RNA–Protein interactions for RNA: ENST00000384433.1

RNU6-549P-201, Transcript of RNA, U6 small nuclear 549, pseudogene, humanhuman

BASIC

Gene RNU6-549P, Length 107 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-549P-201ENST00000384433 ZNF56Q15929 161 aa0.68□□□□□ -2.3
RNU6-549P-201ENST00000384433 SPATA8Q6RVD6 105 aa0.68□□□□□ -2.3
RNU6-549P-201ENST00000384433 BANF2Q9H503 90 aa0.68□□□□□ -2.3
RNU6-549P-201ENST00000384433 MRPL35Q9NZE8 188 aaKnown RBP0.68□□□□□ -2.3
RNU6-549P-201ENST00000384433 CALML5Q9NZT1 146 aa0.68□□□□□ -2.3
RNU6-549P-201ENST00000384433 METTL1Q9UBP6 276 aaKnown RBP0.68□□□□□ -2.3
RNU6-549P-201ENST00000384433 XIRP1Q702N8 1843 aaKnown RBP0.68□□□□□ -2.3
RNU6-549P-201ENST00000384433 TENM3Q9P273 2699 aa0.68□□□□□ -2.3
RNU6-549P-201ENST00000384433 TPST1O60507 370 aa0.67□□□□□ -2.3
RNU6-549P-201ENST00000384433 ADCYAP1P18509 176 aa0.67□□□□□ -2.3
RNU6-549P-201ENST00000384433 EVI2AP22794 236 aa0.67□□□□□ -2.3
RNU6-549P-201ENST00000384433 LSM3P62310 102 aaKnown RBP0.67□□□□□ -2.3
RNU6-549P-201ENST00000384433 IDO2Q6ZQW0 420 aa0.67□□□□□ -2.3
RNU6-549P-201ENST00000384433 OR4S1Q8NGB4 309 aa0.67□□□□□ -2.3
RNU6-549P-201ENST00000384433 DNAJC15Q9Y5T4 150 aa0.67□□□□□ -2.3
RNU6-549P-201ENST00000384433 LRP5O75197 1615 aa0.67□□□□□ -2.3
RNU6-549P-201ENST00000384433 AHNAK2Q8IVF2 5795 aa0.67□□□□□ -2.3
RNU6-549P-201ENST00000384433 PTPRGP23470 1445 aa0.66□□□□□ -2.3
RNU6-549P-201ENST00000384433 RHOHQ15669 191 aa0.66□□□□□ -2.3
RNU6-549P-201ENST00000384433 TMEM91Q6ZNR0 172 aa0.66□□□□□ -2.3
RNU6-549P-201ENST00000384433 DEFB132Q7Z7B7 95 aa0.66□□□□□ -2.3
RNU6-549P-201ENST00000384433 TCTE3Q8IZS6 198 aa0.66□□□□□ -2.3
RNU6-549P-201ENST00000384433 FAM103A1Q9BTL3 118 aaKnown RBP0.66□□□□□ -2.3
RNU6-549P-201ENST00000384433 A0A0G2JMM0 328 aa0.65□□□□□ -2.31
RNU6-549P-201ENST00000384433 OR2H2O95918 312 aa0.65□□□□□ -2.31
RNU6-549P-201ENST00000384433 SCTP09683 121 aa0.65□□□□□ -2.31
RNU6-549P-201ENST00000384433 ASB16-AS1Q495Z4 193 aa0.65□□□□□ -2.31
RNU6-549P-201ENST00000384433 CPDO75976 1380 aa0.65□□□□□ -2.31
RNU6-549P-201ENST00000384433 ZCCHC6Q5VYS8 1495 aaKnown RBP0.65□□□□□ -2.31
RNU6-549P-201ENST00000384433 HIST1H1BP16401 226 aaKnown RBP0.64□□□□□ -2.31
RNU6-549P-201ENST00000384433 DMAC1Q96GE9 116 aa0.64□□□□□ -2.31
RNU6-549P-201ENST00000384433 SLC35B3Q9H1N7 401 aa0.64□□□□□ -2.31
RNU6-549P-201ENST00000384433 ASH1LQ9NR48 2969 aaKnown RBP0.63□□□□□ -2.31
RNU6-549P-201ENST00000384433 SYNJ1O43426 1573 aa0.63□□□□□ -2.31
RNU6-549P-201ENST00000384433 CDK12Q9NYV4 1490 aaPredicted RBP0.63□□□□□ -2.31
RNU6-549P-201ENST00000384433 TRAV17A0A0B4J275 112 aa0.63□□□□□ -2.31
RNU6-549P-201ENST00000384433 PNMA8CA0A1B0GUJ8 204 aa0.63□□□□□ -2.31
RNU6-549P-201ENST00000384433 FXYD1O00168 92 aa0.63□□□□□ -2.31
RNU6-549P-201ENST00000384433 KDELR1P24390 212 aa0.63□□□□□ -2.31
RNU6-549P-201ENST00000384433 CCDC153Q494R4 210 aa0.63□□□□□ -2.31
RNU6-549P-201ENST00000384433 C10orf99Q6UWK7 81 aa0.63□□□□□ -2.31
RNU6-549P-201ENST00000384433 ATG5Q9H1Y0 275 aa0.63□□□□□ -2.31
RNU6-549P-201ENST00000384433 TRPM7Q96QT4 1865 aa0.63□□□□□ -2.31
RNU6-549P-201ENST00000384433 KIDINS220Q9ULH0 1771 aa0.62□□□□□ -2.31
RNU6-549P-201ENST00000384433 HIGD1CA8MV81 97 aa0.62□□□□□ -2.31
RNU6-549P-201ENST00000384433 ARPC5O15511 151 aa0.62□□□□□ -2.31
RNU6-549P-201ENST00000384433 HLA-DRB4P13762 266 aa0.62□□□□□ -2.31
RNU6-549P-201ENST00000384433 UNQ5815/PRO19632Q6UWF5 114 aa0.62□□□□□ -2.31
RNU6-549P-201ENST00000384433 HLA-DRB4X5D2U9 266 aa0.62□□□□□ -2.31
RNU6-549P-201ENST00000384433 MACF1Q9UPN3 7388 aaKnown RBP0.62□□□□□ -2.31
RNU6-549P-201ENST00000384433 SPTBP11277 2137 aa0.62□□□□□ -2.31
RNU6-549P-201ENST00000384433 PRH1P02810 166 aa0.61□□□□□ -2.31
RNU6-549P-201ENST00000384433 CCKP06307 115 aa0.61□□□□□ -2.31
RNU6-549P-201ENST00000384433 AKR1D1P51857 326 aa0.61□□□□□ -2.31
RNU6-549P-201ENST00000384433 POLR2JP52435 117 aaKnown RBP0.61□□□□□ -2.31
RNU6-549P-201ENST00000384433 CLLU1Q5K131 121 aa0.61□□□□□ -2.31
RNU6-549P-201ENST00000384433 PYDC1Q8WXC3 89 aa0.61□□□□□ -2.31
RNU6-549P-201ENST00000384433 AIF1LQ9BQI0 150 aa0.61□□□□□ -2.31
RNU6-549P-201ENST00000384433 MYH1P12882 1939 aa0.6□□□□□ -2.31
RNU6-549P-201ENST00000384433 SMIM24O75264 130 aa0.6□□□□□ -2.31
RNU6-549P-201ENST00000384433 KRTAP2-3P0C7H8 128 aa0.6□□□□□ -2.31
RNU6-549P-201ENST00000384433 SCGB1A1P11684 91 aa0.6□□□□□ -2.31
RNU6-549P-201ENST00000384433 PLGLB1Q02325 96 aa0.6□□□□□ -2.31
RNU6-549P-201ENST00000384433 SLC25A26Q70HW3 274 aa0.6□□□□□ -2.31
RNU6-549P-201ENST00000384433 SNX29P2Q8IUI4 249 aa0.6□□□□□ -2.31
RNU6-549P-201ENST00000384433 KRTAP2-4Q9BYR9 128 aa0.6□□□□□ -2.31
RNU6-549P-201ENST00000384433 KRTAP2-1Q9BYU5 128 aa0.6□□□□□ -2.31
RNU6-549P-201ENST00000384433 LSM2Q9Y333 95 aaKnown RBP0.6□□□□□ -2.31
RNU6-549P-201ENST00000384433 BORCS7-ASMTA0A0B4J1R7 106 aa0.59□□□□□ -2.31
RNU6-549P-201ENST00000384433 SPINK7P58062 85 aa0.59□□□□□ -2.31
RNU6-549P-201ENST00000384433 RPL37P61927 97 aaKnown RBP0.59□□□□□ -2.31
RNU6-549P-201ENST00000384433 MORN2Q502X0 79 aa0.59□□□□□ -2.31
RNU6-549P-201ENST00000384433 SYNE2Q8WXH0 6885 aaKnown RBP0.59□□□□□ -2.32
RNU6-549P-201ENST00000384433 LOC285556D6RIA3 1793 aa0.59□□□□□ -2.32
RNU6-549P-201ENST00000384433 MEGF8Q7Z7M0 2845 aa0.59□□□□□ -2.32
RNU6-549P-201ENST00000384433 ARHGEF10O15013 1369 aa0.58□□□□□ -2.32
RNU6-549P-201ENST00000384433 TRBV10-1A0A0K0K1A3 114 aa0.58□□□□□ -2.32
RNU6-549P-201ENST00000384433 CXorf51AA0A1B0GTR3 108 aa0.58□□□□□ -2.32
RNU6-549P-201ENST00000384433 KRTAP21-1Q3LI58 79 aa0.58□□□□□ -2.32
RNU6-549P-201ENST00000384433 BCORL1Q5H9F3 1711 aa0.58□□□□□ -2.32
RNU6-549P-201ENST00000384433 RREB1Q92766 1687 aa0.57□□□□□ -2.32
RNU6-549P-201ENST00000384433 M0R129 80 aa0.57□□□□□ -2.32
RNU6-549P-201ENST00000384433 HELZP42694 1942 aaKnown RBP0.57□□□□□ -2.32
RNU6-549P-201ENST00000384433 MUC5ACP98088 5654 aa0.56□□□□□ -2.32
RNU6-549P-201ENST00000384433 UNC13AQ9UPW8 1703 aa0.56□□□□□ -2.32
RNU6-549P-201ENST00000384433 LOC105371267A0A1B0GV96 52 aa0.56□□□□□ -2.32
RNU6-549P-201ENST00000384433 DBIP07108 87 aaKnown RBP0.56□□□□□ -2.32
RNU6-549P-201ENST00000384433 FXYD6P3P58550 94 aa0.56□□□□□ -2.32
RNU6-549P-201ENST00000384433 HIST1H1AQ02539 215 aaPredicted RBP0.56□□□□□ -2.32
RNU6-549P-201ENST00000384433 SMR3AQ99954 134 aa0.56□□□□□ -2.32
RNU6-549P-201ENST00000384433 SPANXA1Q9NS26 97 aa0.56□□□□□ -2.32
RNU6-549P-201ENST00000384433 GSKIPQ9P0R6 139 aa0.56□□□□□ -2.32
RNU6-549P-201ENST00000384433 NOP16Q9Y3C1 178 aaKnown RBP0.56□□□□□ -2.32
RNU6-549P-201ENST00000384433 FSIP2Q5CZC0 6907 aa0.56□□□□□ -2.32
RNU6-549P-201ENST00000384433 KNTC1P50748 2209 aa0.56□□□□□ -2.32
RNU6-549P-201ENST00000384433 APCP25054 2843 aa0.55□□□□□ -2.32
RNU6-549P-201ENST00000384433 CKS1BP61024 79 aa0.55□□□□□ -2.32
RNU6-549P-201ENST00000384433 SPINK13Q1W4C9 94 aa0.55□□□□□ -2.32
RNU6-549P-201ENST00000384433 BATF3Q9NR55 127 aa0.55□□□□□ -2.32
RNU6-549P-201ENST00000384433 TAS2R8Q9NYW2 309 aa0.55□□□□□ -2.32
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms