RNA–Protein interactions for RNA: ENST00000394419.8

ACTN1-203, Transcript of actinin alpha 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene ACTN1, Length 3,464 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-203ENST00000394419 IGKV3D-20A0A0C4DH25 116 aa8.12□□□□□ -1.11
ACTN1-203ENST00000394419 IGKCP01834 107 aa8.12□□□□□ -1.11
ACTN1-203ENST00000394419 FAM74A4Q5TZK3 123 aa8.12□□□□□ -1.11
ACTN1-203ENST00000394419 CRYBG3Q68DQ2 2970 aa8.12□□□□□ -1.11
ACTN1-203ENST00000394419 OCIAD2Q56VL3 154 aa8.12□□□□□ -1.11
ACTN1-203ENST00000394419 C1orf122Q6ZSJ8 110 aa8.12□□□□□ -1.11
ACTN1-203ENST00000394419 A0A0G2JLM5 398 aa8.11□□□□□ -1.11
ACTN1-203ENST00000394419 UNQ9165/PRO28630Q6UXU0 137 aa8.11□□□□□ -1.11
ACTN1-203ENST00000394419 MEGF9Q9H1U4 602 aa8.11□□□□□ -1.11
ACTN1-203ENST00000394419 CST9LQ9H4G1 147 aa8.11□□□□□ -1.11
ACTN1-203ENST00000394419 C11orf21Q9P2W6 132 aa8.11□□□□□ -1.11
ACTN1-203ENST00000394419 MOB4Q9Y3A3 225 aa8.11□□□□□ -1.11
ACTN1-203ENST00000394419 TRBV7-1A0A0A6YYK4 115 aa8.11□□□□□ -1.11
ACTN1-203ENST00000394419 C19orf84I3L1E1 186 aa8.11□□□□□ -1.11
ACTN1-203ENST00000394419 DPM2O94777 84 aa8.11□□□□□ -1.11
ACTN1-203ENST00000394419 IGHG4P01861 327 aa8.11□□□□□ -1.11
ACTN1-203ENST00000394419 SEC11AP67812 179 aa8.11□□□□□ -1.11
ACTN1-203ENST00000394419 SFTA2Q6UW10 78 aa8.11□□□□□ -1.11
ACTN1-203ENST00000394419 NEGR1Q7Z3B1 354 aa8.11□□□□□ -1.11
ACTN1-203ENST00000394419 MRPL35Q9NZE8 188 aaKnown RBP8.11□□□□□ -1.11
ACTN1-203ENST00000394419 EMP1P54849 157 aa8.1□□□□□ -1.11
ACTN1-203ENST00000394419 BLCAPP62952 87 aa8.1□□□□□ -1.11
ACTN1-203ENST00000394419 SCGB3A1Q96QR1 104 aa8.1□□□□□ -1.11
ACTN1-203ENST00000394419 HIST1H4GQ99525 98 aa8.1□□□□□ -1.11
ACTN1-203ENST00000394419 SPCS1Q9Y6A9 102 aa8.1□□□□□ -1.11
ACTN1-203ENST00000394419 K7ERJ3 54 aa8.1□□□□□ -1.11
ACTN1-203ENST00000394419 IGLC6P0CF74 106 aa8.1□□□□□ -1.11
ACTN1-203ENST00000394419 HSD52Q0P140 79 aa8.1□□□□□ -1.11
ACTN1-203ENST00000394419 LAGE3Q14657 143 aa8.1□□□□□ -1.11
ACTN1-203ENST00000394419 C2orf91Q6ZV80 131 aa8.1□□□□□ -1.11
ACTN1-203ENST00000394419 Q8N6K4 173 aa8.1□□□□□ -1.11
ACTN1-203ENST00000394419 ZFAND3Q9H8U3 227 aa8.1□□□□□ -1.11
ACTN1-203ENST00000394419 K7ERU9 68 aa8.1□□□□□ -1.11
ACTN1-203ENST00000394419 OVOL3O00110 214 aa8.1□□□□□ -1.11
ACTN1-203ENST00000394419 FABP2P12104 132 aa8.1□□□□□ -1.11
ACTN1-203ENST00000394419 LMO4P61968 165 aa8.1□□□□□ -1.11
ACTN1-203ENST00000394419 MAPK1IP1LQ8NDC0 245 aa8.1□□□□□ -1.11
ACTN1-203ENST00000394419 CCL19Q99731 98 aa8.1□□□□□ -1.11
ACTN1-203ENST00000394419 NOTCH2Q04721 2471 aa8.1□□□□□ -1.11
ACTN1-203ENST00000394419 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP8.09□□□□□ -1.11
ACTN1-203ENST00000394419 SMIM13P0DJ93 91 aa8.09□□□□□ -1.11
ACTN1-203ENST00000394419 IGHV4-38-2P0DP08 117 aa8.09□□□□□ -1.11
ACTN1-203ENST00000394419 SCGB1D4Q6XE38 83 aa8.09□□□□□ -1.11
ACTN1-203ENST00000394419 RNF185Q96GF1 192 aa8.09□□□□□ -1.11
ACTN1-203ENST00000394419 ATP5LO75964 103 aa8.09□□□□□ -1.11
ACTN1-203ENST00000394419 ASIPP42127 132 aa8.09□□□□□ -1.11
ACTN1-203ENST00000394419 OR4X2Q8NGF9 303 aa8.09□□□□□ -1.11
ACTN1-203ENST00000394419 ZNF48Q96MX3 618 aaPredicted RBP8.09□□□□□ -1.11
ACTN1-203ENST00000394419 PIMREGQ9BSJ6 248 aa8.09□□□□□ -1.11
ACTN1-203ENST00000394419 NPFFR1Q9GZQ6 430 aa8.09□□□□□ -1.11
ACTN1-203ENST00000394419 IGKV2D-26A0A0A0MRZ7 120 aa8.09□□□□□ -1.11
ACTN1-203ENST00000394419 IGHV4-61A0A0C4DH41 118 aa8.09□□□□□ -1.11
ACTN1-203ENST00000394419 GNRH2O43555 120 aa8.09□□□□□ -1.11
ACTN1-203ENST00000394419 SRSF1Q07955 248 aaKnown RBP eCLIP8.09□□□□□ -1.11
ACTN1-203ENST00000394419 TMEM95Q3KNT9 176 aa8.09□□□□□ -1.11
ACTN1-203ENST00000394419 C5orf56Q8N8D9 126 aa8.09□□□□□ -1.11
ACTN1-203ENST00000394419 OR9G4Q8NGQ1 327 aa8.09□□□□□ -1.11
ACTN1-203ENST00000394419 AGRNO00468 2067 aa8.08□□□□□ -1.12
ACTN1-203ENST00000394419 KHDC1LQ5JSQ8 128 aa8.08□□□□□ -1.12
ACTN1-203ENST00000394419 OR1N2Q8NGR9 330 aa8.08□□□□□ -1.12
ACTN1-203ENST00000394419 SAP30O75446 220 aa8.08□□□□□ -1.12
ACTN1-203ENST00000394419 IGHV4-39P01824 125 aa8.08□□□□□ -1.12
ACTN1-203ENST00000394419 RHPN1-AS1Q9BWJ2 59 aa8.08□□□□□ -1.12
ACTN1-203ENST00000394419 EBI3Q14213 229 aa8.08□□□□□ -1.12
ACTN1-203ENST00000394419 ANXA2RQ3ZCQ2 193 aa8.08□□□□□ -1.12
ACTN1-203ENST00000394419 LINC01559Q495D7 138 aa8.08□□□□□ -1.12
ACTN1-203ENST00000394419 MTURNQ8N3F0 131 aa8.08□□□□□ -1.12
ACTN1-203ENST00000394419 Q8N8P6 123 aa8.08□□□□□ -1.12
ACTN1-203ENST00000394419 RPL39LQ96EH5 51 aaKnown RBP8.08□□□□□ -1.12
ACTN1-203ENST00000394419 DUX5Q96PT3 197 aa8.08□□□□□ -1.12
ACTN1-203ENST00000394419 A0A087WWL8 130 aa8.07□□□□□ -1.12
ACTN1-203ENST00000394419 TRAV21A0A0B4J279 112 aa8.07□□□□□ -1.12
ACTN1-203ENST00000394419 IGHV1-69DA0A0B4J2H0 117 aa8.07□□□□□ -1.12
ACTN1-203ENST00000394419 CLPSL1A2RUU4 121 aa8.07□□□□□ -1.12
ACTN1-203ENST00000394419 IGHV1-69P01742 117 aa8.07□□□□□ -1.12
ACTN1-203ENST00000394419 BOD1L2Q8IYS8 172 aa8.07□□□□□ -1.12
ACTN1-203ENST00000394419 NRGNQ92686 78 aa8.07□□□□□ -1.12
ACTN1-203ENST00000394419 CHAC1Q9BUX1 264 aa8.07□□□□□ -1.12
ACTN1-203ENST00000394419 ANKRD17O75179 2603 aaKnown RBP8.07□□□□□ -1.12
ACTN1-203ENST00000394419 TRAV8-2A0A0B4J237 113 aa8.07□□□□□ -1.12
ACTN1-203ENST00000394419 ZNF688P0C7X2 276 aa8.07□□□□□ -1.12
ACTN1-203ENST00000394419 SRSF9Q13242 221 aaKnown RBP eCLIP8.07□□□□□ -1.12
ACTN1-203ENST00000394419 FAM159AQ6UWV7 190 aa8.07□□□□□ -1.12
ACTN1-203ENST00000394419 JMJD8Q96S16 334 aa8.07□□□□□ -1.12
ACTN1-203ENST00000394419 ZNF462Q96JM2 2506 aa8.07□□□□□ -1.12
ACTN1-203ENST00000394419 TRAV12-3A0A0B4J271 114 aa8.06□□□□□ -1.12
ACTN1-203ENST00000394419 OR11H12B2RN74 326 aa8.06□□□□□ -1.12
ACTN1-203ENST00000394419 NDUFS8O00217 210 aa8.06□□□□□ -1.12
ACTN1-203ENST00000394419 CD7P09564 240 aa8.06□□□□□ -1.12
ACTN1-203ENST00000394419 ODF1Q14990 250 aa8.06□□□□□ -1.12
ACTN1-203ENST00000394419 SAMD5Q5TGI4 173 aa8.06□□□□□ -1.12
ACTN1-203ENST00000394419 C9orf139Q6ZV77 190 aa8.06□□□□□ -1.12
ACTN1-203ENST00000394419 OR11H1Q8NG94 326 aa8.06□□□□□ -1.12
ACTN1-203ENST00000394419 OR11H2Q8NH07 326 aa8.06□□□□□ -1.12
ACTN1-203ENST00000394419 C20orf173Q96LM9 149 aa8.06□□□□□ -1.12
ACTN1-203ENST00000394419 U3KQK5 164 aa8.06□□□□□ -1.12
ACTN1-203ENST00000394419 FXYD2P54710 66 aa8.06□□□□□ -1.12
ACTN1-203ENST00000394419 PRR9Q5T870 116 aa8.06□□□□□ -1.12
ACTN1-203ENST00000394419 DPF1Q92782 380 aa8.06□□□□□ -1.12
ACTN1-203ENST00000394419 ZNF256Q9Y2P7 627 aaPredicted RBP8.06□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms