RNA–Protein interactions for RNA: ENST00000369603.9

SMNDC1-202, Transcript of survival motor neuron domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMNDC1, Length 4,341 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMNDC1-202ENST00000369603 TRGV2A0A075B6R0 118 aa4.12□□□□□ -1.75
SMNDC1-202ENST00000369603 SNCGO76070 127 aa4.12□□□□□ -1.75
SMNDC1-202ENST00000369603 IGKCP01834 107 aa4.12□□□□□ -1.75
SMNDC1-202ENST00000369603 MRPL51Q4U2R6 128 aaKnown RBP4.12□□□□□ -1.75
SMNDC1-202ENST00000369603 TMEM170BQ5T4T1 132 aa4.12□□□□□ -1.75
SMNDC1-202ENST00000369603 COPS9Q8WXC6 57 aa4.12□□□□□ -1.75
SMNDC1-202ENST00000369603 AJUBAQ96IF1 538 aa4.12□□□□□ -1.75
SMNDC1-202ENST00000369603 SIGMAR1Q99720 223 aa4.12□□□□□ -1.75
SMNDC1-202ENST00000369603 NAV2Q8IVL1 2488 aa4.12□□□□□ -1.75
SMNDC1-202ENST00000369603 EGR2P11161 476 aaPredicted RBP4.12□□□□□ -1.75
SMNDC1-202ENST00000369603 HLA-DMBP28068 263 aa4.12□□□□□ -1.75
SMNDC1-202ENST00000369603 HOXD3P31249 432 aaPredicted RBP4.12□□□□□ -1.75
SMNDC1-202ENST00000369603 PSMB2P49721 201 aa4.12□□□□□ -1.75
SMNDC1-202ENST00000369603 SRSF2Q01130 221 aaKnown RBP4.12□□□□□ -1.75
SMNDC1-202ENST00000369603 PRSS57Q6UWY2 283 aa4.12□□□□□ -1.75
SMNDC1-202ENST00000369603 TMEM86BQ8N661 226 aa4.12□□□□□ -1.75
SMNDC1-202ENST00000369603 GTSF1LQ9H1H1 148 aa4.12□□□□□ -1.75
SMNDC1-202ENST00000369603 VCX2Q9H322 139 aa4.12□□□□□ -1.75
SMNDC1-202ENST00000369603 IGHV1OR15-1A0A075B7D0 117 aa4.11□□□□□ -1.75
SMNDC1-202ENST00000369603 FOXI2Q6ZQN5 318 aa4.11□□□□□ -1.75
SMNDC1-202ENST00000369603 Q8N8P6 123 aa4.11□□□□□ -1.75
SMNDC1-202ENST00000369603 TMEM101Q96IK0 257 aa4.11□□□□□ -1.75
SMNDC1-202ENST00000369603 MKI67P46013 3256 aaKnown RBP4.11□□□□□ -1.75
SMNDC1-202ENST00000369603 NAV3Q8IVL0 2385 aa4.11□□□□□ -1.75
SMNDC1-202ENST00000369603 RHODO00212 210 aa4.11□□□□□ -1.75
SMNDC1-202ENST00000369603 PLNP26678 52 aa4.11□□□□□ -1.75
SMNDC1-202ENST00000369603 CIRBPQ14011 172 aaKnown RBP4.11□□□□□ -1.75
SMNDC1-202ENST00000369603 ANXA2RQ3ZCQ2 193 aa4.11□□□□□ -1.75
SMNDC1-202ENST00000369603 C9orf47Q6ZRZ4 202 aa4.11□□□□□ -1.75
SMNDC1-202ENST00000369603 BCL6BQ8N143 479 aaPredicted RBP4.11□□□□□ -1.75
SMNDC1-202ENST00000369603 ZNF843Q8N446 348 aa4.11□□□□□ -1.75
SMNDC1-202ENST00000369603 TP53TG3Q9ULZ0 132 aa4.11□□□□□ -1.75
SMNDC1-202ENST00000369603 TANC2Q9HCD6 1990 aa4.11□□□□□ -1.75
SMNDC1-202ENST00000369603 DOPEY2Q9Y3R5 2298 aa4.11□□□□□ -1.75
SMNDC1-202ENST00000369603 C19orf71A6NCJ1 209 aa4.11□□□□□ -1.75
SMNDC1-202ENST00000369603 SMKR1H3BMG3 65 aa4.11□□□□□ -1.75
SMNDC1-202ENST00000369603 H3BRM9 83 aa4.11□□□□□ -1.75
SMNDC1-202ENST00000369603 DEFB125Q8N687 156 aa4.11□□□□□ -1.75
SMNDC1-202ENST00000369603 TMEM158Q8WZ71 300 aa4.11□□□□□ -1.75
SMNDC1-202ENST00000369603 CHTOPQ9Y3Y2 248 aaKnown RBP4.11□□□□□ -1.75
SMNDC1-202ENST00000369603 K7EP13 123 aa4.1□□□□□ -1.75
SMNDC1-202ENST00000369603 SUMO2P61956 95 aaKnown RBP4.1□□□□□ -1.75
SMNDC1-202ENST00000369603 SPINK13Q1W4C9 94 aa4.1□□□□□ -1.75
SMNDC1-202ENST00000369603 TMEM95Q3KNT9 176 aa4.1□□□□□ -1.75
SMNDC1-202ENST00000369603 ZNF876PQ49A33 203 aa4.1□□□□□ -1.75
SMNDC1-202ENST00000369603 CCDC140Q96MF4 163 aa4.1□□□□□ -1.75
SMNDC1-202ENST00000369603 CSTL1Q9H114 145 aa4.1□□□□□ -1.75
SMNDC1-202ENST00000369603 IGLV2-8P01709 118 aa4.1□□□□□ -1.75
SMNDC1-202ENST00000369603 IGHG4P01861 327 aa4.1□□□□□ -1.75
SMNDC1-202ENST00000369603 COX8AP10176 69 aa4.1□□□□□ -1.75
SMNDC1-202ENST00000369603 LINC00173Q6ZV60 143 aa4.1□□□□□ -1.75
SMNDC1-202ENST00000369603 TRPT1Q86TN4 253 aaKnown RBP4.1□□□□□ -1.75
SMNDC1-202ENST00000369603 ZNF479Q96JC4 524 aa4.1□□□□□ -1.75
SMNDC1-202ENST00000369603 A0A0C4DFX4 3053 aa4.1□□□□□ -1.75
SMNDC1-202ENST00000369603 TRBV7-9A0A0J9YWB2 115 aa4.1□□□□□ -1.75
SMNDC1-202ENST00000369603 C9orf118A6NHY6 69 aa4.1□□□□□ -1.75
SMNDC1-202ENST00000369603 K7EMI3 77 aa4.1□□□□□ -1.75
SMNDC1-202ENST00000369603 C20orf78Q9BR46 151 aa4.1□□□□□ -1.75
SMNDC1-202ENST00000369603 MLST8Q9BVC4 326 aa4.1□□□□□ -1.75
SMNDC1-202ENST00000369603 MRPL16Q9NX20 251 aaKnown RBP4.1□□□□□ -1.75
SMNDC1-202ENST00000369603 SIGLEC8Q9NYZ4 499 aa4.1□□□□□ -1.75
SMNDC1-202ENST00000369603 TSSC4Q9Y5U2 329 aaPredicted RBP4.1□□□□□ -1.75
SMNDC1-202ENST00000369603 NOTCH2Q04721 2471 aa4.1□□□□□ -1.75
SMNDC1-202ENST00000369603 A8MWV9 139 aa4.09□□□□□ -1.75
SMNDC1-202ENST00000369603 MYCNOSP40205 109 aa4.09□□□□□ -1.75
SMNDC1-202ENST00000369603 SFTA2Q6UW10 78 aa4.09□□□□□ -1.75
SMNDC1-202ENST00000369603 C1orf159Q96HA4 380 aa4.09□□□□□ -1.75
SMNDC1-202ENST00000369603 BRCA2P51587 3418 aa4.09□□□□□ -1.75
SMNDC1-202ENST00000369603 PRSS47A8MTI9 375 aa4.09□□□□□ -1.75
SMNDC1-202ENST00000369603 RPL36AP83881 106 aaKnown RBP4.09□□□□□ -1.75
SMNDC1-202ENST00000369603 GTSF1Q8WW33 167 aa4.09□□□□□ -1.75
SMNDC1-202ENST00000369603 RPL36ALQ969Q0 106 aaKnown RBP4.09□□□□□ -1.75
SMNDC1-202ENST00000369603 ARHGAP32A7KAX9 2087 aa4.09□□□□□ -1.75
SMNDC1-202ENST00000369603 PTPN13Q12923 2485 aa4.09□□□□□ -1.75
SMNDC1-202ENST00000369603 TRGV4A0A0C4DH28 118 aa4.09□□□□□ -1.75
SMNDC1-202ENST00000369603 H7C2G1 150 aa4.09□□□□□ -1.75
SMNDC1-202ENST00000369603 TAX1BP3O14907 124 aa4.09□□□□□ -1.75
SMNDC1-202ENST00000369603 NPYP01303 97 aa4.09□□□□□ -1.75
SMNDC1-202ENST00000369603 CTRLP40313 264 aa4.09□□□□□ -1.75
SMNDC1-202ENST00000369603 RBX1P62877 108 aa4.09□□□□□ -1.75
SMNDC1-202ENST00000369603 SPAG8Q99932 426 aaPredicted RBP4.09□□□□□ -1.75
SMNDC1-202ENST00000369603 CHD8Q9HCK8 2581 aa4.09□□□□□ -1.75
SMNDC1-202ENST00000369603 A0A087WWL8 130 aa4.09□□□□□ -1.76
SMNDC1-202ENST00000369603 LINC01548A6NM66 108 aa4.09□□□□□ -1.76
SMNDC1-202ENST00000369603 K7EP34 96 aa4.09□□□□□ -1.76
SMNDC1-202ENST00000369603 COX6CP09669 75 aa4.09□□□□□ -1.76
SMNDC1-202ENST00000369603 IGHV4-31P0DP07 118 aa4.09□□□□□ -1.76
SMNDC1-202ENST00000369603 MED14OSP0DP75 135 aa4.09□□□□□ -1.76
SMNDC1-202ENST00000369603 CD28P10747 220 aa4.09□□□□□ -1.76
SMNDC1-202ENST00000369603 RNF152Q8N8N0 203 aa4.09□□□□□ -1.76
SMNDC1-202ENST00000369603 SPXQ9BT56 116 aa4.09□□□□□ -1.76
SMNDC1-202ENST00000369603 SMIM2Q9BVW6 85 aa4.09□□□□□ -1.76
SMNDC1-202ENST00000369603 TRGV1A0A0A0MS02 117 aa4.08□□□□□ -1.76
SMNDC1-202ENST00000369603 TMEM238C9JI98 176 aa4.08□□□□□ -1.76
SMNDC1-202ENST00000369603 PRSS2P07478 247 aa4.08□□□□□ -1.76
SMNDC1-202ENST00000369603 LGALS9BQ3B8N2 356 aa4.08□□□□□ -1.76
SMNDC1-202ENST00000369603 LGALS9CQ6DKI2 356 aa4.08□□□□□ -1.76
SMNDC1-202ENST00000369603 Q6YL49 198 aa4.08□□□□□ -1.76
SMNDC1-202ENST00000369603 ADAMTSL5Q6ZMM2 481 aa4.08□□□□□ -1.76
SMNDC1-202ENST00000369603 MTURNQ8N3F0 131 aa4.08□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 58.4 ms