
SUMO3-203ENST00000397898 DAZAP1Q96EP5 407 aaKnown RBP11.07□□□□□ -0.64
SUMO3-203ENST00000397898 C1orf196B1AJZ1 125 aa11.06□□□□□ -0.64
SUMO3-203ENST00000397898 P01737 135 aa11.06□□□□□ -0.64
SUMO3-203ENST00000397898 DEFB135Q30KP9 77 aa11.06□□□□□ -0.64
SUMO3-203ENST00000397898 Q6AWC8 147 aa11.06□□□□□ -0.64
SUMO3-203ENST00000397898 Q6ZQT7 251 aa11.06□□□□□ -0.64
SUMO3-203ENST00000397898 SBSPONQ8IVN8 264 aa11.06□□□□□ -0.64
SUMO3-203ENST00000397898 ZNF324O75467 553 aaPredicted RBP11.05□□□□□ -0.64
SUMO3-203ENST00000397898 TYMSP04818 313 aa11.05□□□□□ -0.64
SUMO3-203ENST00000397898 CRIP1P50238 77 aa11.05□□□□□ -0.64
SUMO3-203ENST00000397898 Q6ZWC4 215 aa11.05□□□□□ -0.64
SUMO3-203ENST00000397898 C1orf158Q8N1D5 194 aa11.05□□□□□ -0.64
SUMO3-203ENST00000397898 RPP21Q9H633 154 aaKnown RBP11.05□□□□□ -0.64
SUMO3-203ENST00000397898 NBEAL2Q6ZNJ1 2754 aa11.05□□□□□ -0.64
SUMO3-203ENST00000397898 SMIM27A0A1W2PRY6 76 aa11.05□□□□□ -0.64
SUMO3-203ENST00000397898 RAB5BP61020 215 aa11.05□□□□□ -0.64
SUMO3-203ENST00000397898 CT83Q5H943 113 aa11.05□□□□□ -0.64
SUMO3-203ENST00000397898 C20orf144Q9BQM9 153 aa11.05□□□□□ -0.64
SUMO3-203ENST00000397898 IGHV3OR16-12A0A075B7B8 117 aa11.04□□□□□ -0.64
SUMO3-203ENST00000397898 TRAV21A0A0B4J279 112 aa11.04□□□□□ -0.64
SUMO3-203ENST00000397898 FAM162BQ5T6X4 162 aa11.04□□□□□ -0.64
SUMO3-203ENST00000397898 RCHY1Q96PM5 261 aa11.04□□□□□ -0.64
SUMO3-203ENST00000397898 TMEM208Q9BTX3 173 aa11.04□□□□□ -0.64
SUMO3-203ENST00000397898 GOLT1BQ9Y3E0 138 aa11.04□□□□□ -0.64
SUMO3-203ENST00000397898 FABP5P3A8MUU1 101 aa11.03□□□□□ -0.64
SUMO3-203ENST00000397898 ZNF705AQ6ZN79 300 aaPredicted RBP11.03□□□□□ -0.64
SUMO3-203ENST00000397898 TSKUQ8WUA8 353 aa11.03□□□□□ -0.64
SUMO3-203ENST00000397898 RNF183Q96D59 192 aa11.03□□□□□ -0.64
SUMO3-203ENST00000397898 SH2D1AO60880 128 aa11.03□□□□□ -0.64
SUMO3-203ENST00000397898 TCL1AP56279 114 aa11.03□□□□□ -0.64
SUMO3-203ENST00000397898 TMEM256Q8N2U0 113 aa11.03□□□□□ -0.64
SUMO3-203ENST00000397898 LINC01587Q99440 93 aa11.03□□□□□ -0.64
SUMO3-203ENST00000397898 A8MWL6 223 aa11.02□□□□□ -0.65
SUMO3-203ENST00000397898 SPRY2O43597 315 aa11.02□□□□□ -0.65
SUMO3-203ENST00000397898 RPL19P84098 196 aaKnown RBP11.02□□□□□ -0.65
SUMO3-203ENST00000397898 B9D2Q9BPU9 175 aa11.02□□□□□ -0.65
SUMO3-203ENST00000397898 TRGC2P03986 189 aa11.01□□□□□ -0.65
SUMO3-203ENST00000397898 MUC21Q5SSG8 566 aa11.01□□□□□ -0.65
SUMO3-203ENST00000397898 ZFP82Q8N141 532 aa11.01□□□□□ -0.65
SUMO3-203ENST00000397898 TM2D3Q9BRN9 247 aa11.01□□□□□ -0.65
SUMO3-203ENST00000397898 RETNQ9HD89 108 aa11.01□□□□□ -0.65
SUMO3-203ENST00000397898 C11orf21Q9P2W6 132 aa11.01□□□□□ -0.65
SUMO3-203ENST00000397898 NAT8BQ9UHF3 227 aa11.01□□□□□ -0.65
SUMO3-203ENST00000397898 NAGKQ9UJ70 344 aa11.01□□□□□ -0.65
SUMO3-203ENST00000397898 TP53TG1Q9Y2A0 90 aa11.01□□□□□ -0.65
SUMO3-203ENST00000397898 HTN1P15515 57 aa11□□□□□ -0.65
SUMO3-203ENST00000397898 OR2D3Q8NGH3 330 aa11□□□□□ -0.65
SUMO3-203ENST00000397898 NEU1Q99519 415 aa11□□□□□ -0.65
SUMO3-203ENST00000397898 OVOL2Q9BRP0 275 aa11□□□□□ -0.65
SUMO3-203ENST00000397898 GFRA4Q9GZZ7 299 aa11□□□□□ -0.65
SUMO3-203ENST00000397898 IGHV1OR15-1A0A075B7D0 117 aa11□□□□□ -0.65
SUMO3-203ENST00000397898 FAM231BA6NCW3 169 aa11□□□□□ -0.65
SUMO3-203ENST00000397898 PRM2P04554 102 aa11□□□□□ -0.65
SUMO3-203ENST00000397898 FAM159AQ6UWV7 190 aa11□□□□□ -0.65
SUMO3-203ENST00000397898 OR11H2Q8NH07 326 aa11□□□□□ -0.65
SUMO3-203ENST00000397898 SPATA25Q9BR10 227 aa11□□□□□ -0.65
SUMO3-203ENST00000397898 X6R8D5 127 aa11□□□□□ -0.65
SUMO3-203ENST00000397898 HIGD1CA8MV81 97 aa10.99□□□□□ -0.65
SUMO3-203ENST00000397898 ORM1P02763 201 aa10.99□□□□□ -0.65
SUMO3-203ENST00000397898 ANXA2RQ3ZCQ2 193 aa10.99□□□□□ -0.65
SUMO3-203ENST00000397898 FBN3Q75N90 2809 aa10.98□□□□□ -0.65
SUMO3-203ENST00000397898 IGKV3D-20A0A0C4DH25 116 aa10.98□□□□□ -0.65
SUMO3-203ENST00000397898 TDRG1Q3Y452 100 aa10.98□□□□□ -0.65
SUMO3-203ENST00000397898 NUP35Q8NFH5 326 aa10.98□□□□□ -0.65
SUMO3-203ENST00000397898 LINC00467Q9BRT7 94 aa10.98□□□□□ -0.65
SUMO3-203ENST00000397898 CBY3A6NI87 242 aa10.98□□□□□ -0.65
SUMO3-203ENST00000397898 LINC01559Q495D7 138 aa10.98□□□□□ -0.65
SUMO3-203ENST00000397898 COX19Q49B96 90 aa10.98□□□□□ -0.65
SUMO3-203ENST00000397898 KCNS1Q96KK3 526 aa10.98□□□□□ -0.65
SUMO3-203ENST00000397898 TP53TG3Q9ULZ0 132 aa10.98□□□□□ -0.65
SUMO3-203ENST00000397898 SMIM9A6NGZ8 99 aa10.97□□□□□ -0.65
SUMO3-203ENST00000397898 PHOX2AO14813 284 aa10.97□□□□□ -0.65
SUMO3-203ENST00000397898 SPINK4O60575 86 aa10.97□□□□□ -0.65
SUMO3-203ENST00000397898 AZU1P20160 251 aa10.97□□□□□ -0.65
SUMO3-203ENST00000397898 RRN3P1Q2M238 152 aa10.97□□□□□ -0.65
SUMO3-203ENST00000397898 MRPL54Q6P161 138 aaKnown RBP10.97□□□□□ -0.65
SUMO3-203ENST00000397898 GTSF1Q8WW33 167 aa10.97□□□□□ -0.65
SUMO3-203ENST00000397898 ZMAT4Q9H898 229 aa10.97□□□□□ -0.65
SUMO3-203ENST00000397898 PRKDCP78527 4128 aaKnown RBP10.97□□□□□ -0.65
SUMO3-203ENST00000397898 XKRY2A2RUG3 117 aa10.96□□□□□ -0.65
SUMO3-203ENST00000397898 TMEM189A5PLL7 270 aa10.96□□□□□ -0.65
SUMO3-203ENST00000397898 GNRH2O43555 120 aa10.96□□□□□ -0.65
SUMO3-203ENST00000397898 WDR73Q6P4I2 378 aa10.96□□□□□ -0.65
SUMO3-203ENST00000397898 RASL11AQ6T310 242 aa10.96□□□□□ -0.65
SUMO3-203ENST00000397898 FRZBQ92765 325 aa10.96□□□□□ -0.65
SUMO3-203ENST00000397898 TRAPPC1Q9Y5R8 145 aa10.96□□□□□ -0.65
SUMO3-203ENST00000397898 TMSB15BA0A087X1C1 80 aa10.95□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 127.7 ms