RNA–Protein interactions for RNA: ENST00000370966.9

DEPDC1-201, Transcript of DEP domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DEPDC1, Length 4,586 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1-201ENST00000370966 Q96MF0 132 aa9.29□□□□□ -0.92
DEPDC1-201ENST00000370966 CTSGP08311 255 aa9.29□□□□□ -0.92
DEPDC1-201ENST00000370966 MORN5Q5VZ52 161 aa9.29□□□□□ -0.92
DEPDC1-201ENST00000370966 ALPK3Q96L96 1907 aa9.29□□□□□ -0.92
DEPDC1-201ENST00000370966 HLA-DMBP28068 263 aa9.29□□□□□ -0.92
DEPDC1-201ENST00000370966 S100A7L2Q5SY68 101 aa9.29□□□□□ -0.92
DEPDC1-201ENST00000370966 ZNF493Q6ZR52 646 aa9.29□□□□□ -0.92
DEPDC1-201ENST00000370966 IGKV1OR2-108A0A075B7D4 117 aa9.29□□□□□ -0.92
DEPDC1-201ENST00000370966 TRAV26-2A0A0B4J265 109 aa9.29□□□□□ -0.92
DEPDC1-201ENST00000370966 CGB3P0DN86 165 aa9.29□□□□□ -0.92
DEPDC1-201ENST00000370966 CGB7P0DN87 165 aa9.29□□□□□ -0.92
DEPDC1-201ENST00000370966 CHD3Q12873 2000 aaKnown RBP9.29□□□□□ -0.92
DEPDC1-201ENST00000370966 KLF12Q9Y4X4 402 aa9.29□□□□□ -0.92
DEPDC1-201ENST00000370966 NCKAP5O14513 1909 aa9.28□□□□□ -0.92
DEPDC1-201ENST00000370966 KMT2EQ8IZD2 1858 aa9.28□□□□□ -0.92
DEPDC1-201ENST00000370966 SONP18583 2426 aaKnown RBP9.28□□□□□ -0.92
DEPDC1-201ENST00000370966 CRYGCP07315 174 aa9.28□□□□□ -0.92
DEPDC1-201ENST00000370966 CRIP3Q6Q6R5 217 aa9.28□□□□□ -0.92
DEPDC1-201ENST00000370966 JPT2Q9H910 190 aa9.28□□□□□ -0.92
DEPDC1-201ENST00000370966 C9orf118A6NHY6 69 aa9.28□□□□□ -0.92
DEPDC1-201ENST00000370966 SIVA1O15304 175 aa9.28□□□□□ -0.92
DEPDC1-201ENST00000370966 TAL2Q16559 108 aa9.28□□□□□ -0.92
DEPDC1-201ENST00000370966 ASPHD1Q5U4P2 390 aa9.28□□□□□ -0.92
DEPDC1-201ENST00000370966 IGF2BP2-AS1Q96M15 143 aa9.28□□□□□ -0.92
DEPDC1-201ENST00000370966 KIR2DL5BA0A0G2JN68 375 aa9.28□□□□□ -0.92
DEPDC1-201ENST00000370966 KIR2DL5BA0A0G2JPC4 375 aa9.28□□□□□ -0.92
DEPDC1-201ENST00000370966 LEPROTO15243 131 aa9.28□□□□□ -0.92
DEPDC1-201ENST00000370966 IGLV2-23P01705 113 aa9.28□□□□□ -0.92
DEPDC1-201ENST00000370966 C2orf82Q6UX34 121 aa9.28□□□□□ -0.92
DEPDC1-201ENST00000370966 KIR2DL5AQ8N109 375 aa9.28□□□□□ -0.92
DEPDC1-201ENST00000370966 OVOL2Q9BRP0 275 aa9.28□□□□□ -0.92
DEPDC1-201ENST00000370966 LINC00574Q9H8X3 128 aa9.28□□□□□ -0.92
DEPDC1-201ENST00000370966 TRBV20-1A0A075B6N2 111 aa9.27□□□□□ -0.92
DEPDC1-201ENST00000370966 RITA1Q96K30 269 aa9.27□□□□□ -0.92
DEPDC1-201ENST00000370966 VPREB3Q9UKI3 123 aa9.27□□□□□ -0.92
DEPDC1-201ENST00000370966 EP400Q96L91 3159 aa9.27□□□□□ -0.92
DEPDC1-201ENST00000370966 TRAV12-2A0A075B6T6 113 aa9.27□□□□□ -0.93
DEPDC1-201ENST00000370966 DEFB130BP0DP73 79 aa9.27□□□□□ -0.93
DEPDC1-201ENST00000370966 DEFB130AP0DP74 79 aa9.27□□□□□ -0.93
DEPDC1-201ENST00000370966 NPC2P61916 151 aa9.27□□□□□ -0.93
DEPDC1-201ENST00000370966 SS18Q15532 418 aa9.27□□□□□ -0.93
DEPDC1-201ENST00000370966 Q8N9W7 124 aa9.27□□□□□ -0.93
DEPDC1-201ENST00000370966 MYO18BQ8IUG5 2567 aa9.27□□□□□ -0.93
DEPDC1-201ENST00000370966 BUB3O43684 328 aa9.27□□□□□ -0.93
DEPDC1-201ENST00000370966 PTPN13Q12923 2485 aa9.27□□□□□ -0.93
DEPDC1-201ENST00000370966 IGHV4-61A0A0C4DH41 118 aa9.27□□□□□ -0.93
DEPDC1-201ENST00000370966 TEX22C9J3V5 150 aa9.27□□□□□ -0.93
DEPDC1-201ENST00000370966 FOXI2Q6ZQN5 318 aa9.27□□□□□ -0.93
DEPDC1-201ENST00000370966 C10orf142B7Z368 130 aa9.26□□□□□ -0.93
DEPDC1-201ENST00000370966 PROP1O75360 226 aa9.26□□□□□ -0.93
DEPDC1-201ENST00000370966 WISP2O76076 250 aa9.26□□□□□ -0.93
DEPDC1-201ENST00000370966 GAGE2BQ13066 116 aa9.26□□□□□ -0.93
DEPDC1-201ENST00000370966 GAGE2EQ4V326 116 aa9.26□□□□□ -0.93
DEPDC1-201ENST00000370966 GAGE2DQ9UEU5 116 aa9.26□□□□□ -0.93
DEPDC1-201ENST00000370966 DEFB112Q30KQ8 113 aa9.26□□□□□ -0.93
DEPDC1-201ENST00000370966 Q6ZPA2 131 aa9.26□□□□□ -0.93
DEPDC1-201ENST00000370966 PRO3102Q9H379 93 aa9.26□□□□□ -0.93
DEPDC1-201ENST00000370966 ADAMTS9Q9P2N4 1935 aa9.26□□□□□ -0.93
DEPDC1-201ENST00000370966 ADORA2A-AS1P86434 159 aa9.26□□□□□ -0.93
DEPDC1-201ENST00000370966 TRBV25-1A0A075B6N4 114 aa9.26□□□□□ -0.93
DEPDC1-201ENST00000370966 AZU1P20160 251 aa9.26□□□□□ -0.93
DEPDC1-201ENST00000370966 BVES-AS1Q5T3Y7 98 aa9.26□□□□□ -0.93
DEPDC1-201ENST00000370966 RNASE8Q8TDE3 154 aaKnown RBP9.26□□□□□ -0.93
DEPDC1-201ENST00000370966 GAGE12JA6NER3 117 aa9.25□□□□□ -0.93
DEPDC1-201ENST00000370966 GAGE4Q13068 117 aa9.25□□□□□ -0.93
DEPDC1-201ENST00000370966 GAGE5Q13069 117 aa9.25□□□□□ -0.93
DEPDC1-201ENST00000370966 FOXE3Q13461 319 aa9.25□□□□□ -0.93
DEPDC1-201ENST00000370966 DAZAP2Q15038 168 aaPredicted RBP9.25□□□□□ -0.93
DEPDC1-201ENST00000370966 CFHR4Q92496 578 aa9.25□□□□□ -0.93
DEPDC1-201ENST00000370966 WI2-2373I1.2A0A1W2PRP0 233 aa9.25□□□□□ -0.93
DEPDC1-201ENST00000370966 IGHV4-59P01825 116 aa9.25□□□□□ -0.93
DEPDC1-201ENST00000370966 LGALS1P09382 135 aaKnown RBP9.25□□□□□ -0.93
DEPDC1-201ENST00000370966 ADAMTSL5Q6ZMM2 481 aa9.25□□□□□ -0.93
DEPDC1-201ENST00000370966 GATD1Q8NB37 220 aa9.25□□□□□ -0.93
DEPDC1-201ENST00000370966 SRCAPQ6ZRS2 3230 aa9.25□□□□□ -0.93
DEPDC1-201ENST00000370966 ZNRF2Q8NHG8 242 aa9.24□□□□□ -0.93
DEPDC1-201ENST00000370966 RHOHQ15669 191 aa9.24□□□□□ -0.93
DEPDC1-201ENST00000370966 C9JAW5 83 aa9.24□□□□□ -0.93
DEPDC1-201ENST00000370966 E7EUB6 86 aa9.24□□□□□ -0.93
DEPDC1-201ENST00000370966 F6UB75 175 aa9.24□□□□□ -0.93
DEPDC1-201ENST00000370966 ZNF48Q96MX3 618 aaPredicted RBP9.24□□□□□ -0.93
DEPDC1-201ENST00000370966 DKK2Q9UBU2 259 aa9.24□□□□□ -0.93
DEPDC1-201ENST00000370966 IGHV3-16A0A0C4DH30 117 aa9.23□□□□□ -0.93
DEPDC1-201ENST00000370966 HOXD3P31249 432 aaPredicted RBP9.23□□□□□ -0.93
DEPDC1-201ENST00000370966 Q8N7P7 452 aa9.23□□□□□ -0.93
DEPDC1-201ENST00000370966 Q8NA96 180 aa9.23□□□□□ -0.93
DEPDC1-201ENST00000370966 TMEM243Q9BU79 118 aa9.23□□□□□ -0.93
DEPDC1-201ENST00000370966 MRPL36Q9P0J6 103 aaKnown RBP9.23□□□□□ -0.93
DEPDC1-201ENST00000370966 TRBV6-1A0A0K0K1D8 114 aa9.23□□□□□ -0.93
DEPDC1-201ENST00000370966 BRWD1-AS2P59051 145 aa9.23□□□□□ -0.93
DEPDC1-201ENST00000370966 C16orf54Q6UWD8 224 aa9.23□□□□□ -0.93
DEPDC1-201ENST00000370966 C10orf105Q8TEF2 133 aa9.23□□□□□ -0.93
DEPDC1-201ENST00000370966 NUPR1O60356 82 aa9.23□□□□□ -0.93
DEPDC1-201ENST00000370966 CITED1Q99966 193 aa9.23□□□□□ -0.93
DEPDC1-201ENST00000370966 NDUFA12Q9UI09 145 aa9.23□□□□□ -0.93
DEPDC1-201ENST00000370966 ARHGAP21Q5T5U3 1957 aa9.22□□□□□ -0.93
DEPDC1-201ENST00000370966 GNRH2O43555 120 aa9.22□□□□□ -0.93
DEPDC1-201ENST00000370966 ZFAND6Q6FIF0 208 aa9.22□□□□□ -0.93
DEPDC1-201ENST00000370966 BOD1L2Q8IYS8 172 aa9.22□□□□□ -0.93
DEPDC1-201ENST00000370966 C5orf56Q8N8D9 126 aa9.22□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 563.4 ms