RNA–Protein interactions for RNA: ENST00000374837.7

MAP1LC3A-202, Transcript of microtubule associated protein 1 light chain 3 alpha, humanhuman

TSL 3 BASIC

Gene MAP1LC3A, Length 961 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MAP1LC3A-202ENST00000374837 Q86TA4 180 aa14.8□□□□□ -0.04
MAP1LC3A-202ENST00000374837 FAM210BQ96KR6 192 aa14.8□□□□□ -0.04
MAP1LC3A-202ENST00000374837 NDUFAF3Q9BU61 184 aa14.8□□□□□ -0.04
MAP1LC3A-202ENST00000374837 GNG13Q9P2W3 67 aa14.8□□□□□ -0.04
MAP1LC3A-202ENST00000374837 C11orf21Q9P2W6 132 aa14.8□□□□□ -0.04
MAP1LC3A-202ENST00000374837 TRGV11A0A075B6L2 103 aa14.79□□□□□ -0.04
MAP1LC3A-202ENST00000374837 TRGV1A0A0A0MS02 117 aa14.79□□□□□ -0.04
MAP1LC3A-202ENST00000374837 F5H768 121 aa14.79□□□□□ -0.04
MAP1LC3A-202ENST00000374837 PFN1P07737 140 aaKnown RBP14.79□□□□□ -0.04
MAP1LC3A-202ENST00000374837 AKR1C3P42330 323 aa14.79□□□□□ -0.04
MAP1LC3A-202ENST00000374837 ZNF415Q09FC8 603 aa14.79□□□□□ -0.04
MAP1LC3A-202ENST00000374837 ALKAL2Q6UX46 152 aa14.79□□□□□ -0.04
MAP1LC3A-202ENST00000374837 FMC1Q96HJ9 113 aa14.79□□□□□ -0.04
MAP1LC3A-202ENST00000374837 MANBALQ9NQG1 85 aa14.79□□□□□ -0.04
MAP1LC3A-202ENST00000374837 ALMS1Q8TCU4 4167 aa14.79□□□□□ -0.04
MAP1LC3A-202ENST00000374837 TRBV6-1A0A0K0K1D8 114 aa14.78□□□□□ -0.04
MAP1LC3A-202ENST00000374837 SCO2A0A1W2PP80 73 aa14.78□□□□□ -0.04
MAP1LC3A-202ENST00000374837 UBE2G1P62253 170 aa14.78□□□□□ -0.04
MAP1LC3A-202ENST00000374837 LGALS9CQ6DKI2 356 aa14.78□□□□□ -0.04
MAP1LC3A-202ENST00000374837 TMEM88Q6PEY1 159 aa14.78□□□□□ -0.04
MAP1LC3A-202ENST00000374837 ZFP30Q9Y2G7 519 aa14.78□□□□□ -0.04
MAP1LC3A-202ENST00000374837 TYMSP04818 313 aa14.77□□□□□ -0.05
MAP1LC3A-202ENST00000374837 KCNS1Q96KK3 526 aa14.77□□□□□ -0.05
MAP1LC3A-202ENST00000374837 SDF2L1Q9HCN8 221 aa14.77□□□□□ -0.05
MAP1LC3A-202ENST00000374837 IGHV3-16A0A0C4DH30 117 aa14.76□□□□□ -0.05
MAP1LC3A-202ENST00000374837 LGALS9BQ3B8N2 356 aa14.76□□□□□ -0.05
MAP1LC3A-202ENST00000374837 SPXQ9BT56 116 aa14.76□□□□□ -0.05
MAP1LC3A-202ENST00000374837 MRPL16Q9NX20 251 aaKnown RBP14.76□□□□□ -0.05
MAP1LC3A-202ENST00000374837 TRGV2A0A075B6R0 118 aa14.75□□□□□ -0.05
MAP1LC3A-202ENST00000374837 LTAP01374 205 aa14.75□□□□□ -0.05
MAP1LC3A-202ENST00000374837 S100A9P06702 114 aaKnown RBP14.75□□□□□ -0.05
MAP1LC3A-202ENST00000374837 CRIP1P50238 77 aa14.75□□□□□ -0.05
MAP1LC3A-202ENST00000374837 COX8CQ7Z4L0 72 aa14.75□□□□□ -0.05
MAP1LC3A-202ENST00000374837 C18orf15Q96N68 181 aa14.75□□□□□ -0.05
MAP1LC3A-202ENST00000374837 FABP5P3A8MUU1 101 aa14.74□□□□□ -0.05
MAP1LC3A-202ENST00000374837 ZC2HC1AQ96GY0 325 aa14.74□□□□□ -0.05
MAP1LC3A-202ENST00000374837 HOXA5P20719 270 aa14.73□□□□□ -0.05
MAP1LC3A-202ENST00000374837 BLOC1S1P78537 153 aa14.73□□□□□ -0.05
MAP1LC3A-202ENST00000374837 OR5I1Q13606 314 aa14.73□□□□□ -0.05
MAP1LC3A-202ENST00000374837 TXNDC17Q9BRA2 123 aa14.73□□□□□ -0.05
MAP1LC3A-202ENST00000374837 IGKV3D-20A0A0C4DH25 116 aa14.72□□□□□ -0.05
MAP1LC3A-202ENST00000374837 IFNA1P01562 189 aa14.72□□□□□ -0.05
MAP1LC3A-202ENST00000374837 C11orf52Q96A22 123 aa14.72□□□□□ -0.05
MAP1LC3A-202ENST00000374837 BAGE2Q86Y30 109 aa14.71□□□□□ -0.05
MAP1LC3A-202ENST00000374837 NHLRC2Q8NBF2 726 aa14.71□□□□□ -0.05
MAP1LC3A-202ENST00000374837 RASL10AQ92737 203 aa14.71□□□□□ -0.05
MAP1LC3A-202ENST00000374837 SH2D1AO60880 128 aa14.7□□□□□ -0.06
MAP1LC3A-202ENST00000374837 BCL2P10415 239 aa14.7□□□□□ -0.06
MAP1LC3A-202ENST00000374837 ZNF674Q2M3X9 581 aa14.7□□□□□ -0.06
MAP1LC3A-202ENST00000374837 C15orf53Q8NAA6 179 aa14.7□□□□□ -0.06
MAP1LC3A-202ENST00000374837 M0R2P5 195 aa14.69□□□□□ -0.06
MAP1LC3A-202ENST00000374837 IGHV3-53P01767 116 aa14.69□□□□□ -0.06
MAP1LC3A-202ENST00000374837 ORM1P02763 201 aa14.69□□□□□ -0.06
MAP1LC3A-202ENST00000374837 RPL35P42766 123 aaKnown RBP14.69□□□□□ -0.06
MAP1LC3A-202ENST00000374837 MEF2BQ02080 365 aaPredicted RBP14.69□□□□□ -0.06
MAP1LC3A-202ENST00000374837 FAM162BQ5T6X4 162 aa14.69□□□□□ -0.06
MAP1LC3A-202ENST00000374837 DERL1Q9BUN8 251 aa14.69□□□□□ -0.06
MAP1LC3A-202ENST00000374837 VAX2Q9UIW0 290 aa14.69□□□□□ -0.06
MAP1LC3A-202ENST00000374837 TRAV26-1A0A087WT03 109 aa14.68□□□□□ -0.06
MAP1LC3A-202ENST00000374837 P0DMU3 169 aa14.68□□□□□ -0.06
MAP1LC3A-202ENST00000374837 FAM231AP0DMU4 169 aa14.68□□□□□ -0.06
MAP1LC3A-202ENST00000374837 FAM231CP0DMU5 169 aa14.68□□□□□ -0.06
MAP1LC3A-202ENST00000374837 LYPD6BQ8NI32 183 aa14.68□□□□□ -0.06
MAP1LC3A-202ENST00000374837 C9orf85Q96MD7 179 aa14.68□□□□□ -0.06
MAP1LC3A-202ENST00000374837 MLST8Q9BVC4 326 aa14.68□□□□□ -0.06
MAP1LC3A-202ENST00000374837 HYDINQ4G0P3 5121 aa14.68□□□□□ -0.06
MAP1LC3A-202ENST00000374837 A0A0J9YY99 117 aa14.67□□□□□ -0.06
MAP1LC3A-202ENST00000374837 PDE6DO43924 150 aa14.67□□□□□ -0.06
MAP1LC3A-202ENST00000374837 NUDT3O95989 172 aa14.67□□□□□ -0.06
MAP1LC3A-202ENST00000374837 RNASE3P12724 160 aaKnown RBP14.67□□□□□ -0.06
MAP1LC3A-202ENST00000374837 TAGLN2P37802 199 aaKnown RBP14.67□□□□□ -0.06
MAP1LC3A-202ENST00000374837 B4DEV8 164 aa14.66□□□□□ -0.06
MAP1LC3A-202ENST00000374837 KRBOX1C9JBD0 128 aa14.66□□□□□ -0.06
MAP1LC3A-202ENST00000374837 POM121L12Q8N7R1 296 aa14.66□□□□□ -0.06
MAP1LC3A-202ENST00000374837 VPS13DQ5THJ4 4388 aa14.65□□□□□ -0.06
MAP1LC3A-202ENST00000374837 M0R036 132 aa14.65□□□□□ -0.06
MAP1LC3A-202ENST00000374837 FHL2Q14192 279 aa14.65□□□□□ -0.06
MAP1LC3A-202ENST00000374837 ZNF575Q86XF7 245 aa14.65□□□□□ -0.06
MAP1LC3A-202ENST00000374837 ZNF479Q96JC4 524 aa14.65□□□□□ -0.06
MAP1LC3A-202ENST00000374837 MED9Q9NWA0 146 aa14.65□□□□□ -0.06
MAP1LC3A-202ENST00000374837 RAB19A4D1S5 217 aa14.64□□□□□ -0.07
MAP1LC3A-202ENST00000374837 C9JCJ5 164 aa14.64□□□□□ -0.07
MAP1LC3A-202ENST00000374837 SFTA3P0C7M3 94 aa14.64□□□□□ -0.07
MAP1LC3A-202ENST00000374837 S100A4P26447 101 aaKnown RBP14.64□□□□□ -0.07
MAP1LC3A-202ENST00000374837 ASIPP42127 132 aa14.64□□□□□ -0.07
MAP1LC3A-202ENST00000374837 LINC01559Q495D7 138 aa14.64□□□□□ -0.07
MAP1LC3A-202ENST00000374837 VSIG2Q96IQ7 327 aa14.64□□□□□ -0.07
MAP1LC3A-202ENST00000374837 GRIFINA4D1Z8 144 aa14.63□□□□□ -0.07
MAP1LC3A-202ENST00000374837 H3BNG1 76 aa14.63□□□□□ -0.07
MAP1LC3A-202ENST00000374837 ZNF876PQ49A33 203 aa14.63□□□□□ -0.07
MAP1LC3A-202ENST00000374837 CENPWQ5EE01 88 aa14.63□□□□□ -0.07
MAP1LC3A-202ENST00000374837 PTH2Q96A98 100 aa14.63□□□□□ -0.07
MAP1LC3A-202ENST00000374837 TMSB15BA0A087X1C1 80 aa14.62□□□□□ -0.07
MAP1LC3A-202ENST00000374837 TRAV4A0A0B4J268 109 aa14.62□□□□□ -0.07
MAP1LC3A-202ENST00000374837 RBFOX3A6NFN3 312 aa14.62□□□□□ -0.07
MAP1LC3A-202ENST00000374837 PGPEP1LA6NFU8 196 aa14.62□□□□□ -0.07
MAP1LC3A-202ENST00000374837 DNLZQ5SXM8 178 aa14.62□□□□□ -0.07
MAP1LC3A-202ENST00000374837 OR4C5Q8NGB2 326 aa14.62□□□□□ -0.07
MAP1LC3A-202ENST00000374837 IGLV2-8P01709 118 aa14.61□□□□□ -0.07
MAP1LC3A-202ENST00000374837 SLAQ13239 276 aa14.61□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 115.1 ms