RNA–Protein interactions for RNA: ENST00000370399.6

TGFBR3-202, Transcript of transforming growth factor beta receptor 3, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene TGFBR3, Length 4,550 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR3-202ENST00000370399 CT83Q5H943 113 aa5.49□□□□□ -1.53
TGFBR3-202ENST00000370399 FLNAP21333 2647 aaKnown RBP5.49□□□□□ -1.53
TGFBR3-202ENST00000370399 A6NDX4 124 aa5.49□□□□□ -1.53
TGFBR3-202ENST00000370399 GNRH2O43555 120 aa5.49□□□□□ -1.53
TGFBR3-202ENST00000370399 CIDEAO60543 219 aa5.49□□□□□ -1.53
TGFBR3-202ENST00000370399 DUSP14O95147 198 aaKnown RBP5.49□□□□□ -1.53
TGFBR3-202ENST00000370399 FAM104BQ5XKR9 115 aa5.49□□□□□ -1.53
TGFBR3-202ENST00000370399 IFI27L1Q96BM0 104 aa5.49□□□□□ -1.53
TGFBR3-202ENST00000370399 GFRA4Q9GZZ7 299 aa5.49□□□□□ -1.53
TGFBR3-202ENST00000370399 ITPR3Q14573 2671 aa5.49□□□□□ -1.53
TGFBR3-202ENST00000370399 GATA1P15976 413 aaPredicted RBP5.49□□□□□ -1.53
TGFBR3-202ENST00000370399 SRSF9Q13242 221 aaKnown RBP eCLIP5.49□□□□□ -1.53
TGFBR3-202ENST00000370399 RAB37Q96AX2 223 aa5.49□□□□□ -1.53
TGFBR3-202ENST00000370399 PPBPP02775 128 aa5.48□□□□□ -1.53
TGFBR3-202ENST00000370399 MRPL51Q4U2R6 128 aaKnown RBP5.48□□□□□ -1.53
TGFBR3-202ENST00000370399 COL5A1-AS1Q5SY13 56 aa5.48□□□□□ -1.53
TGFBR3-202ENST00000370399 TMEM190Q8WZ59 177 aa5.48□□□□□ -1.53
TGFBR3-202ENST00000370399 KLF12Q9Y4X4 402 aa5.48□□□□□ -1.53
TGFBR3-202ENST00000370399 FAM231BA6NCW3 169 aa5.48□□□□□ -1.53
TGFBR3-202ENST00000370399 CHCHD1Q96BP2 118 aaKnown RBP5.48□□□□□ -1.53
TGFBR3-202ENST00000370399 NDUFAF3Q9BU61 184 aa5.48□□□□□ -1.53
TGFBR3-202ENST00000370399 IGHV4OR15-8A0A075B7B6 117 aa5.48□□□□□ -1.53
TGFBR3-202ENST00000370399 A0A087WW49 117 aa5.48□□□□□ -1.53
TGFBR3-202ENST00000370399 IGHV3-53P01767 116 aa5.48□□□□□ -1.53
TGFBR3-202ENST00000370399 ELANEP08246 267 aa5.48□□□□□ -1.53
TGFBR3-202ENST00000370399 GCSHP23434 173 aa5.48□□□□□ -1.53
TGFBR3-202ENST00000370399 ZNF876PQ49A33 203 aa5.48□□□□□ -1.53
TGFBR3-202ENST00000370399 TMEM170BQ5T4T1 132 aa5.48□□□□□ -1.53
TGFBR3-202ENST00000370399 Q8N6K4 173 aa5.48□□□□□ -1.53
TGFBR3-202ENST00000370399 MEGF9Q9H1U4 602 aa5.48□□□□□ -1.53
TGFBR3-202ENST00000370399 ZFHX4Q86UP3 3567 aa5.48□□□□□ -1.53
TGFBR3-202ENST00000370399 LINC01619G3V211 115 aa5.48□□□□□ -1.53
TGFBR3-202ENST00000370399 TNFRSF6BO95407 300 aa5.48□□□□□ -1.53
TGFBR3-202ENST00000370399 NPYP01303 97 aa5.48□□□□□ -1.53
TGFBR3-202ENST00000370399 SAMD13Q5VXD3 122 aa5.48□□□□□ -1.53
TGFBR3-202ENST00000370399 NEGR1Q7Z3B1 354 aa5.48□□□□□ -1.53
TGFBR3-202ENST00000370399 NXT2Q9NPJ8 142 aaKnown RBP5.48□□□□□ -1.53
TGFBR3-202ENST00000370399 POLR3KQ9Y2Y1 108 aaPredicted RBP5.48□□□□□ -1.53
TGFBR3-202ENST00000370399 TNFRSF18Q9Y5U5 241 aa5.48□□□□□ -1.53
TGFBR3-202ENST00000370399 TRGV2A0A075B6R0 118 aa5.47□□□□□ -1.53
TGFBR3-202ENST00000370399 TRAV9-2A0A087WT02 112 aa5.47□□□□□ -1.53
TGFBR3-202ENST00000370399 ZNF80P51504 273 aaPredicted RBP5.47□□□□□ -1.53
TGFBR3-202ENST00000370399 LYRM7Q5U5X0 104 aa5.47□□□□□ -1.53
TGFBR3-202ENST00000370399 TMEM158Q8WZ71 300 aa5.47□□□□□ -1.53
TGFBR3-202ENST00000370399 MS4A6AQ9H2W1 248 aa5.47□□□□□ -1.53
TGFBR3-202ENST00000370399 A6NDN8 102 aa5.47□□□□□ -1.53
TGFBR3-202ENST00000370399 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP5.47□□□□□ -1.53
TGFBR3-202ENST00000370399 SYS1-DBNDD2H3BUS1 97 aa5.47□□□□□ -1.53
TGFBR3-202ENST00000370399 TDRG1Q3Y452 100 aa5.47□□□□□ -1.53
TGFBR3-202ENST00000370399 MIEN1Q9BRT3 115 aa5.47□□□□□ -1.53
TGFBR3-202ENST00000370399 ST20Q9HBF5 79 aa5.47□□□□□ -1.53
TGFBR3-202ENST00000370399 CHD6Q8TD26 2715 aa5.47□□□□□ -1.53
TGFBR3-202ENST00000370399 IGHV4-31P0DP07 118 aa5.47□□□□□ -1.53
TGFBR3-202ENST00000370399 MRGPRG-AS1Q2M3A8 158 aa5.47□□□□□ -1.53
TGFBR3-202ENST00000370399 C16orf54Q6UWD8 224 aa5.47□□□□□ -1.53
TGFBR3-202ENST00000370399 PET117Q6UWS5 81 aa5.47□□□□□ -1.53
TGFBR3-202ENST00000370399 PSMB2P49721 201 aa5.47□□□□□ -1.53
TGFBR3-202ENST00000370399 SRSF1Q07955 248 aaKnown RBP eCLIP5.47□□□□□ -1.53
TGFBR3-202ENST00000370399 APRG1Q8IVJ8 170 aa5.47□□□□□ -1.53
TGFBR3-202ENST00000370399 JMJD8Q96S16 334 aa5.47□□□□□ -1.53
TGFBR3-202ENST00000370399 F8P00451 2351 aa5.46□□□□□ -1.54
TGFBR3-202ENST00000370399 K7ERU9 68 aa5.46□□□□□ -1.54
TGFBR3-202ENST00000370399 IGF1P05019 195 aa5.46□□□□□ -1.54
TGFBR3-202ENST00000370399 MAJINQ3KP22 176 aa5.46□□□□□ -1.54
TGFBR3-202ENST00000370399 OR2K2Q8NGT1 345 aa5.46□□□□□ -1.54
TGFBR3-202ENST00000370399 DPH3P1Q9H4G8 78 aa5.46□□□□□ -1.54
TGFBR3-202ENST00000370399 IGHV1-24A0A0C4DH33 117 aa5.46□□□□□ -1.54
TGFBR3-202ENST00000370399 OR11H12B2RN74 326 aa5.46□□□□□ -1.54
TGFBR3-202ENST00000370399 NPIPB6E9PJ23 425 aa5.46□□□□□ -1.54
TGFBR3-202ENST00000370399 ATP5LO75964 103 aa5.46□□□□□ -1.54
TGFBR3-202ENST00000370399 LGALS1P09382 135 aaKnown RBP5.46□□□□□ -1.54
TGFBR3-202ENST00000370399 LOXL1Q08397 574 aaPredicted RBP5.46□□□□□ -1.54
TGFBR3-202ENST00000370399 LINC00173Q6ZV60 143 aa5.46□□□□□ -1.54
TGFBR3-202ENST00000370399 STPG4Q8N801 248 aa5.46□□□□□ -1.54
TGFBR3-202ENST00000370399 YPEL4Q96NS1 127 aa5.46□□□□□ -1.54
TGFBR3-202ENST00000370399 SIGLEC8Q9NYZ4 499 aa5.46□□□□□ -1.54
TGFBR3-202ENST00000370399 H3BUA1 57 aa5.46□□□□□ -1.54
TGFBR3-202ENST00000370399 NDUFS6O75380 124 aaKnown RBP5.46□□□□□ -1.54
TGFBR3-202ENST00000370399 SRSF2Q01130 221 aaKnown RBP5.46□□□□□ -1.54
TGFBR3-202ENST00000370399 GDF5OSQ5U4N7 250 aa5.46□□□□□ -1.54
TGFBR3-202ENST00000370399 MLST8Q9BVC4 326 aa5.46□□□□□ -1.54
TGFBR3-202ENST00000370399 CSTL1Q9H114 145 aa5.46□□□□□ -1.54
TGFBR3-202ENST00000370399 COL27A1Q8IZC6 1860 aaPredicted RBP5.45□□□□□ -1.54
TGFBR3-202ENST00000370399 IGKV3D-20A0A0C4DH25 116 aa5.45□□□□□ -1.54
TGFBR3-202ENST00000370399 IGHV3-16A0A0C4DH30 117 aa5.45□□□□□ -1.54
TGFBR3-202ENST00000370399 CDKN1BP46527 198 aa5.45□□□□□ -1.54
TGFBR3-202ENST00000370399 HERVK_113P61574 105 aa5.45□□□□□ -1.54
TGFBR3-202ENST00000370399 COA6Q5JTJ3 125 aaKnown RBP5.45□□□□□ -1.54
TGFBR3-202ENST00000370399 LAMTOR2Q9Y2Q5 125 aa5.45□□□□□ -1.54
TGFBR3-202ENST00000370399 SMAD5-AS1Q9Y6J3 95 aa5.45□□□□□ -1.54
TGFBR3-202ENST00000370399 TRGV1A0A0A0MS02 117 aa5.45□□□□□ -1.54
TGFBR3-202ENST00000370399 C19orf71A6NCJ1 209 aa5.45□□□□□ -1.54
TGFBR3-202ENST00000370399 SNCGO76070 127 aa5.45□□□□□ -1.54
TGFBR3-202ENST00000370399 PRSS2P07478 247 aa5.45□□□□□ -1.54
TGFBR3-202ENST00000370399 HTN3P15516 51 aa5.45□□□□□ -1.54
TGFBR3-202ENST00000370399 KIR3DS1Q14943 382 aa5.45□□□□□ -1.54
TGFBR3-202ENST00000370399 AMMECR1LQ6DCA0 310 aa5.45□□□□□ -1.54
TGFBR3-202ENST00000370399 ZFAND3Q9H8U3 227 aa5.45□□□□□ -1.54
TGFBR3-202ENST00000370399 LAGE3Q14657 143 aa5.45□□□□□ -1.54
TGFBR3-202ENST00000370399 OR11H2Q8NH07 326 aa5.45□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 221.4 ms