RNA–Protein interactions for RNA: ENST00000373162.5

TRAPPC3-202, Transcript of trafficking protein particle complex 3, humanhuman

TSL 2 BASIC

Gene TRAPPC3, Length 1,056 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC3-202ENST00000373162 SERTM2A0A1B0GWG4 89 aa12.33□□□□□ -0.44
TRAPPC3-202ENST00000373162 F6UZH7 168 aa12.33□□□□□ -0.44
TRAPPC3-202ENST00000373162 MBP02144 154 aa12.33□□□□□ -0.44
TRAPPC3-202ENST00000373162 TTC32Q5I0X7 151 aa12.33□□□□□ -0.44
TRAPPC3-202ENST00000373162 FAM159AQ6UWV7 190 aa12.33□□□□□ -0.44
TRAPPC3-202ENST00000373162 ZNF479Q96JC4 524 aa12.33□□□□□ -0.44
TRAPPC3-202ENST00000373162 C11orf21Q9P2W6 132 aa12.33□□□□□ -0.44
TRAPPC3-202ENST00000373162 RPH3ALQ9UNE2 315 aa12.33□□□□□ -0.44
TRAPPC3-202ENST00000373162 TRAV21A0A0B4J279 112 aa12.32□□□□□ -0.44
TRAPPC3-202ENST00000373162 PAX4O43316 350 aa12.32□□□□□ -0.44
TRAPPC3-202ENST00000373162 GNRH2O43555 120 aa12.32□□□□□ -0.44
TRAPPC3-202ENST00000373162 TYMSP04818 313 aa12.32□□□□□ -0.44
TRAPPC3-202ENST00000373162 BTF3P20290 206 aaKnown RBP12.32□□□□□ -0.44
TRAPPC3-202ENST00000373162 ZNF80P51504 273 aaPredicted RBP12.32□□□□□ -0.44
TRAPPC3-202ENST00000373162 Q6ZRN7 208 aaPredicted RBP12.32□□□□□ -0.44
TRAPPC3-202ENST00000373162 KCNRGQ8N5I3 272 aa12.32□□□□□ -0.44
TRAPPC3-202ENST00000373162 TREM1Q9NP99 234 aa12.32□□□□□ -0.44
TRAPPC3-202ENST00000373162 ICOSQ9Y6W8 199 aa12.32□□□□□ -0.44
TRAPPC3-202ENST00000373162 A0A0D9SG52 128 aa12.31□□□□□ -0.44
TRAPPC3-202ENST00000373162 TAAR5O14804 337 aa12.31□□□□□ -0.44
TRAPPC3-202ENST00000373162 SFTA3P0C7M3 94 aa12.31□□□□□ -0.44
TRAPPC3-202ENST00000373162 SLAQ13239 276 aa12.31□□□□□ -0.44
TRAPPC3-202ENST00000373162 C8orf49Q96NF6 230 aa12.31□□□□□ -0.44
TRAPPC3-202ENST00000373162 HHLA3Q9XRX5 114 aa12.31□□□□□ -0.44
TRAPPC3-202ENST00000373162 BORCS7-ASMTA0A0B4J1R7 106 aa12.3□□□□□ -0.44
TRAPPC3-202ENST00000373162 CXorf1O96002 111 aa12.3□□□□□ -0.44
TRAPPC3-202ENST00000373162 ZFP69Q49AA0 526 aa12.3□□□□□ -0.44
TRAPPC3-202ENST00000373162 SGK494Q96LW2 274 aa12.3□□□□□ -0.44
TRAPPC3-202ENST00000373162 CYTL1Q9NRR1 136 aa12.3□□□□□ -0.44
TRAPPC3-202ENST00000373162 TMEM167BQ9NRX6 74 aa12.3□□□□□ -0.44
TRAPPC3-202ENST00000373162 HSPG2P98160 4391 aa12.3□□□□□ -0.44
TRAPPC3-202ENST00000373162 TRAV4A0A0B4J268 109 aa12.29□□□□□ -0.44
TRAPPC3-202ENST00000373162 ACTR3CQ9C0K3 210 aaPredicted RBP12.29□□□□□ -0.44
TRAPPC3-202ENST00000373162 EPDR1Q9UM22 224 aa12.29□□□□□ -0.44
TRAPPC3-202ENST00000373162 PSG8Q9UQ74 426 aa12.29□□□□□ -0.44
TRAPPC3-202ENST00000373162 A0A1W2PRE2 83 aa12.28□□□□□ -0.44
TRAPPC3-202ENST00000373162 M0R2P5 195 aa12.28□□□□□ -0.44
TRAPPC3-202ENST00000373162 SUMO1P63165 101 aaKnown RBP12.28□□□□□ -0.44
TRAPPC3-202ENST00000373162 LYPD5Q6UWN5 251 aa12.28□□□□□ -0.44
TRAPPC3-202ENST00000373162 TMUB2Q71RG4 321 aa12.28□□□□□ -0.44
TRAPPC3-202ENST00000373162 TMEM75Q8N9X5 138 aa12.28□□□□□ -0.44
TRAPPC3-202ENST00000373162 NAGKQ9UJ70 344 aa12.28□□□□□ -0.44
TRAPPC3-202ENST00000373162 DNAH5Q8TE73 4624 aa12.27□□□□□ -0.44
TRAPPC3-202ENST00000373162 CTXND1A0A1B0GTU2 59 aa12.27□□□□□ -0.45
TRAPPC3-202ENST00000373162 KANTRA0A1W2PQU2 76 aa12.27□□□□□ -0.45
TRAPPC3-202ENST00000373162 K7EQD1 137 aa12.27□□□□□ -0.45
TRAPPC3-202ENST00000373162 BCL2L11O43521 198 aa12.27□□□□□ -0.45
TRAPPC3-202ENST00000373162 PFDN1O60925 122 aa12.27□□□□□ -0.45
TRAPPC3-202ENST00000373162 NXPH4O95158 308 aa12.27□□□□□ -0.45
TRAPPC3-202ENST00000373162 FLI1Q01543 452 aaPredicted RBP12.27□□□□□ -0.45
TRAPPC3-202ENST00000373162 MRPL23Q16540 153 aaKnown RBP12.27□□□□□ -0.45
TRAPPC3-202ENST00000373162 LGALSLQ3ZCW2 172 aaPredicted RBP12.27□□□□□ -0.45
TRAPPC3-202ENST00000373162 CYB561D1Q8N8Q1 229 aa12.27□□□□□ -0.45
TRAPPC3-202ENST00000373162 KCNS1Q96KK3 526 aa12.27□□□□□ -0.45
TRAPPC3-202ENST00000373162 C9orf85Q96MD7 179 aa12.27□□□□□ -0.45
TRAPPC3-202ENST00000373162 SIVA1O15304 175 aa12.26□□□□□ -0.45
TRAPPC3-202ENST00000373162 LINC00315P59091 139 aa12.26□□□□□ -0.45
TRAPPC3-202ENST00000373162 SDF2L1Q9HCN8 221 aa12.26□□□□□ -0.45
TRAPPC3-202ENST00000373162 APOBP04114 4563 aaKnown RBP12.25□□□□□ -0.45
TRAPPC3-202ENST00000373162 TRGV4A0A0C4DH28 118 aa12.25□□□□□ -0.45
TRAPPC3-202ENST00000373162 GCGP01275 180 aa12.25□□□□□ -0.45
TRAPPC3-202ENST00000373162 PFN1P07737 140 aaKnown RBP12.25□□□□□ -0.45
TRAPPC3-202ENST00000373162 DPPA3Q6W0C5 159 aa12.25□□□□□ -0.45
TRAPPC3-202ENST00000373162 NEGR1Q7Z3B1 354 aa12.25□□□□□ -0.45
TRAPPC3-202ENST00000373162 PTH2Q96A98 100 aa12.25□□□□□ -0.45
TRAPPC3-202ENST00000373162 ZNF471Q9BX82 626 aaPredicted RBP12.25□□□□□ -0.45
TRAPPC3-202ENST00000373162 FBLL1A6NHQ2 334 aaKnown RBP12.24□□□□□ -0.45
TRAPPC3-202ENST00000373162 RNASE3P12724 160 aaKnown RBP12.24□□□□□ -0.45
TRAPPC3-202ENST00000373162 GATA1P15976 413 aaPredicted RBP12.24□□□□□ -0.45
TRAPPC3-202ENST00000373162 C9orf62Q8N4C0 152 aa12.24□□□□□ -0.45
TRAPPC3-202ENST00000373162 LINC00479Q96M42 142 aa12.24□□□□□ -0.45
TRAPPC3-202ENST00000373162 NDFIP1Q9BT67 221 aa12.24□□□□□ -0.45
TRAPPC3-202ENST00000373162 FAM74A7A6NL05 159 aa12.23□□□□□ -0.45
TRAPPC3-202ENST00000373162 ORM1P02763 201 aa12.23□□□□□ -0.45
TRAPPC3-202ENST00000373162 GYPEP15421 78 aa12.23□□□□□ -0.45
TRAPPC3-202ENST00000373162 SMUG1Q53HV7 270 aa12.23□□□□□ -0.45
TRAPPC3-202ENST00000373162 COX8CQ7Z4L0 72 aa12.23□□□□□ -0.45
TRAPPC3-202ENST00000373162 KRTAP4-5Q9BYR2 181 aa12.23□□□□□ -0.45
TRAPPC3-202ENST00000373162 LOC100131303A0A0U1RQF7 123 aa12.22□□□□□ -0.45
TRAPPC3-202ENST00000373162 K7EQM0 130 aa12.22□□□□□ -0.45
TRAPPC3-202ENST00000373162 RS1O15537 224 aa12.22□□□□□ -0.45
TRAPPC3-202ENST00000373162 NKX2-5P52952 324 aaPredicted RBP12.22□□□□□ -0.45
TRAPPC3-202ENST00000373162 KRTAP10-2P60368 255 aa12.22□□□□□ -0.45
TRAPPC3-202ENST00000373162 PRNTQ86SH4 94 aa12.22□□□□□ -0.45
TRAPPC3-202ENST00000373162 OR4C5Q8NGB2 326 aa12.22□□□□□ -0.45
TRAPPC3-202ENST00000373162 TRAV34A0A0B4J273 112 aa12.21□□□□□ -0.45
TRAPPC3-202ENST00000373162 IGKV3D-20A0A0C4DH25 116 aa12.21□□□□□ -0.45
TRAPPC3-202ENST00000373162 C16orf90A8MZG2 172 aa12.21□□□□□ -0.45
TRAPPC3-202ENST00000373162 CDK2AP2O75956 126 aa12.21□□□□□ -0.45
TRAPPC3-202ENST00000373162 SRIP30626 198 aa12.21□□□□□ -0.45
TRAPPC3-202ENST00000373162 TIRAPP58753 221 aa12.21□□□□□ -0.45
TRAPPC3-202ENST00000373162 EIF5AP63241 154 aaKnown RBP12.21□□□□□ -0.45
TRAPPC3-202ENST00000373162 SAPCD1Q5SSQ6 148 aa12.21□□□□□ -0.45
TRAPPC3-202ENST00000373162 CFAP126Q5VTH2 177 aa12.21□□□□□ -0.45
TRAPPC3-202ENST00000373162 Q86TA4 180 aa12.21□□□□□ -0.45
TRAPPC3-202ENST00000373162 WFDC10BQ8IUB3 73 aa12.21□□□□□ -0.45
TRAPPC3-202ENST00000373162 ARL2-SNX15V9GYD0 113 aa12.21□□□□□ -0.45
TRAPPC3-202ENST00000373162 PGPEP1LA6NFU8 196 aa12.2□□□□□ -0.46
TRAPPC3-202ENST00000373162 PEX7O00628 323 aa12.2□□□□□ -0.46
TRAPPC3-202ENST00000373162 DNAH10OSP0CZ25 163 aa12.2□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 56.9 ms