RNA–Protein interactions for RNA: ENST00000378244.6

DEPDC4-202, Transcript of DEP domain containing 4, humanhuman

TSL 2

Gene DEPDC4, Length 2,337 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC4-202ENST00000378244 EIF4E3Q8N5X7 224 aaKnown RBP8.38□□□□□ -1.07
DEPDC4-202ENST00000378244 C16orf74Q96GX8 76 aa8.38□□□□□ -1.07
DEPDC4-202ENST00000378244 RAB19A4D1S5 217 aa8.37□□□□□ -1.07
DEPDC4-202ENST00000378244 SNURFLB1AK76 121 aa8.37□□□□□ -1.07
DEPDC4-202ENST00000378244 PDE6DO43924 150 aa8.37□□□□□ -1.07
DEPDC4-202ENST00000378244 LTAP01374 205 aa8.37□□□□□ -1.07
DEPDC4-202ENST00000378244 PFN1P07737 140 aaKnown RBP8.37□□□□□ -1.07
DEPDC4-202ENST00000378244 ANXA2RQ3ZCQ2 193 aa8.37□□□□□ -1.07
DEPDC4-202ENST00000378244 MDFICQ9P1T7 246 aa8.37□□□□□ -1.07
DEPDC4-202ENST00000378244 C11orf21Q9P2W6 132 aa8.37□□□□□ -1.07
DEPDC4-202ENST00000378244 ZFP30Q9Y2G7 519 aa8.37□□□□□ -1.07
DEPDC4-202ENST00000378244 TIMM8BQ9Y5J9 83 aaPredicted RBP8.37□□□□□ -1.07
DEPDC4-202ENST00000378244 M0R036 132 aa8.37□□□□□ -1.07
DEPDC4-202ENST00000378244 C12orf74Q32Q52 190 aa8.37□□□□□ -1.07
DEPDC4-202ENST00000378244 PRR27Q6MZM9 219 aa8.37□□□□□ -1.07
DEPDC4-202ENST00000378244 ZNF493Q6ZR52 646 aa8.37□□□□□ -1.07
DEPDC4-202ENST00000378244 TXNDC17Q9BRA2 123 aa8.37□□□□□ -1.07
DEPDC4-202ENST00000378244 HTN3P15516 51 aa8.36□□□□□ -1.07
DEPDC4-202ENST00000378244 CRIP1P50238 77 aa8.36□□□□□ -1.07
DEPDC4-202ENST00000378244 ORM1P02763 201 aa8.36□□□□□ -1.07
DEPDC4-202ENST00000378244 CASC10Q5T4H9 136 aa8.36□□□□□ -1.07
DEPDC4-202ENST00000378244 PHLDA1Q8WV24 401 aaPredicted RBP8.36□□□□□ -1.07
DEPDC4-202ENST00000378244 C11orf52Q96A22 123 aa8.36□□□□□ -1.07
DEPDC4-202ENST00000378244 GAGE12BA1L429 117 aa8.35□□□□□ -1.07
DEPDC4-202ENST00000378244 FABP5P3A8MUU1 101 aa8.35□□□□□ -1.07
DEPDC4-202ENST00000378244 GAGE7O76087 117 aa8.35□□□□□ -1.07
DEPDC4-202ENST00000378244 GAGE12FP0CL80 117 aa8.35□□□□□ -1.07
DEPDC4-202ENST00000378244 GAGE12GP0CL81 117 aa8.35□□□□□ -1.07
DEPDC4-202ENST00000378244 GAGE12IP0CL82 117 aa8.35□□□□□ -1.07
DEPDC4-202ENST00000378244 DAD1P61803 113 aa8.35□□□□□ -1.07
DEPDC4-202ENST00000378244 CENPWQ5EE01 88 aa8.35□□□□□ -1.07
DEPDC4-202ENST00000378244 C11orf72Q8NBR9 251 aa8.35□□□□□ -1.07
DEPDC4-202ENST00000378244 TRBV20OR9-2A0A075B6H5 130 aa8.35□□□□□ -1.07
DEPDC4-202ENST00000378244 TMSB15BA0A087X1C1 80 aa8.35□□□□□ -1.07
DEPDC4-202ENST00000378244 MGST1P10620 155 aaKnown RBP8.35□□□□□ -1.07
DEPDC4-202ENST00000378244 ZNF506Q5JVG8 444 aa8.35□□□□□ -1.07
DEPDC4-202ENST00000378244 Q6ZTI0 123 aa8.35□□□□□ -1.07
DEPDC4-202ENST00000378244 SH2D1AO60880 128 aa8.34□□□□□ -1.07
DEPDC4-202ENST00000378244 SCGB1D1O95968 90 aa8.34□□□□□ -1.07
DEPDC4-202ENST00000378244 TYMSP04818 313 aa8.34□□□□□ -1.07
DEPDC4-202ENST00000378244 GNG4P50150 75 aa8.34□□□□□ -1.07
DEPDC4-202ENST00000378244 RAB14P61106 215 aa8.34□□□□□ -1.07
DEPDC4-202ENST00000378244 IFITM2Q01629 132 aa8.34□□□□□ -1.07
DEPDC4-202ENST00000378244 FAM162BQ5T6X4 162 aa8.34□□□□□ -1.07
DEPDC4-202ENST00000378244 SDF2L1Q9HCN8 221 aa8.34□□□□□ -1.07
DEPDC4-202ENST00000378244 TRGV1A0A0A0MS02 117 aa8.34□□□□□ -1.08
DEPDC4-202ENST00000378244 SRSF3P84103 164 aaKnown RBP8.34□□□□□ -1.08
DEPDC4-202ENST00000378244 TDRG1Q3Y452 100 aa8.34□□□□□ -1.08
DEPDC4-202ENST00000378244 KCNS1Q96KK3 526 aa8.34□□□□□ -1.08
DEPDC4-202ENST00000378244 MRPL16Q9NX20 251 aaKnown RBP8.34□□□□□ -1.08
DEPDC4-202ENST00000378244 IGKV3D-20A0A0C4DH25 116 aa8.33□□□□□ -1.08
DEPDC4-202ENST00000378244 TRBV6-1A0A0K0K1D8 114 aa8.33□□□□□ -1.08
DEPDC4-202ENST00000378244 XKRY2A2RUG3 117 aa8.33□□□□□ -1.08
DEPDC4-202ENST00000378244 LYRM9A8MSI8 78 aa8.33□□□□□ -1.08
DEPDC4-202ENST00000378244 C3orf84H3BNL1 204 aa8.33□□□□□ -1.08
DEPDC4-202ENST00000378244 LINC00467Q9BRT7 94 aa8.33□□□□□ -1.08
DEPDC4-202ENST00000378244 MLST8Q9BVC4 326 aa8.33□□□□□ -1.08
DEPDC4-202ENST00000378244 PARLQ9H300 379 aa8.33□□□□□ -1.08
DEPDC4-202ENST00000378244 TRGV11A0A075B6L2 103 aa8.32□□□□□ -1.08
DEPDC4-202ENST00000378244 DEFB131BA0A096LNP1 70 aa8.32□□□□□ -1.08
DEPDC4-202ENST00000378244 GRIFINA4D1Z8 144 aa8.32□□□□□ -1.08
DEPDC4-202ENST00000378244 TCL1AP56279 114 aa8.32□□□□□ -1.08
DEPDC4-202ENST00000378244 RPL19P84098 196 aaKnown RBP8.32□□□□□ -1.08
DEPDC4-202ENST00000378244 ZNF415Q09FC8 603 aa8.32□□□□□ -1.08
DEPDC4-202ENST00000378244 STARD9Q9P2P6 4700 aa8.32□□□□□ -1.08
DEPDC4-202ENST00000378244 DNAH7Q8WXX0 4024 aa8.32□□□□□ -1.08
DEPDC4-202ENST00000378244 TRGV2A0A075B6R0 118 aa8.32□□□□□ -1.08
DEPDC4-202ENST00000378244 IGHV3-16A0A0C4DH30 117 aa8.32□□□□□ -1.08
DEPDC4-202ENST00000378244 B4DEV8 164 aa8.32□□□□□ -1.08
DEPDC4-202ENST00000378244 IGLL5B9A064 214 aa8.32□□□□□ -1.08
DEPDC4-202ENST00000378244 CIDEAO60543 219 aa8.32□□□□□ -1.08
DEPDC4-202ENST00000378244 OR5I1Q13606 314 aa8.32□□□□□ -1.08
DEPDC4-202ENST00000378244 IBA57Q5T440 356 aaKnown RBP8.32□□□□□ -1.08
DEPDC4-202ENST00000378244 TEX48A0A1B0GUV7 120 aa8.31□□□□□ -1.08
DEPDC4-202ENST00000378244 C9JQL5 133 aa8.31□□□□□ -1.08
DEPDC4-202ENST00000378244 TMEM250H0YL14 139 aa8.31□□□□□ -1.08
DEPDC4-202ENST00000378244 IGLV2-8P01709 118 aa8.31□□□□□ -1.08
DEPDC4-202ENST00000378244 S100A4P26447 101 aaKnown RBP8.31□□□□□ -1.08
DEPDC4-202ENST00000378244 DAZ2Q13117 558 aaKnown RBP8.31□□□□□ -1.08
DEPDC4-202ENST00000378244 CEMP1Q6PRD7 247 aaPredicted RBP8.31□□□□□ -1.08
DEPDC4-202ENST00000378244 C9JCJ5 164 aa8.31□□□□□ -1.08
DEPDC4-202ENST00000378244 COX8CQ7Z4L0 72 aa8.31□□□□□ -1.08
DEPDC4-202ENST00000378244 TRAV10A0A0B4J240 114 aa8.3□□□□□ -1.08
DEPDC4-202ENST00000378244 NUPR2A6NF83 97 aa8.3□□□□□ -1.08
DEPDC4-202ENST00000378244 IGHV3-53P01767 116 aa8.3□□□□□ -1.08
DEPDC4-202ENST00000378244 SRP19P09132 144 aaKnown RBP8.3□□□□□ -1.08
DEPDC4-202ENST00000378244 COTL1Q14019 142 aa8.3□□□□□ -1.08
DEPDC4-202ENST00000378244 OCC1Q8TAD7 63 aa8.3□□□□□ -1.08
DEPDC4-202ENST00000378244 F5H768 121 aa8.3□□□□□ -1.08
DEPDC4-202ENST00000378244 SMIM7Q9BQ49 75 aa8.3□□□□□ -1.08
DEPDC4-202ENST00000378244 KRBOX1C9JBD0 128 aa8.29□□□□□ -1.08
DEPDC4-202ENST00000378244 H3BVH4 76 aa8.29□□□□□ -1.08
DEPDC4-202ENST00000378244 RNASE3P12724 160 aaKnown RBP8.29□□□□□ -1.08
DEPDC4-202ENST00000378244 SSTP61278 116 aa8.29□□□□□ -1.08
DEPDC4-202ENST00000378244 ZNF727A8MUV8 499 aa8.29□□□□□ -1.08
DEPDC4-202ENST00000378244 SPINK4O60575 86 aa8.29□□□□□ -1.08
DEPDC4-202ENST00000378244 ATP5G1P05496 136 aa8.29□□□□□ -1.08
DEPDC4-202ENST00000378244 ASIPP42127 132 aa8.29□□□□□ -1.08
DEPDC4-202ENST00000378244 ZNF876PQ49A33 203 aa8.29□□□□□ -1.08
DEPDC4-202ENST00000378244 C4orf48Q5BLP8 95 aa8.29□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 74 ms