RNA–Protein interactions for RNA: ENST00000395802.7

VAPB-202, Transcript of VAMP associated protein B and C, humanhuman

TSL 1 (best) BASIC

Gene VAPB, Length 1,834 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPB-202ENST00000395802 TRAV12-3A0A0B4J271 114 aa10.07□□□□□ -0.8
VAPB-202ENST00000395802 TMEM256Q8N2U0 113 aa10.07□□□□□ -0.8
VAPB-202ENST00000395802 NEU1Q99519 415 aa10.07□□□□□ -0.8
VAPB-202ENST00000395802 TRAV12-2A0A075B6T6 113 aa10.06□□□□□ -0.8
VAPB-202ENST00000395802 ZNF324O75467 553 aaPredicted RBP10.06□□□□□ -0.8
VAPB-202ENST00000395802 PRR9Q5T870 116 aa10.06□□□□□ -0.8
VAPB-202ENST00000395802 SAMD5Q5TGI4 173 aa10.06□□□□□ -0.8
VAPB-202ENST00000395802 WFDC10AQ9H1F0 79 aa10.06□□□□□ -0.8
VAPB-202ENST00000395802 AGRNO00468 2067 aa10.06□□□□□ -0.8
VAPB-202ENST00000395802 LOC102724200A0A096LPH7 203 aaPredicted RBP10.05□□□□□ -0.8
VAPB-202ENST00000395802 RBMY1BA6NDE4 496 aaKnown RBP10.05□□□□□ -0.8
VAPB-202ENST00000395802 RBMY1EA6NEQ0 496 aaKnown RBP10.05□□□□□ -0.8
VAPB-202ENST00000395802 HIGD1CA8MV81 97 aa10.05□□□□□ -0.8
VAPB-202ENST00000395802 RBMY1DP0C7P1 496 aaKnown RBP10.05□□□□□ -0.8
VAPB-202ENST00000395802 APOC4P55056 127 aa10.05□□□□□ -0.8
VAPB-202ENST00000395802 FOXA3P55318 350 aaPredicted RBP10.05□□□□□ -0.8
VAPB-202ENST00000395802 TDRG1Q3Y452 100 aa10.05□□□□□ -0.8
VAPB-202ENST00000395802 Q8N1Y9 231 aa10.05□□□□□ -0.8
VAPB-202ENST00000395802 GTSF1Q8WW33 167 aa10.05□□□□□ -0.8
VAPB-202ENST00000395802 BORCS7Q96B45 105 aa10.05□□□□□ -0.8
VAPB-202ENST00000395802 CSTL1Q9H114 145 aa10.05□□□□□ -0.8
VAPB-202ENST00000395802 NAGKQ9UJ70 344 aa10.05□□□□□ -0.8
VAPB-202ENST00000395802 KIR2DL5BA0A0G2JN68 375 aa10.05□□□□□ -0.8
VAPB-202ENST00000395802 KIR2DL5BA0A0G2JPC4 375 aa10.05□□□□□ -0.8
VAPB-202ENST00000395802 FRMD6-AS1P0C7T7 363 aa10.05□□□□□ -0.8
VAPB-202ENST00000395802 KIR2DL5AQ8N109 375 aa10.05□□□□□ -0.8
VAPB-202ENST00000395802 NUP35Q8NFH5 326 aa10.05□□□□□ -0.8
VAPB-202ENST00000395802 KIR2DL5BQ8NHK3 375 aa10.05□□□□□ -0.8
VAPB-202ENST00000395802 TMEM208Q9BTX3 173 aa10.05□□□□□ -0.8
VAPB-202ENST00000395802 IGKV3D-20A0A0C4DH25 116 aa10.04□□□□□ -0.8
VAPB-202ENST00000395802 F2Z2F3 143 aa10.04□□□□□ -0.8
VAPB-202ENST00000395802 CRXO43186 299 aaPredicted RBP10.04□□□□□ -0.8
VAPB-202ENST00000395802 RPL35AP18077 110 aaKnown RBP10.04□□□□□ -0.8
VAPB-202ENST00000395802 S100A4P26447 101 aaKnown RBP10.04□□□□□ -0.8
VAPB-202ENST00000395802 FXYD7P58549 80 aa10.04□□□□□ -0.8
VAPB-202ENST00000395802 KIR3DS1Q14943 382 aa10.04□□□□□ -0.8
VAPB-202ENST00000395802 FRZBQ92765 325 aa10.04□□□□□ -0.8
VAPB-202ENST00000395802 XCL2Q9UBD3 114 aa10.04□□□□□ -0.8
VAPB-202ENST00000395802 GOLT1BQ9Y3E0 138 aa10.04□□□□□ -0.8
VAPB-202ENST00000395802 CMYA5Q8N3K9 4069 aa10.03□□□□□ -0.8
VAPB-202ENST00000395802 IGHV1OR15-1A0A075B7D0 117 aa10.03□□□□□ -0.8
VAPB-202ENST00000395802 G3V4G9 280 aa10.03□□□□□ -0.8
VAPB-202ENST00000395802 HIST1H2BKO60814 126 aa10.03□□□□□ -0.8
VAPB-202ENST00000395802 HIST1H2BJP06899 126 aa10.03□□□□□ -0.8
VAPB-202ENST00000395802 HIST1H2BOP23527 126 aa10.03□□□□□ -0.8
VAPB-202ENST00000395802 HIST1H2BBP33778 126 aa10.03□□□□□ -0.8
VAPB-202ENST00000395802 HIST1H2BDP58876 126 aa10.03□□□□□ -0.8
VAPB-202ENST00000395802 HIST1H2BCP62807 126 aa10.03□□□□□ -0.8
VAPB-202ENST00000395802 HIST2H2BEQ16778 126 aa10.03□□□□□ -0.8
VAPB-202ENST00000395802 HIST2H2BFQ5QNW6 126 aaPredicted RBP10.03□□□□□ -0.8
VAPB-202ENST00000395802 HIST1H2BHQ93079 126 aa10.03□□□□□ -0.8
VAPB-202ENST00000395802 HIST1H2BNQ99877 126 aa10.03□□□□□ -0.8
VAPB-202ENST00000395802 HIST1H2BMQ99879 126 aa10.03□□□□□ -0.8
VAPB-202ENST00000395802 PKD1L1Q8TDX9 2849 aa10.03□□□□□ -0.8
VAPB-202ENST00000395802 TRGV11A0A075B6L2 103 aa10.03□□□□□ -0.8
VAPB-202ENST00000395802 TMSB15BA0A087X1C1 80 aa10.03□□□□□ -0.8
VAPB-202ENST00000395802 SPINK4O60575 86 aa10.03□□□□□ -0.8
VAPB-202ENST00000395802 ASIPP42127 132 aa10.03□□□□□ -0.8
VAPB-202ENST00000395802 KRTAP10-11P60412 298 aa10.03□□□□□ -0.8
VAPB-202ENST00000395802 ANXA2RQ3ZCQ2 193 aa10.03□□□□□ -0.8
VAPB-202ENST00000395802 LINC01587Q99440 93 aa10.03□□□□□ -0.8
VAPB-202ENST00000395802 LINC00467Q9BRT7 94 aa10.03□□□□□ -0.8
VAPB-202ENST00000395802 A8MZ25 164 aa10.02□□□□□ -0.81
VAPB-202ENST00000395802 UBE2CO00762 179 aa10.02□□□□□ -0.81
VAPB-202ENST00000395802 GZMBP10144 247 aa10.02□□□□□ -0.81
VAPB-202ENST00000395802 COX19Q49B96 90 aa10.02□□□□□ -0.81
VAPB-202ENST00000395802 MUC21Q5SSG8 566 aa10.02□□□□□ -0.81
VAPB-202ENST00000395802 DNLZQ5SXM8 178 aa10.02□□□□□ -0.81
VAPB-202ENST00000395802 MRPL54Q6P161 138 aaKnown RBP10.02□□□□□ -0.81
VAPB-202ENST00000395802 ATP5L2Q7Z4Y8 100 aa10.02□□□□□ -0.81
VAPB-202ENST00000395802 FER1L6-AS1Q8NA97 138 aa10.02□□□□□ -0.81
VAPB-202ENST00000395802 A0A1B0GW15 77 aa10.01□□□□□ -0.81
VAPB-202ENST00000395802 CBY3A6NI87 242 aa10.01□□□□□ -0.81
VAPB-202ENST00000395802 S100A8P05109 93 aa10.01□□□□□ -0.81
VAPB-202ENST00000395802 TRGC1P0CF51 173 aa10.01□□□□□ -0.81
VAPB-202ENST00000395802 IGHV4-30-4P0DP06 118 aa10.01□□□□□ -0.81
VAPB-202ENST00000395802 MED14OSP0DP75 135 aa10.01□□□□□ -0.81
VAPB-202ENST00000395802 FABP9Q0Z7S8 132 aa10.01□□□□□ -0.81
VAPB-202ENST00000395802 RASL11AQ6T310 242 aa10.01□□□□□ -0.81
VAPB-202ENST00000395802 TPPP3Q9BW30 176 aa10.01□□□□□ -0.81
VAPB-202ENST00000395802 GNB1LQ9BYB4 327 aa10.01□□□□□ -0.81
VAPB-202ENST00000395802 C11orf21Q9P2W6 132 aa10.01□□□□□ -0.81
VAPB-202ENST00000395802 TRAPPC1Q9Y5R8 145 aa10.01□□□□□ -0.81
VAPB-202ENST00000395802 ZNF575Q86XF7 245 aa10□□□□□ -0.81
VAPB-202ENST00000395802 A0A1B0GUT8 65 aa10□□□□□ -0.81
VAPB-202ENST00000395802 A0A1B0GXF2 115 aa10□□□□□ -0.81
VAPB-202ENST00000395802 SNURFLB1AK76 121 aa10□□□□□ -0.81
VAPB-202ENST00000395802 MT-ND6P03923 174 aa10□□□□□ -0.81
VAPB-202ENST00000395802 OR5AL1P0C617 328 aa10□□□□□ -0.81
VAPB-202ENST00000395802 RIGQ13278 110 aa10□□□□□ -0.81
VAPB-202ENST00000395802 WDR73Q6P4I2 378 aa10□□□□□ -0.81
VAPB-202ENST00000395802 TMEM136Q6ZRR5 245 aa10□□□□□ -0.81
VAPB-202ENST00000395802 PGLYRP4Q96LB8 373 aa10□□□□□ -0.81
VAPB-202ENST00000395802 GRIFINA4D1Z8 144 aa9.99□□□□□ -0.81
VAPB-202ENST00000395802 C5orf52A6NGY3 159 aa9.99□□□□□ -0.81
VAPB-202ENST00000395802 IGLC6P0CF74 106 aa9.99□□□□□ -0.81
VAPB-202ENST00000395802 CACNG7P62955 275 aa9.99□□□□□ -0.81
VAPB-202ENST00000395802 KPRPQ5T749 579 aaPredicted RBP9.99□□□□□ -0.81
VAPB-202ENST00000395802 S100A6P06703 90 aa9.98□□□□□ -0.81
VAPB-202ENST00000395802 CTRLP40313 264 aa9.98□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 214.7 ms