RNA–Protein interactions for RNA: ENST00000373019.4

SF3A3-201, Transcript of splicing factor 3a subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SF3A3, Length 3,673 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A3-201ENST00000373019 PRADC1Q9BSG0 188 aa7.4□□□□□ -1.22
SF3A3-201ENST00000373019 ZNF815PA8K554 130 aa7.4□□□□□ -1.22
SF3A3-201ENST00000373019 SRRM5B3KS81 715 aa7.4□□□□□ -1.22
SF3A3-201ENST00000373019 ZNF80P51504 273 aaPredicted RBP7.4□□□□□ -1.22
SF3A3-201ENST00000373019 SUB1P53999 127 aaKnown RBP eCLIP7.4□□□□□ -1.221e-7■■■□□ 19
SF3A3-201ENST00000373019 MRGPRG-AS1Q2M3A8 158 aa7.4□□□□□ -1.22
SF3A3-201ENST00000373019 HCP5Q6MZN7 132 aa7.4□□□□□ -1.22
SF3A3-201ENST00000373019 KLHL30-AS1Q8NEE0 82 aa7.4□□□□□ -1.22
SF3A3-201ENST00000373019 CNFNQ9BYD5 112 aa7.4□□□□□ -1.22
SF3A3-201ENST00000373019 SIGLEC9Q9Y336 463 aa7.4□□□□□ -1.22
SF3A3-201ENST00000373019 HELZ2Q9BYK8 2649 aaKnown RBP7.4□□□□□ -1.23
SF3A3-201ENST00000373019 TRAV12-1A0A0B4J245 112 aa7.4□□□□□ -1.23
SF3A3-201ENST00000373019 M0R2P5 195 aa7.4□□□□□ -1.23
SF3A3-201ENST00000373019 TIMM23O14925 209 aa7.4□□□□□ -1.23
SF3A3-201ENST00000373019 EIF4EBP3O60516 100 aaPredicted RBP7.4□□□□□ -1.23
SF3A3-201ENST00000373019 ELANEP08246 267 aa7.4□□□□□ -1.23
SF3A3-201ENST00000373019 TMEM167AQ8TBQ9 72 aa7.4□□□□□ -1.23
SF3A3-201ENST00000373019 WT1P19544 449 aaPredicted RBP7.39□□□□□ -1.23
SF3A3-201ENST00000373019 RPL13AP40429 203 aaKnown RBP7.39□□□□□ -1.23
SF3A3-201ENST00000373019 LYZP61626 148 aa7.39□□□□□ -1.23
SF3A3-201ENST00000373019 LAGE3Q14657 143 aa7.39□□□□□ -1.23
SF3A3-201ENST00000373019 DTX2Q86UW9 622 aa7.39□□□□□ -1.23
SF3A3-201ENST00000373019 LINC01600Q96MT4 127 aa7.39□□□□□ -1.23
SF3A3-201ENST00000373019 MRPL20Q9BYC9 149 aaKnown RBP7.39□□□□□ -1.23
SF3A3-201ENST00000373019 C3orf36Q3SXR2 165 aa7.39□□□□□ -1.23
SF3A3-201ENST00000373019 TMEM155Q4W5P6 130 aa7.39□□□□□ -1.23
SF3A3-201ENST00000373019 SCGB1D4Q6XE38 83 aa7.39□□□□□ -1.23
SF3A3-201ENST00000373019 ATMQ13315 3056 aa7.39□□□□□ -1.23
SF3A3-201ENST00000373019 TRAV8-4A0A0B4J246 113 aa7.39□□□□□ -1.23
SF3A3-201ENST00000373019 IGHV3-30P01768 117 aa7.39□□□□□ -1.23
SF3A3-201ENST00000373019 IGHV3-30-5P0DP03 117 aa7.39□□□□□ -1.23
SF3A3-201ENST00000373019 SLC25A16P16260 332 aa7.39□□□□□ -1.23
SF3A3-201ENST00000373019 COX8CQ7Z4L0 72 aa7.39□□□□□ -1.23
SF3A3-201ENST00000373019 OR4C13Q8NGP0 309 aa7.39□□□□□ -1.23
SF3A3-201ENST00000373019 TPSG1Q9NRR2 321 aa7.39□□□□□ -1.23
SF3A3-201ENST00000373019 PKDREJQ9NTG1 2253 aa7.38□□□□□ -1.23
SF3A3-201ENST00000373019 TRAV2A0A0B4J234 112 aa7.38□□□□□ -1.23
SF3A3-201ENST00000373019 A0A0J9YY99 117 aa7.38□□□□□ -1.23
SF3A3-201ENST00000373019 K7EM74 188 aa7.38□□□□□ -1.23
SF3A3-201ENST00000373019 K7ENP7 123 aa7.38□□□□□ -1.23
SF3A3-201ENST00000373019 MRPS12O15235 138 aaKnown RBP7.38□□□□□ -1.23
SF3A3-201ENST00000373019 IGLV2-23P01705 113 aa7.38□□□□□ -1.23
SF3A3-201ENST00000373019 ZNF474Q6S9Z5 364 aaPredicted RBP7.38□□□□□ -1.23
SF3A3-201ENST00000373019 Q6ZS46 218 aa7.38□□□□□ -1.23
SF3A3-201ENST00000373019 VKORC1Q9BQB6 163 aa7.38□□□□□ -1.23
SF3A3-201ENST00000373019 MRPL23Q16540 153 aaKnown RBP7.38□□□□□ -1.23
SF3A3-201ENST00000373019 SPINK14Q6IE38 97 aa7.38□□□□□ -1.23
SF3A3-201ENST00000373019 ZNF833PQ6ZTB9 187 aa7.38□□□□□ -1.23
SF3A3-201ENST00000373019 NRACQ8N912 160 aa7.38□□□□□ -1.23
SF3A3-201ENST00000373019 NEXN-AS1Q8NBZ9 246 aa7.38□□□□□ -1.23
SF3A3-201ENST00000373019 LGALS9O00182 355 aa7.38□□□□□ -1.23
SF3A3-201ENST00000373019 NPFFO15130 113 aa7.38□□□□□ -1.23
SF3A3-201ENST00000373019 POM121L12Q8N7R1 296 aa7.38□□□□□ -1.23
SF3A3-201ENST00000373019 C1orf162Q8NEQ5 155 aaPredicted RBP7.38□□□□□ -1.23
SF3A3-201ENST00000373019 PRO1854Q9UHT4 67 aa7.38□□□□□ -1.23
SF3A3-201ENST00000373019 ZGRF1Q86YA3 2104 aa7.37□□□□□ -1.23
SF3A3-201ENST00000373019 LYPD1Q8N2G4 141 aa7.37□□□□□ -1.23
SF3A3-201ENST00000373019 TMEM101Q96IK0 257 aa7.37□□□□□ -1.23
SF3A3-201ENST00000373019 ABCA4P78363 2273 aa7.37□□□□□ -1.23
SF3A3-201ENST00000373019 TRBV7-7A0A0K0K1E9 115 aa7.37□□□□□ -1.23
SF3A3-201ENST00000373019 TIMM8AO60220 97 aaPredicted RBP7.37□□□□□ -1.23
SF3A3-201ENST00000373019 NDUFA7O95182 113 aa7.37□□□□□ -1.23
SF3A3-201ENST00000373019 APELAP0DMC3 54 aa7.37□□□□□ -1.23
SF3A3-201ENST00000373019 KLK5Q9Y337 293 aaPredicted RBP7.37□□□□□ -1.23
SF3A3-201ENST00000373019 IGSF10Q6WRI0 2623 aa7.37□□□□□ -1.23
SF3A3-201ENST00000373019 TRAV26-2A0A0B4J265 109 aa7.37□□□□□ -1.23
SF3A3-201ENST00000373019 CD40P25942 277 aa7.37□□□□□ -1.23
SF3A3-201ENST00000373019 HLA-DMBP28068 263 aa7.37□□□□□ -1.23
SF3A3-201ENST00000373019 EBI3Q14213 229 aa7.37□□□□□ -1.23
SF3A3-201ENST00000373019 ZNF672Q499Z4 452 aaPredicted RBP7.37□□□□□ -1.23
SF3A3-201ENST00000373019 FAM201AQ5SY85 155 aa7.37□□□□□ -1.23
SF3A3-201ENST00000373019 CEMP1Q6PRD7 247 aaPredicted RBP7.36□□□□□ -1.23
SF3A3-201ENST00000373019 HERVK_113P63121 156 aa7.36□□□□□ -1.23
SF3A3-201ENST00000373019 LRRC75A-AS1Q8N1F1 130 aa7.36□□□□□ -1.23
SF3A3-201ENST00000373019 LINC00574Q9H8X3 128 aa7.36□□□□□ -1.23
SF3A3-201ENST00000373019 TRGV3P03979 118 aa7.36□□□□□ -1.23
SF3A3-201ENST00000373019 SHANK2-AS3Q9BTD1 123 aa7.36□□□□□ -1.23
SF3A3-201ENST00000373019 HES7Q9BYE0 225 aa7.36□□□□□ -1.23
SF3A3-201ENST00000373019 RAI1Q7Z5J4 1906 aaPredicted RBP7.35□□□□□ -1.23
SF3A3-201ENST00000373019 IGKV2-40A0A087WW87 121 aaPredicted RBP7.35□□□□□ -1.23
SF3A3-201ENST00000373019 IGKV2D-40P01614 121 aaPredicted RBP7.35□□□□□ -1.23
SF3A3-201ENST00000373019 ZNF56Q15929 161 aa7.35□□□□□ -1.23
SF3A3-201ENST00000373019 TIMD4Q96H15 378 aa7.35□□□□□ -1.23
SF3A3-201ENST00000373019 TRGV11A0A075B6L2 103 aa7.34□□□□□ -1.23
SF3A3-201ENST00000373019 IGHV3-33P01772 117 aa7.34□□□□□ -1.23
SF3A3-201ENST00000373019 IGHG3P01860 377 aa7.34□□□□□ -1.23
SF3A3-201ENST00000373019 IGHV1-2P23083 117 aa7.34□□□□□ -1.23
SF3A3-201ENST00000373019 LINC01620Q4KN68 170 aa7.34□□□□□ -1.23
SF3A3-201ENST00000373019 Q8TAT8 98 aa7.34□□□□□ -1.23
SF3A3-201ENST00000373019 H3BRN7 92 aa7.34□□□□□ -1.23
SF3A3-201ENST00000373019 LYZL6O75951 148 aa7.34□□□□□ -1.23
SF3A3-201ENST00000373019 LHBP01229 141 aa7.34□□□□□ -1.23
SF3A3-201ENST00000373019 IGKV1-17P01599 117 aa7.34□□□□□ -1.23
SF3A3-201ENST00000373019 CECR9P0C854 216 aa7.34□□□□□ -1.23
SF3A3-201ENST00000373019 C3orf22Q8N5N4 141 aa7.34□□□□□ -1.23
SF3A3-201ENST00000373019 ICE1Q9Y2F5 2266 aa7.34□□□□□ -1.23
SF3A3-201ENST00000373019 A0A1B0GX51 115 aa7.34□□□□□ -1.23
SF3A3-201ENST00000373019 J3KT08 172 aa7.34□□□□□ -1.23
SF3A3-201ENST00000373019 P0DMU3 169 aa7.34□□□□□ -1.23
SF3A3-201ENST00000373019 FAM231AP0DMU4 169 aa7.34□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 58 ms