RNA–Protein interactions for RNA: ENST00000376545.7

ABCF1-202, Transcript of ATP binding cassette subfamily F member 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene ABCF1, Length 3,131 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF1-202ENST00000376545 H3BUA1 57 aa8.1□□□□□ -1.11
ABCF1-202ENST00000376545 DPM2O94777 84 aa8.1□□□□□ -1.11
ABCF1-202ENST00000376545 UQCRFS1P47985 274 aa8.1□□□□□ -1.11
ABCF1-202ENST00000376545 TMEM219Q86XT9 240 aa8.1□□□□□ -1.11
ABCF1-202ENST00000376545 C19orf84I3L1E1 186 aa8.1□□□□□ -1.11
ABCF1-202ENST00000376545 IGHV4-39P01824 125 aa8.1□□□□□ -1.11
ABCF1-202ENST00000376545 PRSS1P07477 247 aa8.1□□□□□ -1.11
ABCF1-202ENST00000376545 MED14OSP0DP75 135 aa8.1□□□□□ -1.11
ABCF1-202ENST00000376545 NAA38Q9BRA0 125 aaKnown RBP8.1□□□□□ -1.11
ABCF1-202ENST00000376545 SPTAN1Q13813 2472 aaKnown RBP8.1□□□□□ -1.11
ABCF1-202ENST00000376545 TRAV26-2A0A0B4J265 109 aa8.09□□□□□ -1.11
ABCF1-202ENST00000376545 TMEM8BA6NDV4 472 aa8.09□□□□□ -1.11
ABCF1-202ENST00000376545 OVOL1O14753 267 aa8.09□□□□□ -1.11
ABCF1-202ENST00000376545 AZU1P20160 251 aa8.09□□□□□ -1.11
ABCF1-202ENST00000376545 ARL3P36405 182 aa8.09□□□□□ -1.11
ABCF1-202ENST00000376545 SRSF1Q07955 248 aaKnown RBP eCLIP8.09□□□□□ -1.119e-12■■□□□ 14.2
ABCF1-202ENST00000376545 UNQ9165/PRO28630Q6UXU0 137 aa8.09□□□□□ -1.11
ABCF1-202ENST00000376545 FOXC2Q99958 501 aa8.09□□□□□ -1.11
ABCF1-202ENST00000376545 ABCA2Q9BZC7 2435 aa8.09□□□□□ -1.11
ABCF1-202ENST00000376545 WNK2Q9Y3S1 2297 aa8.09□□□□□ -1.11
ABCF1-202ENST00000376545 A0A087WX48 190 aa8.09□□□□□ -1.11
ABCF1-202ENST00000376545 A0A0G2JLM5 398 aa8.09□□□□□ -1.11
ABCF1-202ENST00000376545 TRBV7-9A0A0J9YWB2 115 aa8.09□□□□□ -1.11
ABCF1-202ENST00000376545 GAGE10A6NGK3 116 aa8.09□□□□□ -1.11
ABCF1-202ENST00000376545 K7EP34 96 aa8.09□□□□□ -1.11
ABCF1-202ENST00000376545 SHISA2Q6UWI4 295 aa8.09□□□□□ -1.11
ABCF1-202ENST00000376545 POM121L12Q8N7R1 296 aa8.09□□□□□ -1.11
ABCF1-202ENST00000376545 TRAV12-1A0A0B4J245 112 aa8.09□□□□□ -1.11
ABCF1-202ENST00000376545 K7EMI3 77 aa8.09□□□□□ -1.11
ABCF1-202ENST00000376545 IGHG2P01859 326 aa8.09□□□□□ -1.11
ABCF1-202ENST00000376545 TCTAP57738 103 aa8.09□□□□□ -1.11
ABCF1-202ENST00000376545 SPANXN1Q5VSR9 72 aa8.09□□□□□ -1.11
ABCF1-202ENST00000376545 GTF2H5Q6ZYL4 71 aa8.09□□□□□ -1.11
ABCF1-202ENST00000376545 USMG5Q96IX5 58 aa8.09□□□□□ -1.11
ABCF1-202ENST00000376545 TM2D2Q9BX73 214 aa8.09□□□□□ -1.11
ABCF1-202ENST00000376545 COL6A6A6NMZ7 2263 aa8.08□□□□□ -1.12
ABCF1-202ENST00000376545 RNF223E7ERA6 249 aa8.08□□□□□ -1.12
ABCF1-202ENST00000376545 TRBV12-3P01733 135 aa8.08□□□□□ -1.12
ABCF1-202ENST00000376545 MYOZ3Q8TDC0 251 aa8.08□□□□□ -1.12
ABCF1-202ENST00000376545 PHLDA1Q8WV24 401 aaPredicted RBP8.08□□□□□ -1.12
ABCF1-202ENST00000376545 TRBV25-1A0A075B6N4 114 aa8.08□□□□□ -1.12
ABCF1-202ENST00000376545 H3BUT2 72 aa8.08□□□□□ -1.12
ABCF1-202ENST00000376545 H3BVH4 76 aa8.08□□□□□ -1.12
ABCF1-202ENST00000376545 SLC25A16P16260 332 aa8.08□□□□□ -1.12
ABCF1-202ENST00000376545 C20orf78Q9BR46 151 aa8.08□□□□□ -1.12
ABCF1-202ENST00000376545 SMIM2Q9BVW6 85 aa8.08□□□□□ -1.12
ABCF1-202ENST00000376545 TRAV21A0A0B4J279 112 aa8.07□□□□□ -1.12
ABCF1-202ENST00000376545 A0A1W2PPM0 123 aa8.07□□□□□ -1.12
ABCF1-202ENST00000376545 ZC2HC1BQ5TFG8 222 aa8.07□□□□□ -1.12
ABCF1-202ENST00000376545 MRPL35Q9NZE8 188 aaKnown RBP8.07□□□□□ -1.12
ABCF1-202ENST00000376545 SPTBN4Q9H254 2564 aa8.07□□□□□ -1.12
ABCF1-202ENST00000376545 TRAV40A0A0B4J280 105 aa8.07□□□□□ -1.12
ABCF1-202ENST00000376545 A6NDX4 124 aa8.07□□□□□ -1.12
ABCF1-202ENST00000376545 RASL10AQ92737 203 aa8.07□□□□□ -1.12
ABCF1-202ENST00000376545 TOMM6Q96B49 74 aa8.07□□□□□ -1.12
ABCF1-202ENST00000376545 CHAC1Q9BUX1 264 aa8.07□□□□□ -1.12
ABCF1-202ENST00000376545 PRORYQ9H606 182 aa8.07□□□□□ -1.12
ABCF1-202ENST00000376545 LINC00527Q9UJ94 153 aa8.07□□□□□ -1.12
ABCF1-202ENST00000376545 UFC1Q9Y3C8 167 aa8.07□□□□□ -1.12
ABCF1-202ENST00000376545 IGF2RP11717 2491 aa8.07□□□□□ -1.12
ABCF1-202ENST00000376545 ATRXP46100 2492 aa8.07□□□□□ -1.12
ABCF1-202ENST00000376545 M0R381 172 aa8.07□□□□□ -1.12
ABCF1-202ENST00000376545 NXPH4O95158 308 aa8.07□□□□□ -1.12
ABCF1-202ENST00000376545 GTSCR1Q86UQ5 136 aa8.07□□□□□ -1.12
ABCF1-202ENST00000376545 IGLV1-40P01703 118 aa8.06□□□□□ -1.12
ABCF1-202ENST00000376545 PLNP26678 52 aa8.06□□□□□ -1.12
ABCF1-202ENST00000376545 FXYD2P54710 66 aa8.06□□□□□ -1.12
ABCF1-202ENST00000376545 CKS1BP61024 79 aa8.06□□□□□ -1.12
ABCF1-202ENST00000376545 RPL24P83731 157 aaKnown RBP8.06□□□□□ -1.12
ABCF1-202ENST00000376545 OR10J6PQ8NGY7 276 aa8.06□□□□□ -1.12
ABCF1-202ENST00000376545 TTTY13Q9BZ97 58 aa8.06□□□□□ -1.12
ABCF1-202ENST00000376545 AKAP6Q13023 2319 aa8.06□□□□□ -1.12
ABCF1-202ENST00000376545 HIVEP3Q5T1R4 2406 aa8.06□□□□□ -1.12
ABCF1-202ENST00000376545 LINC01619G3V211 115 aa8.06□□□□□ -1.12
ABCF1-202ENST00000376545 G3V4G9 280 aa8.06□□□□□ -1.12
ABCF1-202ENST00000376545 SMIM13P0DJ93 91 aa8.06□□□□□ -1.12
ABCF1-202ENST00000376545 LY6DQ14210 128 aa8.06□□□□□ -1.12
ABCF1-202ENST00000376545 TAL2Q16559 108 aa8.06□□□□□ -1.12
ABCF1-202ENST00000376545 AP1S3Q96PC3 154 aa8.06□□□□□ -1.12
ABCF1-202ENST00000376545 DPH3P1Q9H4G8 78 aa8.06□□□□□ -1.12
ABCF1-202ENST00000376545 IGHV4-61A0A0C4DH41 118 aa8.05□□□□□ -1.12
ABCF1-202ENST00000376545 CFHR3Q02985 330 aa8.05□□□□□ -1.12
ABCF1-202ENST00000376545 ORMDL2Q53FV1 153 aa8.05□□□□□ -1.12
ABCF1-202ENST00000376545 CEND1Q8N111 149 aa8.05□□□□□ -1.12
ABCF1-202ENST00000376545 MAPKAPK5-AS1Q8N8E1 139 aa8.05□□□□□ -1.12
ABCF1-202ENST00000376545 OR5A1Q8NGJ0 315 aa8.05□□□□□ -1.12
ABCF1-202ENST00000376545 SUMO2P61956 95 aaKnown RBP8.05□□□□□ -1.12
ABCF1-202ENST00000376545 BRD3OSQ6XYD6 125 aa8.05□□□□□ -1.12
ABCF1-202ENST00000376545 NEGR1Q7Z3B1 354 aa8.05□□□□□ -1.12
ABCF1-202ENST00000376545 NEXN-AS1Q8NBZ9 246 aa8.05□□□□□ -1.12
ABCF1-202ENST00000376545 C10orf105Q8TEF2 133 aa8.05□□□□□ -1.12
ABCF1-202ENST00000376545 TMEM160Q9NX00 188 aa8.05□□□□□ -1.12
ABCF1-202ENST00000376545 ZNF580Q9UK33 172 aa8.05□□□□□ -1.12
ABCF1-202ENST00000376545 IGHV3OR16-10A0A075B7F0 116 aa8.05□□□□□ -1.12
ABCF1-202ENST00000376545 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP8.05□□□□□ -1.12
ABCF1-202ENST00000376545 H7C1H1 209 aa8.05□□□□□ -1.12
ABCF1-202ENST00000376545 RNASE3P12724 160 aaKnown RBP8.05□□□□□ -1.12
ABCF1-202ENST00000376545 ANXA2RQ3ZCQ2 193 aa8.05□□□□□ -1.12
ABCF1-202ENST00000376545 F8VRH5 84 aa8.04□□□□□ -1.12
ABCF1-202ENST00000376545 IGHV4-38-2P0DP08 117 aa8.04□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 452.8 ms