RNA–Protein interactions for RNA: ENST00000396366.6

FXN-203, Transcript of frataxin, humanhuman

TSL 2 BASIC

Gene FXN, Length 922 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FXN-203ENST00000396366 ZNF80P51504 273 aaPredicted RBP12.51□□□□□ -0.41
FXN-203ENST00000396366 LINC00315P59091 139 aa12.51□□□□□ -0.41
FXN-203ENST00000396366 MRPL23Q16540 153 aaKnown RBP12.51□□□□□ -0.41
FXN-203ENST00000396366 IQCF2Q8IXL9 164 aa12.51□□□□□ -0.41
FXN-203ENST00000396366 APOBP04114 4563 aaKnown RBP12.5□□□□□ -0.41
FXN-203ENST00000396366 TCRAP04437 139 aa12.5□□□□□ -0.41
FXN-203ENST00000396366 GIPP09681 153 aaPredicted RBP12.5□□□□□ -0.41
FXN-203ENST00000396366 KRTAP10-2P60368 255 aa12.5□□□□□ -0.41
FXN-203ENST00000396366 RPL7L1Q6DKI1 246 aaKnown RBP12.5□□□□□ -0.41
FXN-203ENST00000396366 C11orf21Q9P2W6 132 aa12.5□□□□□ -0.41
FXN-203ENST00000396366 RNF222A6NCQ9 220 aa12.49□□□□□ -0.41
FXN-203ENST00000396366 M0R2P5 195 aa12.49□□□□□ -0.41
FXN-203ENST00000396366 IGLV2-11P01706 119 aa12.49□□□□□ -0.41
FXN-203ENST00000396366 GYPEP15421 78 aa12.49□□□□□ -0.41
FXN-203ENST00000396366 SUMO1P63165 101 aaKnown RBP12.49□□□□□ -0.41
FXN-203ENST00000396366 SERF2P84101 59 aa12.49□□□□□ -0.41
FXN-203ENST00000396366 NEGR1Q7Z3B1 354 aa12.49□□□□□ -0.41
FXN-203ENST00000396366 OR4C5Q8NGB2 326 aa12.49□□□□□ -0.41
FXN-203ENST00000396366 PSG8Q9UQ74 426 aa12.49□□□□□ -0.41
FXN-203ENST00000396366 FXYD6-FXYD2A0A087WZ82 144 aa12.48□□□□□ -0.41
FXN-203ENST00000396366 LOC100131303A0A0U1RQF7 123 aa12.48□□□□□ -0.41
FXN-203ENST00000396366 GGTLC3B5MD39 225 aa12.48□□□□□ -0.41
FXN-203ENST00000396366 MBP02144 154 aa12.48□□□□□ -0.41
FXN-203ENST00000396366 Q6ZRN7 208 aaPredicted RBP12.48□□□□□ -0.41
FXN-203ENST00000396366 C5orf17Q8NAS9 161 aa12.48□□□□□ -0.41
FXN-203ENST00000396366 ASB13Q8WXK3 278 aa12.48□□□□□ -0.41
FXN-203ENST00000396366 ACTR3CQ9C0K3 210 aaPredicted RBP12.48□□□□□ -0.41
FXN-203ENST00000396366 SDF2L1Q9HCN8 221 aa12.48□□□□□ -0.41
FXN-203ENST00000396366 TNFSF18Q9UNG2 199 aa12.48□□□□□ -0.41
FXN-203ENST00000396366 TRAV4A0A0B4J268 109 aa12.47□□□□□ -0.41
FXN-203ENST00000396366 CXorf1O96002 111 aa12.47□□□□□ -0.41
FXN-203ENST00000396366 SRIP30626 198 aa12.47□□□□□ -0.41
FXN-203ENST00000396366 ZNF726P1Q15940 193 aa12.47□□□□□ -0.41
FXN-203ENST00000396366 PRNTQ86SH4 94 aa12.47□□□□□ -0.41
FXN-203ENST00000396366 TMEM75Q8N9X5 138 aa12.47□□□□□ -0.41
FXN-203ENST00000396366 INO80EQ8NBZ0 244 aaPredicted RBP12.47□□□□□ -0.41
FXN-203ENST00000396366 EPDR1Q9UM22 224 aa12.47□□□□□ -0.41
FXN-203ENST00000396366 C9JCJ5 164 aa12.46□□□□□ -0.41
FXN-203ENST00000396366 GCGP01275 180 aa12.46□□□□□ -0.41
FXN-203ENST00000396366 BTF3P20290 206 aaKnown RBP12.46□□□□□ -0.41
FXN-203ENST00000396366 WFDC10BQ8IUB3 73 aa12.46□□□□□ -0.41
FXN-203ENST00000396366 KCNS1Q96KK3 526 aa12.46□□□□□ -0.41
FXN-203ENST00000396366 LINC00479Q96M42 142 aa12.46□□□□□ -0.41
FXN-203ENST00000396366 SERTM2A0A1B0GWG4 89 aa12.45□□□□□ -0.42
FXN-203ENST00000396366 G3V3Q6 166 aa12.45□□□□□ -0.42
FXN-203ENST00000396366 FUSP35637 526 aaKnown RBP eCLIP12.45□□□□□ -0.42
FXN-203ENST00000396366 FLI1Q01543 452 aaPredicted RBP12.45□□□□□ -0.42
FXN-203ENST00000396366 OR2T35Q8NGX2 323 aa12.45□□□□□ -0.42
FXN-203ENST00000396366 PCNPQ8WW12 178 aaKnown RBP12.45□□□□□ -0.42
FXN-203ENST00000396366 NDFIP1Q9BT67 221 aa12.45□□□□□ -0.42
FXN-203ENST00000396366 TMEM167BQ9NRX6 74 aa12.45□□□□□ -0.42
FXN-203ENST00000396366 TRAV34A0A0B4J273 112 aa12.44□□□□□ -0.42
FXN-203ENST00000396366 CDK2AP2O75956 126 aa12.44□□□□□ -0.42
FXN-203ENST00000396366 ORM1P02763 201 aa12.44□□□□□ -0.42
FXN-203ENST00000396366 DPPA3Q6W0C5 159 aa12.44□□□□□ -0.42
FXN-203ENST00000396366 BORCS7-ASMTA0A0B4J1R7 106 aa12.43□□□□□ -0.42
FXN-203ENST00000396366 K7EQM0 130 aa12.43□□□□□ -0.42
FXN-203ENST00000396366 TAAR5O14804 337 aa12.43□□□□□ -0.42
FXN-203ENST00000396366 UBE2G2P60604 165 aa12.43□□□□□ -0.42
FXN-203ENST00000396366 ZNF876PQ49A33 203 aa12.43□□□□□ -0.42
FXN-203ENST00000396366 CYB561D1Q8N8Q1 229 aa12.43□□□□□ -0.42
FXN-203ENST00000396366 IGHV3-73A0A0B4J1V6 119 aa12.42□□□□□ -0.42
FXN-203ENST00000396366 PFN1P07737 140 aaKnown RBP12.42□□□□□ -0.42
FXN-203ENST00000396366 GATA1P15976 413 aaPredicted RBP12.42□□□□□ -0.42
FXN-203ENST00000396366 FGF8P55075 233 aaPredicted RBP12.42□□□□□ -0.42
FXN-203ENST00000396366 LY96Q9Y6Y9 160 aa12.42□□□□□ -0.42
FXN-203ENST00000396366 CTXND1A0A1B0GTU2 59 aa12.41□□□□□ -0.42
FXN-203ENST00000396366 A0A1W2PRE2 83 aa12.41□□□□□ -0.42
FXN-203ENST00000396366 PGPEP1LA6NFU8 196 aa12.41□□□□□ -0.42
FXN-203ENST00000396366 SMUG1Q53HV7 270 aa12.41□□□□□ -0.42
FXN-203ENST00000396366 CFAP126Q5VTH2 177 aa12.41□□□□□ -0.42
FXN-203ENST00000396366 MAPKAPK5-AS1Q8N8E1 139 aa12.41□□□□□ -0.42
FXN-203ENST00000396366 SLC25A29Q8N8R3 303 aa12.41□□□□□ -0.42
FXN-203ENST00000396366 C9orf85Q96MD7 179 aa12.41□□□□□ -0.42
FXN-203ENST00000396366 CYTL1Q9NRR1 136 aa12.41□□□□□ -0.42
FXN-203ENST00000396366 FBLL1A6NHQ2 334 aaKnown RBP12.4□□□□□ -0.42
FXN-203ENST00000396366 SMLR1H3BR10 107 aa12.4□□□□□ -0.42
FXN-203ENST00000396366 RS1O15537 224 aa12.4□□□□□ -0.42
FXN-203ENST00000396366 RNASE3P12724 160 aaKnown RBP12.4□□□□□ -0.42
FXN-203ENST00000396366 NHLRC2Q8NBF2 726 aa12.4□□□□□ -0.42
FXN-203ENST00000396366 TXNDC17Q9BRA2 123 aa12.4□□□□□ -0.42
FXN-203ENST00000396366 IGKV3D-20A0A0C4DH25 116 aa12.39□□□□□ -0.43
FXN-203ENST00000396366 ARPC5O15511 151 aa12.39□□□□□ -0.43
FXN-203ENST00000396366 IFNA7P01567 189 aa12.39□□□□□ -0.43
FXN-203ENST00000396366 RGS21Q2M5E4 152 aa12.39□□□□□ -0.43
FXN-203ENST00000396366 ZFP69Q49AA0 526 aa12.39□□□□□ -0.43
FXN-203ENST00000396366 ZNF506Q5JVG8 444 aa12.39□□□□□ -0.43
FXN-203ENST00000396366 SAPCD1Q5SSQ6 148 aa12.39□□□□□ -0.43
FXN-203ENST00000396366 ARL2-SNX15V9GYD0 113 aa12.39□□□□□ -0.43
FXN-203ENST00000396366 TRAV9-2A0A087WT02 112 aa12.38□□□□□ -0.43
FXN-203ENST00000396366 DNAH10OSP0CZ25 163 aa12.38□□□□□ -0.43
FXN-203ENST00000396366 FAM74A7A6NL05 159 aa12.37□□□□□ -0.43
FXN-203ENST00000396366 PEX7O00628 323 aa12.37□□□□□ -0.43
FXN-203ENST00000396366 EVI2AP22794 236 aa12.37□□□□□ -0.43
FXN-203ENST00000396366 AKR1C8PQ5T2L2 129 aa12.37□□□□□ -0.43
FXN-203ENST00000396366 Q6ZSN1 163 aa12.37□□□□□ -0.43
FXN-203ENST00000396366 MSRB1Q9NZV6 116 aa12.37□□□□□ -0.43
FXN-203ENST00000396366 CRIP1P50238 77 aa12.36□□□□□ -0.43
FXN-203ENST00000396366 NFE4Q86UQ8 179 aa12.36□□□□□ -0.43
FXN-203ENST00000396366 CRYGDP07320 174 aa12.35□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 164.4 ms