RNA–Protein interactions for RNA: ENST00000372577.2

NUP188-201, Transcript of nucleoporin 188, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NUP188, Length 5,689 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP188-201ENST00000372577 BUB3O43684 328 aa8.19□□□□□ -1.1
NUP188-201ENST00000372577 C11orf68Q9H3H3 251 aaKnown RBP8.19□□□□□ -1.1
NUP188-201ENST00000372577 EREGO14944 169 aa8.19□□□□□ -1.1
NUP188-201ENST00000372577 HOXD3P31249 432 aaPredicted RBP8.19□□□□□ -1.1
NUP188-201ENST00000372577 TMEM243Q9BU79 118 aa8.19□□□□□ -1.1
NUP188-201ENST00000372577 CRIP3Q6Q6R5 217 aa8.19□□□□□ -1.1
NUP188-201ENST00000372577 Q8N7P7 452 aa8.19□□□□□ -1.1
NUP188-201ENST00000372577 RITA1Q96K30 269 aa8.19□□□□□ -1.1
NUP188-201ENST00000372577 SIRPDQ9H106 197 aa8.19□□□□□ -1.1
NUP188-201ENST00000372577 JPT2Q9H910 190 aa8.19□□□□□ -1.1
NUP188-201ENST00000372577 SHANK1Q9Y566 2161 aa8.19□□□□□ -1.1
NUP188-201ENST00000372577 DOCK11Q5JSL3 2073 aa8.18□□□□□ -1.1
NUP188-201ENST00000372577 IGHV4-30-2A0A087WSY4 118 aa8.18□□□□□ -1.1
NUP188-201ENST00000372577 IGLL1P15814 213 aa8.18□□□□□ -1.1
NUP188-201ENST00000372577 TRBV20-1A0A075B6N2 111 aa8.18□□□□□ -1.1
NUP188-201ENST00000372577 A0A0U1RRA0 63 aa8.18□□□□□ -1.1
NUP188-201ENST00000372577 DEFB130BP0DP73 79 aa8.18□□□□□ -1.1
NUP188-201ENST00000372577 DEFB130AP0DP74 79 aa8.18□□□□□ -1.1
NUP188-201ENST00000372577 ZGRF1Q86YA3 2104 aa8.18□□□□□ -1.1
NUP188-201ENST00000372577 BRCA2P51587 3418 aa8.18□□□□□ -1.1
NUP188-201ENST00000372577 ALPK3Q96L96 1907 aa8.18□□□□□ -1.1
NUP188-201ENST00000372577 CFHR4Q92496 578 aa8.18□□□□□ -1.1
NUP188-201ENST00000372577 SNHG12Q9BXW3 62 aa8.18□□□□□ -1.1
NUP188-201ENST00000372577 CACNA1BQ00975 2339 aa8.18□□□□□ -1.1
NUP188-201ENST00000372577 TRAV12-2A0A075B6T6 113 aa8.18□□□□□ -1.1
NUP188-201ENST00000372577 KNCNA6PVL3 124 aa8.18□□□□□ -1.1
NUP188-201ENST00000372577 C3orf56Q8N813 242 aa8.18□□□□□ -1.1
NUP188-201ENST00000372577 ZNF747Q9BV97 191 aa8.18□□□□□ -1.1
NUP188-201ENST00000372577 LAMA2P24043 3122 aaKnown RBP8.17□□□□□ -1.1
NUP188-201ENST00000372577 GAGE12JA6NER3 117 aa8.17□□□□□ -1.1
NUP188-201ENST00000372577 DAD1P61803 113 aa8.17□□□□□ -1.1
NUP188-201ENST00000372577 GAGE1Q13065 139 aa8.17□□□□□ -1.1
NUP188-201ENST00000372577 GAGE4Q13068 117 aa8.17□□□□□ -1.1
NUP188-201ENST00000372577 GAGE5Q13069 117 aa8.17□□□□□ -1.1
NUP188-201ENST00000372577 TRAV26-2A0A0B4J265 109 aa8.17□□□□□ -1.1
NUP188-201ENST00000372577 MED14OSP0DP75 135 aa8.17□□□□□ -1.1
NUP188-201ENST00000372577 IGHV4-38-2P0DP08 117 aa8.17□□□□□ -1.1
NUP188-201ENST00000372577 C9orf118A6NHY6 69 aa8.17□□□□□ -1.1
NUP188-201ENST00000372577 HLA-DMBP28068 263 aa8.17□□□□□ -1.1
NUP188-201ENST00000372577 MRPL35Q9NZE8 188 aaKnown RBP8.17□□□□□ -1.1
NUP188-201ENST00000372577 HERVK_113P63121 156 aa8.16□□□□□ -1.1
NUP188-201ENST00000372577 C2orf82Q6UX34 121 aa8.16□□□□□ -1.1
NUP188-201ENST00000372577 C9orf47Q6ZRZ4 202 aa8.16□□□□□ -1.1
NUP188-201ENST00000372577 DNAJC30Q96LL9 226 aa8.16□□□□□ -1.1
NUP188-201ENST00000372577 ZNRF2Q8NHG8 242 aa8.16□□□□□ -1.1
NUP188-201ENST00000372577 CST9LQ9H4G1 147 aa8.16□□□□□ -1.1
NUP188-201ENST00000372577 WNK2Q9Y3S1 2297 aa8.16□□□□□ -1.1
NUP188-201ENST00000372577 MORN5Q5VZ52 161 aa8.16□□□□□ -1.1
NUP188-201ENST00000372577 IGHG2P01859 326 aa8.16□□□□□ -1.1
NUP188-201ENST00000372577 AJUBAQ96IF1 538 aa8.16□□□□□ -1.1
NUP188-201ENST00000372577 DOCK10Q96BY6 2186 aa8.16□□□□□ -1.1
NUP188-201ENST00000372577 GPHB5Q86YW7 130 aa8.15□□□□□ -1.1
NUP188-201ENST00000372577 IGKV1OR2-108A0A075B7D4 117 aa8.15□□□□□ -1.1
NUP188-201ENST00000372577 GAGE12BA1L429 117 aa8.15□□□□□ -1.1
NUP188-201ENST00000372577 EIF4EBP1Q13541 118 aaPredicted RBP8.15□□□□□ -1.1
NUP188-201ENST00000372577 TMEM95Q3KNT9 176 aa8.15□□□□□ -1.1
NUP188-201ENST00000372577 ODF3BA8MYP8 253 aa8.15□□□□□ -1.1
NUP188-201ENST00000372577 GATD1Q8NB37 220 aa8.15□□□□□ -1.1
NUP188-201ENST00000372577 KIR2DL5BA0A0G2JN68 375 aa8.15□□□□□ -1.11
NUP188-201ENST00000372577 KIR2DL5BA0A0G2JPC4 375 aa8.15□□□□□ -1.11
NUP188-201ENST00000372577 CCL24O00175 119 aa8.15□□□□□ -1.11
NUP188-201ENST00000372577 ZFP36P26651 326 aaKnown RBP8.15□□□□□ -1.11
NUP188-201ENST00000372577 UBE2DNLQ8IWF7 75 aa8.15□□□□□ -1.11
NUP188-201ENST00000372577 KIR2DL5AQ8N109 375 aa8.15□□□□□ -1.11
NUP188-201ENST00000372577 DEFB104AQ8WTQ1 72 aa8.15□□□□□ -1.11
NUP188-201ENST00000372577 CACNA1GO43497 2377 aa8.15□□□□□ -1.11
NUP188-201ENST00000372577 NAA38Q9BRA0 125 aaKnown RBP8.14□□□□□ -1.11
NUP188-201ENST00000372577 EML6Q6ZMW3 1958 aa8.14□□□□□ -1.11
NUP188-201ENST00000372577 GAGE7O76087 117 aa8.14□□□□□ -1.11
NUP188-201ENST00000372577 GAGE12FP0CL80 117 aa8.14□□□□□ -1.11
NUP188-201ENST00000372577 GAGE12GP0CL81 117 aa8.14□□□□□ -1.11
NUP188-201ENST00000372577 GAGE12IP0CL82 117 aa8.14□□□□□ -1.11
NUP188-201ENST00000372577 NPC2P61916 151 aa8.14□□□□□ -1.11
NUP188-201ENST00000372577 PCNX1Q96RV3 2341 aa8.14□□□□□ -1.11
NUP188-201ENST00000372577 CDK2AP2O75956 126 aa8.14□□□□□ -1.11
NUP188-201ENST00000372577 Q6ZPA2 131 aa8.14□□□□□ -1.11
NUP188-201ENST00000372577 NCOA6Q14686 2063 aaPredicted RBP8.14□□□□□ -1.11
NUP188-201ENST00000372577 TRAV25A0A0B4J276 109 aa8.14□□□□□ -1.11
NUP188-201ENST00000372577 RIPPLY3P57055 190 aa8.14□□□□□ -1.11
NUP188-201ENST00000372577 CITED2Q99967 270 aaPredicted RBP8.14□□□□□ -1.11
NUP188-201ENST00000372577 IGHV3-16A0A0C4DH30 117 aa8.13□□□□□ -1.11
NUP188-201ENST00000372577 CEND1Q8N111 149 aa8.13□□□□□ -1.11
NUP188-201ENST00000372577 SPANXA1Q9NS26 97 aa8.13□□□□□ -1.11
NUP188-201ENST00000372577 ABCA4P78363 2273 aa8.13□□□□□ -1.11
NUP188-201ENST00000372577 NDUFA12Q9UI09 145 aa8.13□□□□□ -1.11
NUP188-201ENST00000372577 GNRH2O43555 120 aa8.13□□□□□ -1.11
NUP188-201ENST00000372577 WISP2O76076 250 aa8.13□□□□□ -1.11
NUP188-201ENST00000372577 CTRLP40313 264 aa8.13□□□□□ -1.11
NUP188-201ENST00000372577 LINC01545Q5VT33 79 aa8.13□□□□□ -1.11
NUP188-201ENST00000372577 PRORYQ9H606 182 aa8.13□□□□□ -1.11
NUP188-201ENST00000372577 PCDH15Q96QU1 1955 aa8.13□□□□□ -1.11
NUP188-201ENST00000372577 J3QQQ9 107 aa8.13□□□□□ -1.11
NUP188-201ENST00000372577 MED13Q9UHV7 2174 aa8.13□□□□□ -1.11
NUP188-201ENST00000372577 F6UB75 175 aa8.12□□□□□ -1.11
NUP188-201ENST00000372577 BVES-AS1Q5T3Y7 98 aa8.12□□□□□ -1.11
NUP188-201ENST00000372577 F5H768 121 aa8.12□□□□□ -1.11
NUP188-201ENST00000372577 BLCAPP62952 87 aa8.12□□□□□ -1.11
NUP188-201ENST00000372577 PROP1O75360 226 aa8.12□□□□□ -1.11
NUP188-201ENST00000372577 ATRXP46100 2492 aa8.12□□□□□ -1.11
NUP188-201ENST00000372577 NBASA2RRP1 2371 aa8.12□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 52.9 ms