RNA–Protein interactions for RNA: ENST00000376656.8

TRIM39-201, Transcript of tripartite motif containing 39, humanhuman

APPRIS P4 TSL 2 BASIC

Gene TRIM39, Length 3,338 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-201ENST00000376656 ABCA4P78363 2273 aa12.63□□□□□ -0.39
TRIM39-201ENST00000376656 CFAP126Q5VTH2 177 aa12.62□□□□□ -0.39
TRIM39-201ENST00000376656 SYT8Q8NBV8 401 aa12.62□□□□□ -0.39
TRIM39-201ENST00000376656 PRADC1Q9BSG0 188 aa12.62□□□□□ -0.39
TRIM39-201ENST00000376656 CACNA1BQ00975 2339 aa12.62□□□□□ -0.39
TRIM39-201ENST00000376656 IGHV4-4A0A075B6R2 117 aa12.62□□□□□ -0.39
TRIM39-201ENST00000376656 LINC01549A6NIU2 74 aa12.62□□□□□ -0.39
TRIM39-201ENST00000376656 IGF2-ASQ6U949 168 aa12.62□□□□□ -0.39
TRIM39-201ENST00000376656 Q8N6K4 173 aa12.62□□□□□ -0.39
TRIM39-201ENST00000376656 C1QTNF4Q9BXJ3 329 aa12.62□□□□□ -0.39
TRIM39-201ENST00000376656 SVEP1Q4LDE5 3571 aa12.62□□□□□ -0.39
TRIM39-201ENST00000376656 TCTEX1D4Q5JR98 221 aa12.62□□□□□ -0.39
TRIM39-201ENST00000376656 PRR9Q5T870 116 aa12.62□□□□□ -0.39
TRIM39-201ENST00000376656 NFE4Q86UQ8 179 aa12.62□□□□□ -0.39
TRIM39-201ENST00000376656 TOMM6Q96B49 74 aa12.62□□□□□ -0.39
TRIM39-201ENST00000376656 PLEKHB2Q96CS7 222 aa12.62□□□□□ -0.39
TRIM39-201ENST00000376656 SCGB2A2Q13296 93 aa12.61□□□□□ -0.39
TRIM39-201ENST00000376656 LINC01560Q8TB33 94 aa12.61□□□□□ -0.39
TRIM39-201ENST00000376656 CDIP1Q9H305 208 aa12.61□□□□□ -0.39
TRIM39-201ENST00000376656 A6NJY4 79 aa12.61□□□□□ -0.39
TRIM39-201ENST00000376656 RPL39LQ96EH5 51 aaKnown RBP12.61□□□□□ -0.39
TRIM39-201ENST00000376656 MRAP2Q96G30 205 aa12.61□□□□□ -0.39
TRIM39-201ENST00000376656 ECSCRQ19T08 205 aa12.6□□□□□ -0.39
TRIM39-201ENST00000376656 VKORC1Q9BQB6 163 aa12.6□□□□□ -0.39
TRIM39-201ENST00000376656 ZNF815PA8K554 130 aa12.6□□□□□ -0.39
TRIM39-201ENST00000376656 J3KRW8 73 aa12.6□□□□□ -0.39
TRIM39-201ENST00000376656 PRTN3P24158 256 aa12.6□□□□□ -0.39
TRIM39-201ENST00000376656 ORMDL2Q53FV1 153 aa12.6□□□□□ -0.39
TRIM39-201ENST00000376656 ZFP2Q6ZN57 461 aa12.6□□□□□ -0.39
TRIM39-201ENST00000376656 VMO1Q7Z5L0 202 aa12.6□□□□□ -0.39
TRIM39-201ENST00000376656 RASL10AQ92737 203 aa12.6□□□□□ -0.39
TRIM39-201ENST00000376656 DLX4Q92988 240 aaPredicted RBP12.6□□□□□ -0.39
TRIM39-201ENST00000376656 IGF1P05019 195 aa12.6□□□□□ -0.39
TRIM39-201ENST00000376656 PSMB2P49721 201 aa12.6□□□□□ -0.39
TRIM39-201ENST00000376656 SUMO2P61956 95 aaKnown RBP12.6□□□□□ -0.39
TRIM39-201ENST00000376656 FHL3Q13643 280 aa12.6□□□□□ -0.39
TRIM39-201ENST00000376656 TMEM95Q3KNT9 176 aa12.6□□□□□ -0.39
TRIM39-201ENST00000376656 C8orf86Q6ZUL3 223 aa12.6□□□□□ -0.39
TRIM39-201ENST00000376656 BAALCQ8WXS3 180 aa12.6□□□□□ -0.39
TRIM39-201ENST00000376656 LOC107984156A0A0G2JMH3 177 aa12.59□□□□□ -0.39
TRIM39-201ENST00000376656 CLEC19AQ6UXS0 136 aa12.59□□□□□ -0.39
TRIM39-201ENST00000376656 ARL17AQ8IVW1 177 aa12.59□□□□□ -0.39
TRIM39-201ENST00000376656 PRSS29PA6NIE9 313 aa12.59□□□□□ -0.39
TRIM39-201ENST00000376656 M0R381 172 aa12.59□□□□□ -0.39
TRIM39-201ENST00000376656 TSPAN13O95857 204 aa12.59□□□□□ -0.39
TRIM39-201ENST00000376656 PTH2Q96A98 100 aa12.59□□□□□ -0.39
TRIM39-201ENST00000376656 TRAV26-1A0A087WT03 109 aa12.59□□□□□ -0.39
TRIM39-201ENST00000376656 SLC25A16P16260 332 aa12.59□□□□□ -0.39
TRIM39-201ENST00000376656 PRR30Q53SZ7 412 aaPredicted RBP12.59□□□□□ -0.39
TRIM39-201ENST00000376656 SCGB1D4Q6XE38 83 aa12.59□□□□□ -0.39
TRIM39-201ENST00000376656 GLMPQ8WWB7 406 aa12.59□□□□□ -0.39
TRIM39-201ENST00000376656 C2orf66Q6UXQ4 117 aa12.58□□□□□ -0.4
TRIM39-201ENST00000376656 C9orf47Q6ZRZ4 202 aa12.58□□□□□ -0.4
TRIM39-201ENST00000376656 Q8N9W7 124 aa12.58□□□□□ -0.4
TRIM39-201ENST00000376656 Q8NA96 180 aa12.58□□□□□ -0.4
TRIM39-201ENST00000376656 ZNF418Q8TF45 676 aaPredicted RBP12.58□□□□□ -0.4
TRIM39-201ENST00000376656 LINC01548A6NM66 108 aa12.58□□□□□ -0.4
TRIM39-201ENST00000376656 M0R1W7 72 aa12.58□□□□□ -0.4
TRIM39-201ENST00000376656 UBE2D1P51668 147 aa12.58□□□□□ -0.4
TRIM39-201ENST00000376656 KLHL30-AS1Q8NEE0 82 aa12.58□□□□□ -0.4
TRIM39-201ENST00000376656 CCDC140Q96MF4 163 aa12.58□□□□□ -0.4
TRIM39-201ENST00000376656 SRSF9Q13242 221 aaKnown RBP eCLIP12.57□□□□□ -0.4
TRIM39-201ENST00000376656 ATP6V0E2Q8NHE4 81 aa12.57□□□□□ -0.4
TRIM39-201ENST00000376656 MT-ATP8P03928 68 aa12.57□□□□□ -0.4
TRIM39-201ENST00000376656 FAM110DQ8TAY7 271 aaPredicted RBP12.57□□□□□ -0.4
TRIM39-201ENST00000376656 GEMIN7Q9H840 131 aaKnown RBP12.57□□□□□ -0.4
TRIM39-201ENST00000376656 C14orf178Q8N769 122 aaPredicted RBP12.57□□□□□ -0.4
TRIM39-201ENST00000376656 RNF223E7ERA6 249 aa12.56□□□□□ -0.4
TRIM39-201ENST00000376656 SPINK8P0C7L1 97 aa12.56□□□□□ -0.4
TRIM39-201ENST00000376656 COX6B1P14854 86 aa12.56□□□□□ -0.4
TRIM39-201ENST00000376656 EBI3Q14213 229 aa12.56□□□□□ -0.4
TRIM39-201ENST00000376656 MED13LQ71F56 2210 aa12.56□□□□□ -0.4
TRIM39-201ENST00000376656 ATP6V0E1O15342 81 aa12.55□□□□□ -0.4
TRIM39-201ENST00000376656 HIF1ANQ9NWT6 349 aa12.55□□□□□ -0.4
TRIM39-201ENST00000376656 GRNP28799 593 aaKnown RBP12.55□□□□□ -0.4
TRIM39-201ENST00000376656 MRPL53Q96EL3 112 aaKnown RBP12.55□□□□□ -0.4
TRIM39-201ENST00000376656 G3V318 75 aa12.55□□□□□ -0.4
TRIM39-201ENST00000376656 CARD19Q96LW7 228 aa12.55□□□□□ -0.4
TRIM39-201ENST00000376656 MGPP08493 103 aa12.54□□□□□ -0.4
TRIM39-201ENST00000376656 CRYBA4P53673 196 aa12.54□□□□□ -0.4
TRIM39-201ENST00000376656 XGP55808 180 aa12.54□□□□□ -0.4
TRIM39-201ENST00000376656 UBE2D3P61077 147 aa12.54□□□□□ -0.4
TRIM39-201ENST00000376656 UBE2D2P62837 147 aa12.54□□□□□ -0.4
TRIM39-201ENST00000376656 CD7P09564 240 aa12.54□□□□□ -0.4
TRIM39-201ENST00000376656 C20orf173Q96LM9 149 aa12.54□□□□□ -0.4
TRIM39-201ENST00000376656 METTL26Q96S19 204 aa12.54□□□□□ -0.4
TRIM39-201ENST00000376656 ANKHD1Q8IWZ3 2542 aaKnown RBP12.54□□□□□ -0.4
TRIM39-201ENST00000376656 EMP1P54849 157 aa12.54□□□□□ -0.4
TRIM39-201ENST00000376656 DEFB104AQ8WTQ1 72 aa12.54□□□□□ -0.4
TRIM39-201ENST00000376656 C16orf92Q96LL3 132 aa12.54□□□□□ -0.4
TRIM39-201ENST00000376656 DPH3P1Q9H4G8 78 aa12.54□□□□□ -0.4
TRIM39-201ENST00000376656 CRYGDP07320 174 aa12.53□□□□□ -0.4
TRIM39-201ENST00000376656 DEFB1P60022 68 aa12.53□□□□□ -0.4
TRIM39-201ENST00000376656 Q6ZUT4 128 aa12.53□□□□□ -0.4
TRIM39-201ENST00000376656 DUSP14O95147 198 aaKnown RBP12.52□□□□□ -0.4
TRIM39-201ENST00000376656 TIMD4Q96H15 378 aa12.52□□□□□ -0.4
TRIM39-201ENST00000376656 S100A4P26447 101 aaKnown RBP12.52□□□□□ -0.41
TRIM39-201ENST00000376656 C11orf86A6NJI1 115 aa12.52□□□□□ -0.41
TRIM39-201ENST00000376656 TCL1BO95988 128 aa12.52□□□□□ -0.41
TRIM39-201ENST00000376656 TGFAP01135 160 aa12.52□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms