RNA–Protein interactions for RNA: ENST00000375274.6

PTCH1-203, Transcript of patched 1, humanhuman

TSL 5 BASIC

Gene PTCH1, Length 4,720 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-203ENST00000375274 RHODO00212 210 aa9.07□□□□□ -0.96
PTCH1-203ENST00000375274 CDKN1BP46527 198 aa9.07□□□□□ -0.96
PTCH1-203ENST00000375274 GATA1P15976 413 aaPredicted RBP9.07□□□□□ -0.96
PTCH1-203ENST00000375274 C12orf74Q32Q52 190 aa9.07□□□□□ -0.96
PTCH1-203ENST00000375274 ZNF295-AS1Q8N0V1 137 aa9.07□□□□□ -0.96
PTCH1-203ENST00000375274 PRO1854Q9UHT4 67 aa9.07□□□□□ -0.96
PTCH1-203ENST00000375274 KLK9Q9UKQ9 250 aa9.07□□□□□ -0.96
PTCH1-203ENST00000375274 OBSL1O75147 1896 aa9.07□□□□□ -0.96
PTCH1-203ENST00000375274 IGHV1OR15-1A0A075B7D0 117 aa9.07□□□□□ -0.96
PTCH1-203ENST00000375274 GAGE12HA6NDE8 117 aa9.07□□□□□ -0.96
PTCH1-203ENST00000375274 IGFL2Q6UWQ7 119 aa9.07□□□□□ -0.96
PTCH1-203ENST00000375274 KLF12Q9Y4X4 402 aa9.07□□□□□ -0.96
PTCH1-203ENST00000375274 I3L3M4 83 aa9.07□□□□□ -0.96
PTCH1-203ENST00000375274 PROP1O75360 226 aa9.07□□□□□ -0.96
PTCH1-203ENST00000375274 PLA2G5P39877 138 aa9.07□□□□□ -0.96
PTCH1-203ENST00000375274 MYO9AB2RTY4 2548 aa9.07□□□□□ -0.96
PTCH1-203ENST00000375274 TRBV25-1A0A075B6N4 114 aa9.06□□□□□ -0.96
PTCH1-203ENST00000375274 MSMBP08118 114 aa9.06□□□□□ -0.96
PTCH1-203ENST00000375274 FGF6P10767 208 aa9.06□□□□□ -0.96
PTCH1-203ENST00000375274 C6orf226Q5I0X4 101 aa9.06□□□□□ -0.96
PTCH1-203ENST00000375274 PRSS33Q8NF86 280 aa9.06□□□□□ -0.96
PTCH1-203ENST00000375274 TECTAO75443 2155 aa9.06□□□□□ -0.96
PTCH1-203ENST00000375274 LGALS1P09382 135 aaKnown RBP9.06□□□□□ -0.96
PTCH1-203ENST00000375274 CMC4P56277 68 aaPredicted RBP9.06□□□□□ -0.96
PTCH1-203ENST00000375274 COL4A4P53420 1690 aaPredicted RBP9.06□□□□□ -0.96
PTCH1-203ENST00000375274 SHISA9B4DS77 424 aa9.06□□□□□ -0.96
PTCH1-203ENST00000375274 LEPROTO15243 131 aa9.06□□□□□ -0.96
PTCH1-203ENST00000375274 SAP30O75446 220 aa9.06□□□□□ -0.96
PTCH1-203ENST00000375274 FOXE3Q13461 319 aa9.06□□□□□ -0.96
PTCH1-203ENST00000375274 KLHL30-AS1Q8NEE0 82 aa9.06□□□□□ -0.96
PTCH1-203ENST00000375274 MSRB1Q9NZV6 116 aa9.06□□□□□ -0.96
PTCH1-203ENST00000375274 MRPL36Q9P0J6 103 aaKnown RBP9.06□□□□□ -0.96
PTCH1-203ENST00000375274 PRSS29PA6NIE9 313 aa9.06□□□□□ -0.96
PTCH1-203ENST00000375274 J3QQQ9 107 aa9.06□□□□□ -0.96
PTCH1-203ENST00000375274 CFHR4Q92496 578 aa9.06□□□□□ -0.96
PTCH1-203ENST00000375274 RITA1Q96K30 269 aa9.06□□□□□ -0.96
PTCH1-203ENST00000375274 C2orf16Q68DN1 1984 aa9.05□□□□□ -0.96
PTCH1-203ENST00000375274 TRAV12-2A0A075B6T6 113 aa9.05□□□□□ -0.96
PTCH1-203ENST00000375274 E7EUB6 86 aa9.05□□□□□ -0.96
PTCH1-203ENST00000375274 TCF15Q12870 199 aa9.05□□□□□ -0.96
PTCH1-203ENST00000375274 S100A7L2Q5SY68 101 aa9.05□□□□□ -0.96
PTCH1-203ENST00000375274 RNASE8Q8TDE3 154 aaKnown RBP9.05□□□□□ -0.96
PTCH1-203ENST00000375274 C11orf68Q9H3H3 251 aaKnown RBP9.05□□□□□ -0.96
PTCH1-203ENST00000375274 JPT2Q9H910 190 aa9.05□□□□□ -0.96
PTCH1-203ENST00000375274 LENEPQ9Y5L5 61 aa9.05□□□□□ -0.96
PTCH1-203ENST00000375274 BRWD1-AS2P59051 145 aa9.05□□□□□ -0.96
PTCH1-203ENST00000375274 ZNF493Q6ZR52 646 aa9.05□□□□□ -0.96
PTCH1-203ENST00000375274 NDUFA12Q9UI09 145 aa9.05□□□□□ -0.96
PTCH1-203ENST00000375274 INS-IGF2F8WCM5 200 aa9.05□□□□□ -0.96
PTCH1-203ENST00000375274 CR1LQ2VPA4 569 aa9.05□□□□□ -0.96
PTCH1-203ENST00000375274 SCRT2Q9NQ03 307 aa9.05□□□□□ -0.96
PTCH1-203ENST00000375274 H3BMM0 161 aa9.04□□□□□ -0.96
PTCH1-203ENST00000375274 PIP4P1Q86T03 277 aa9.04□□□□□ -0.96
PTCH1-203ENST00000375274 UBE2WQ96B02 151 aa9.04□□□□□ -0.96
PTCH1-203ENST00000375274 PIEZO2Q9H5I5 2752 aa9.04□□□□□ -0.96
PTCH1-203ENST00000375274 SPRY4Q9C004 299 aa9.04□□□□□ -0.96
PTCH1-203ENST00000375274 RBAKDNA6NC62 111 aa9.03□□□□□ -0.96
PTCH1-203ENST00000375274 F6UB75 175 aa9.03□□□□□ -0.96
PTCH1-203ENST00000375274 MSMPQ1L6U9 139 aa9.03□□□□□ -0.96
PTCH1-203ENST00000375274 XCL2Q9UBD3 114 aa9.03□□□□□ -0.96
PTCH1-203ENST00000375274 AZU1P20160 251 aa9.03□□□□□ -0.96
PTCH1-203ENST00000375274 IGLV11-55A0A075B6I3 123 aa9.03□□□□□ -0.96
PTCH1-203ENST00000375274 K7EMI3 77 aa9.03□□□□□ -0.96
PTCH1-203ENST00000375274 IGFBPL1Q8WX77 278 aa9.03□□□□□ -0.96
PTCH1-203ENST00000375274 ZNF503Q96F45 646 aa9.03□□□□□ -0.96
PTCH1-203ENST00000375274 C1QTNF4Q9BXJ3 329 aa9.03□□□□□ -0.96
PTCH1-203ENST00000375274 IGHV3-16A0A0C4DH30 117 aa9.03□□□□□ -0.96
PTCH1-203ENST00000375274 MRPL53Q96EL3 112 aaKnown RBP9.03□□□□□ -0.96
PTCH1-203ENST00000375274 ADAMTS9Q9P2N4 1935 aa9.03□□□□□ -0.96
PTCH1-203ENST00000375274 OTOGLQ3ZCN5 2332 aa9.02□□□□□ -0.96
PTCH1-203ENST00000375274 IGHV7-4-1A0A0J9YVY3 117 aa9.02□□□□□ -0.96
PTCH1-203ENST00000375274 TEX48A0A1B0GUV7 120 aa9.02□□□□□ -0.96
PTCH1-203ENST00000375274 CTSGP08311 255 aa9.02□□□□□ -0.96
PTCH1-203ENST00000375274 RPL35AP18077 110 aaKnown RBP9.02□□□□□ -0.96
PTCH1-203ENST00000375274 HIST1H4AP62805 103 aaKnown RBP9.02□□□□□ -0.96
PTCH1-203ENST00000375274 GNRH2O43555 120 aa9.02□□□□□ -0.97
PTCH1-203ENST00000375274 GATA3P23771 443 aa9.02□□□□□ -0.97
PTCH1-203ENST00000375274 LINC01356Q8N9X3 169 aa9.02□□□□□ -0.97
PTCH1-203ENST00000375274 TAX1BP3O14907 124 aa9.02□□□□□ -0.97
PTCH1-203ENST00000375274 SPRY2O43597 315 aa9.02□□□□□ -0.97
PTCH1-203ENST00000375274 TCTEX1D4Q5JR98 221 aa9.02□□□□□ -0.97
PTCH1-203ENST00000375274 YPEL4Q96NS1 127 aa9.02□□□□□ -0.97
PTCH1-203ENST00000375274 OVOL2Q9BRP0 275 aa9.02□□□□□ -0.97
PTCH1-203ENST00000375274 KIAA1549LQ6ZVL6 1849 aa9.02□□□□□ -0.97
PTCH1-203ENST00000375274 NCKAP5O14513 1909 aa9.02□□□□□ -0.97
PTCH1-203ENST00000375274 IGHV7-81A0A0B4J1V7 117 aa9.02□□□□□ -0.97
PTCH1-203ENST00000375274 NSUN5P1Q3KNT7 163 aa9.02□□□□□ -0.97
PTCH1-203ENST00000375274 IGLV1-47P01700 117 aa9.01□□□□□ -0.97
PTCH1-203ENST00000375274 GAGE2AQ6NT46 116 aa9.01□□□□□ -0.97
PTCH1-203ENST00000375274 TTTY13Q9BZ97 58 aa9.01□□□□□ -0.97
PTCH1-203ENST00000375274 C2orf70A6NJV1 201 aa9.01□□□□□ -0.97
PTCH1-203ENST00000375274 IGLV2-23P01705 113 aa9.01□□□□□ -0.97
PTCH1-203ENST00000375274 CENPFP49454 3210 aa9.01□□□□□ -0.97
PTCH1-203ENST00000375274 SEM1Q6ZVN7 128 aa9.01□□□□□ -0.97
PTCH1-203ENST00000375274 A0A1W2PNU3 283 aaPredicted RBP9□□□□□ -0.97
PTCH1-203ENST00000375274 BUB3O43684 328 aa9□□□□□ -0.97
PTCH1-203ENST00000375274 GRNP28799 593 aaKnown RBP9□□□□□ -0.97
PTCH1-203ENST00000375274 SORL1Q92673 2214 aa9□□□□□ -0.97
PTCH1-203ENST00000375274 GAGE12JA6NER3 117 aa9□□□□□ -0.97
PTCH1-203ENST00000375274 TEX22C9J3V5 150 aa9□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms