RNA–Protein interactions for RNA: ENST00000374879.4

TMEFF1-201, Transcript of transmembrane protein with EGF like and two follistatin like domains 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMEFF1, Length 2,611 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEFF1-201ENST00000374879 SRSF2Q01130 221 aaKnown RBP15.86■□□□□ 0.13
TMEFF1-201ENST00000374879 ZGRF1Q86YA3 2104 aa15.86■□□□□ 0.13
TMEFF1-201ENST00000374879 CEP250Q9BV73 2442 aa15.86■□□□□ 0.13
TMEFF1-201ENST00000374879 CENPVL3A0A0U1RRI6 287 aa15.86■□□□□ 0.13
TMEFF1-201ENST00000374879 ONECUT1Q9UBC0 465 aa15.86■□□□□ 0.13
TMEFF1-201ENST00000374879 CCL8P80075 99 aa15.85■□□□□ 0.13
TMEFF1-201ENST00000374879 IGFL3Q6UXB1 125 aa15.85■□□□□ 0.13
TMEFF1-201ENST00000374879 C9JAW5 83 aa15.85■□□□□ 0.13
TMEFF1-201ENST00000374879 IGHG4P01861 327 aa15.85■□□□□ 0.13
TMEFF1-201ENST00000374879 DLX1P56177 255 aa15.85■□□□□ 0.13
TMEFF1-201ENST00000374879 PRB3Q04118 309 aaPredicted RBP15.85■□□□□ 0.13
TMEFF1-201ENST00000374879 ERCC8Q13216 396 aa15.85■□□□□ 0.13
TMEFF1-201ENST00000374879 CFHR4Q92496 578 aa15.85■□□□□ 0.13
TMEFF1-201ENST00000374879 MALRD1Q5VYJ5 2156 aa15.85■□□□□ 0.13
TMEFF1-201ENST00000374879 RASL10AQ92737 203 aa15.84■□□□□ 0.13
TMEFF1-201ENST00000374879 TRPT1Q86TN4 253 aaKnown RBP15.83■□□□□ 0.13
TMEFF1-201ENST00000374879 ADGRG4Q8IZF6 3080 aa15.83■□□□□ 0.13
TMEFF1-201ENST00000374879 C10orf126Q8N4M7 172 aa15.83■□□□□ 0.12
TMEFF1-201ENST00000374879 C8orf31Q8N9H6 132 aa15.83■□□□□ 0.12
TMEFF1-201ENST00000374879 IGKV3D-20A0A0C4DH25 116 aa15.82■□□□□ 0.12
TMEFF1-201ENST00000374879 ZNF672Q499Z4 452 aaPredicted RBP15.82■□□□□ 0.12
TMEFF1-201ENST00000374879 IL17RELQ6ZVW7 336 aa15.82■□□□□ 0.12
TMEFF1-201ENST00000374879 IGF2-ASQ6U949 168 aa15.82■□□□□ 0.12
TMEFF1-201ENST00000374879 C1orf122Q6ZSJ8 110 aa15.82■□□□□ 0.12
TMEFF1-201ENST00000374879 A0A0J9YY99 117 aa15.81■□□□□ 0.12
TMEFF1-201ENST00000374879 Q6Q795 121 aa15.81■□□□□ 0.12
TMEFF1-201ENST00000374879 LYPD2Q6UXB3 125 aa15.81■□□□□ 0.12
TMEFF1-201ENST00000374879 MEIG1Q5JSS6 88 aa15.81■□□□□ 0.12
TMEFF1-201ENST00000374879 Q6ZS46 218 aa15.81■□□□□ 0.12
TMEFF1-201ENST00000374879 BAALCQ8WXS3 180 aa15.81■□□□□ 0.12
TMEFF1-201ENST00000374879 TOMM6Q96B49 74 aa15.81■□□□□ 0.12
TMEFF1-201ENST00000374879 C11orf21Q9P2W6 132 aa15.81■□□□□ 0.12
TMEFF1-201ENST00000374879 DYNAPQ8N1N2 210 aa15.81■□□□□ 0.12
TMEFF1-201ENST00000374879 Q8N1Y9 231 aa15.81■□□□□ 0.12
TMEFF1-201ENST00000374879 NTN5Q8WTR8 489 aaPredicted RBP15.81■□□□□ 0.12
TMEFF1-201ENST00000374879 ARL3P36405 182 aa15.8■□□□□ 0.12
TMEFF1-201ENST00000374879 GFRALQ6UXV0 394 aa15.8■□□□□ 0.12
TMEFF1-201ENST00000374879 ODF3Q96PU9 254 aa15.8■□□□□ 0.12
TMEFF1-201ENST00000374879 SMIM2Q9BVW6 85 aa15.8■□□□□ 0.12
TMEFF1-201ENST00000374879 PRSS33Q8NF86 280 aa15.8■□□□□ 0.12
TMEFF1-201ENST00000374879 PRO1854Q9UHT4 67 aa15.8■□□□□ 0.12
TMEFF1-201ENST00000374879 SMAD5-AS1Q9Y6J3 95 aa15.8■□□□□ 0.12
TMEFF1-201ENST00000374879 RIF1Q5UIP0 2472 aaKnown RBP15.79■□□□□ 0.12
TMEFF1-201ENST00000374879 PRAC2D3DTV9 90 aa15.79■□□□□ 0.12
TMEFF1-201ENST00000374879 IGHV3-30P01768 117 aa15.79■□□□□ 0.12
TMEFF1-201ENST00000374879 IGHV3-30-5P0DP03 117 aa15.79■□□□□ 0.12
TMEFF1-201ENST00000374879 NUP37Q8NFH4 326 aa15.79■□□□□ 0.12
TMEFF1-201ENST00000374879 ROS1P08922 2347 aa15.78■□□□□ 0.12
TMEFF1-201ENST00000374879 IGHV1-8P0DP01 117 aa15.78■□□□□ 0.12
TMEFF1-201ENST00000374879 DLX6P56179 175 aa15.78■□□□□ 0.12
TMEFF1-201ENST00000374879 C15orf53Q8NAA6 179 aa15.78■□□□□ 0.12
TMEFF1-201ENST00000374879 FAM57AQ8TBR7 257 aa15.78■□□□□ 0.12
TMEFF1-201ENST00000374879 RELNP78509 3460 aa15.78■□□□□ 0.12
TMEFF1-201ENST00000374879 SCGB2A1O75556 95 aa15.78■□□□□ 0.12
TMEFF1-201ENST00000374879 RPL7P18124 248 aaKnown RBP15.77■□□□□ 0.12
TMEFF1-201ENST00000374879 C3orf56Q8N813 242 aa15.77■□□□□ 0.11
TMEFF1-201ENST00000374879 CSMD1Q96PZ7 3565 aa15.76■□□□□ 0.11
TMEFF1-201ENST00000374879 IGHV1-3A0A0C4DH29 117 aa15.76■□□□□ 0.11
TMEFF1-201ENST00000374879 IGHV7-4-1A0A0J9YVY3 117 aa15.76■□□□□ 0.11
TMEFF1-201ENST00000374879 C17orf100A8MU93 164 aa15.76■□□□□ 0.11
TMEFF1-201ENST00000374879 NDUFB3O43676 98 aa15.76■□□□□ 0.11
TMEFF1-201ENST00000374879 ADIPOQQ15848 244 aa15.76■□□□□ 0.11
TMEFF1-201ENST00000374879 ORMDL2Q53FV1 153 aa15.76■□□□□ 0.11
TMEFF1-201ENST00000374879 PPDPFQ9H3Y8 114 aa15.76■□□□□ 0.11
TMEFF1-201ENST00000374879 AKAP13Q12802 2813 aa15.76■□□□□ 0.11
TMEFF1-201ENST00000374879 M0QXV9 152 aa15.76■□□□□ 0.11
TMEFF1-201ENST00000374879 VPREB3Q9UKI3 123 aa15.76■□□□□ 0.11
TMEFF1-201ENST00000374879 TEX49A0A1B0GTD5 131 aa15.75■□□□□ 0.11
TMEFF1-201ENST00000374879 ID1P41134 155 aa15.75■□□□□ 0.11
TMEFF1-201ENST00000374879 LOXP28300 417 aaPredicted RBP15.75■□□□□ 0.11
TMEFF1-201ENST00000374879 EMP1P54849 157 aa15.75■□□□□ 0.11
TMEFF1-201ENST00000374879 TMEM155Q4W5P6 130 aa15.75■□□□□ 0.11
TMEFF1-201ENST00000374879 C2orf66Q6UXQ4 117 aa15.75■□□□□ 0.11
TMEFF1-201ENST00000374879 TRAV8-4A0A0B4J246 113 aa15.74■□□□□ 0.11
TMEFF1-201ENST00000374879 PRR30Q53SZ7 412 aaPredicted RBP15.74■□□□□ 0.11
TMEFF1-201ENST00000374879 SPANXN1Q5VSR9 72 aa15.74■□□□□ 0.11
TMEFF1-201ENST00000374879 OR10J6PQ8NGY7 276 aa15.74■□□□□ 0.11
TMEFF1-201ENST00000374879 BSNQ9UPA5 3926 aa15.74■□□□□ 0.11
TMEFF1-201ENST00000374879 A0A0G2JNJ9 132 aa15.73■□□□□ 0.11
TMEFF1-201ENST00000374879 H7C2G1 150 aa15.73■□□□□ 0.11
TMEFF1-201ENST00000374879 BSPH1Q075Z2 132 aa15.73■□□□□ 0.11
TMEFF1-201ENST00000374879 CCL17Q92583 94 aa15.73■□□□□ 0.11
TMEFF1-201ENST00000374879 Q9UFV3 132 aa15.73■□□□□ 0.11
TMEFF1-201ENST00000374879 IGHV3OR16-8A0A075B7F1 116 aa15.73■□□□□ 0.11
TMEFF1-201ENST00000374879 C11orf86A6NJI1 115 aa15.73■□□□□ 0.11
TMEFF1-201ENST00000374879 EIF4EBP3O60516 100 aaPredicted RBP15.73■□□□□ 0.11
TMEFF1-201ENST00000374879 IGHV3-23P01764 117 aa15.73■□□□□ 0.11
TMEFF1-201ENST00000374879 RAB1BQ9H0U4 201 aa15.73■□□□□ 0.11
TMEFF1-201ENST00000374879 YAE1D1Q9NRH1 226 aa15.73■□□□□ 0.11
TMEFF1-201ENST00000374879 MDFICQ9P1T7 246 aa15.73■□□□□ 0.11
TMEFF1-201ENST00000374879 RNF182Q8N6D2 247 aa15.72■□□□□ 0.11
TMEFF1-201ENST00000374879 SLC25A29Q8N8R3 303 aa15.72■□□□□ 0.11
TMEFF1-201ENST00000374879 CRYGDP07320 174 aa15.72■□□□□ 0.11
TMEFF1-201ENST00000374879 ELANEP08246 267 aa15.72■□□□□ 0.11
TMEFF1-201ENST00000374879 TSPEAR-AS2P59090 65 aa15.72■□□□□ 0.11
TMEFF1-201ENST00000374879 SUMO2P61956 95 aaKnown RBP15.72■□□□□ 0.11
TMEFF1-201ENST00000374879 CUL9Q8IWT3 2517 aa15.72■□□□□ 0.11
TMEFF1-201ENST00000374879 ZFHX2Q9C0A1 2572 aaPredicted RBP15.71■□□□□ 0.11
TMEFF1-201ENST00000374879 PIEZO2Q9H5I5 2752 aa15.71■□□□□ 0.11
TMEFF1-201ENST00000374879 F8W735 103 aaPredicted RBP15.71■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms