RNA–Protein interactions for RNA: ENST00000362011.6

SHISA4-201, Transcript of shisa family member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHISA4, Length 1,341 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHISA4-201ENST00000362011 KIR2DL5AQ8N109 375 aa15.07■□□□□ 0
SHISA4-201ENST00000362011 KIR2DL5BQ8NHK3 375 aa15.07■□□□□ 0
SHISA4-201ENST00000362011 NAGKQ9UJ70 344 aa15.07■□□□□ 0
SHISA4-201ENST00000362011 GIG44P09565 113 aaPredicted RBP15.06■□□□□ 0
SHISA4-201ENST00000362011 RBMY1A1P0DJD3 496 aaKnown RBP15.06■□□□□ 0
SHISA4-201ENST00000362011 RBMY1CP0DJD4 496 aa15.06■□□□□ 0
SHISA4-201ENST00000362011 RPL19P84098 196 aaKnown RBP15.06■□□□□ 0
SHISA4-201ENST00000362011 RBMY1FQ15415 496 aaKnown RBP15.06■□□□□ 0
SHISA4-201ENST00000362011 C11orf21Q9P2W6 132 aa15.06■□□□□ 0
SHISA4-201ENST00000362011 TENM3Q9P273 2699 aa15.05■□□□□ 0
SHISA4-201ENST00000362011 RPS20P60866 119 aaKnown RBP15.05■□□□□ -0
SHISA4-201ENST00000362011 CT83Q5H943 113 aa15.05■□□□□ -0
SHISA4-201ENST00000362011 MUC21Q5SSG8 566 aa15.05■□□□□ -0
SHISA4-201ENST00000362011 IGKV3D-20A0A0C4DH25 116 aa15.04■□□□□ -0
SHISA4-201ENST00000362011 XKRY2A2RUG3 117 aa15.04■□□□□ -0
SHISA4-201ENST00000362011 A8MWL6 223 aa15.04■□□□□ -0
SHISA4-201ENST00000362011 ANXA2RQ3ZCQ2 193 aa15.04■□□□□ -0
SHISA4-201ENST00000362011 FAM159AQ6UWV7 190 aa15.04■□□□□ -0
SHISA4-201ENST00000362011 TMEM256Q8N2U0 113 aa15.04■□□□□ -0
SHISA4-201ENST00000362011 KCNS1Q96KK3 526 aa15.04■□□□□ -0
SHISA4-201ENST00000362011 TMEM242Q9NWH2 141 aa15.04■□□□□ -0
SHISA4-201ENST00000362011 GOLT1BQ9Y3E0 138 aa15.04■□□□□ -0
SHISA4-201ENST00000362011 IGHV1OR15-1A0A075B7D0 117 aa15.03■□□□□ -0
SHISA4-201ENST00000362011 TMSB15BA0A087X1C1 80 aa15.03■□□□□ -0
SHISA4-201ENST00000362011 CXCL1P09341 107 aa15.02■□□□□ -0
SHISA4-201ENST00000362011 C1orf158Q8N1D5 194 aa15.02■□□□□ -0
SHISA4-201ENST00000362011 LINC01587Q99440 93 aa15.02■□□□□ -0
SHISA4-201ENST00000362011 PYGO2Q9BRQ0 406 aa15.02■□□□□ -0
SHISA4-201ENST00000362011 TMEM208Q9BTX3 173 aa15.02■□□□□ -0
SHISA4-201ENST00000362011 IL36BQ9NZH7 164 aa15.02■□□□□ -0
SHISA4-201ENST00000362011 UBE2CO00762 179 aa15.01□□□□□ -0.01
SHISA4-201ENST00000362011 CSNK1G2-AS1Q8NCQ2 148 aa15.01□□□□□ -0.01
SHISA4-201ENST00000362011 TSKUQ8WUA8 353 aa15.01□□□□□ -0.01
SHISA4-201ENST00000362011 GZMBP10144 247 aa15□□□□□ -0.01
SHISA4-201ENST00000362011 TDRG1Q3Y452 100 aa15□□□□□ -0.01
SHISA4-201ENST00000362011 LINC00467Q9BRT7 94 aa15□□□□□ -0.01
SHISA4-201ENST00000362011 IGHV3OR16-12A0A075B7B8 117 aa14.99□□□□□ -0.01
SHISA4-201ENST00000362011 SMIM27A0A1W2PRY6 76 aa14.99□□□□□ -0.01
SHISA4-201ENST00000362011 GRIFINA4D1Z8 144 aa14.99□□□□□ -0.01
SHISA4-201ENST00000362011 TYMSP04818 313 aa14.99□□□□□ -0.01
SHISA4-201ENST00000362011 FRMD6-AS1P0C7T7 363 aa14.99□□□□□ -0.01
SHISA4-201ENST00000362011 WWC2-AS2Q96NR7 200 aa14.99□□□□□ -0.01
SHISA4-201ENST00000362011 IMMP2LQ96T52 175 aa14.99□□□□□ -0.01
SHISA4-201ENST00000362011 GFRA4Q9GZZ7 299 aa14.99□□□□□ -0.01
SHISA4-201ENST00000362011 TRGV11A0A075B6L2 103 aa14.98□□□□□ -0.01
SHISA4-201ENST00000362011 FAM231BA6NCW3 169 aa14.98□□□□□ -0.01
SHISA4-201ENST00000362011 CXorf65A6NEN9 183 aa14.98□□□□□ -0.01
SHISA4-201ENST00000362011 CBY3A6NI87 242 aa14.98□□□□□ -0.01
SHISA4-201ENST00000362011 SCO1O75880 301 aa14.98□□□□□ -0.01
SHISA4-201ENST00000362011 S100PP25815 95 aa14.98□□□□□ -0.01
SHISA4-201ENST00000362011 KCNIP4Q6PIL6 250 aa14.98□□□□□ -0.01
SHISA4-201ENST00000362011 B9D2Q9BPU9 175 aa14.98□□□□□ -0.01
SHISA4-201ENST00000362011 SMCO4Q9NRQ5 59 aa14.98□□□□□ -0.01
SHISA4-201ENST00000362011 GNRH2O43555 120 aa14.97□□□□□ -0.01
SHISA4-201ENST00000362011 ASIPP42127 132 aa14.97□□□□□ -0.01
SHISA4-201ENST00000362011 TCL1AP56279 114 aa14.97□□□□□ -0.01
SHISA4-201ENST00000362011 DNLZQ5SXM8 178 aa14.97□□□□□ -0.01
SHISA4-201ENST00000362011 NEU1Q99519 415 aa14.97□□□□□ -0.01
SHISA4-201ENST00000362011 HTN1P15515 57 aa14.96□□□□□ -0.01
SHISA4-201ENST00000362011 S100A4P26447 101 aaKnown RBP14.96□□□□□ -0.01
SHISA4-201ENST00000362011 DEFB121Q5J5C9 76 aa14.96□□□□□ -0.01
SHISA4-201ENST00000362011 TMEM88Q6PEY1 159 aa14.96□□□□□ -0.01
SHISA4-201ENST00000362011 ZNF705AQ6ZN79 300 aaPredicted RBP14.96□□□□□ -0.01
SHISA4-201ENST00000362011 ZNF575Q86XF7 245 aa14.96□□□□□ -0.01
SHISA4-201ENST00000362011 CBLN2Q8IUK8 224 aa14.96□□□□□ -0.01
SHISA4-201ENST00000362011 GTSF1Q8WW33 167 aa14.96□□□□□ -0.01
SHISA4-201ENST00000362011 NAT8BQ9UHF3 227 aa14.96□□□□□ -0.01
SHISA4-201ENST00000362011 TP53TG3Q9ULZ0 132 aa14.96□□□□□ -0.01
SHISA4-201ENST00000362011 MUC4Q99102 2169 aa14.95□□□□□ -0.02
SHISA4-201ENST00000362011 A0A1W2PPQ1 181 aa14.95□□□□□ -0.02
SHISA4-201ENST00000362011 HIGD1CA8MV81 97 aa14.95□□□□□ -0.02
SHISA4-201ENST00000362011 IGLC6P0CF74 106 aa14.95□□□□□ -0.02
SHISA4-201ENST00000362011 DEFB135Q30KP9 77 aa14.95□□□□□ -0.02
SHISA4-201ENST00000362011 FER1L6-AS1Q8NA97 138 aa14.95□□□□□ -0.02
SHISA4-201ENST00000362011 MED14OSP0DP75 135 aa14.94□□□□□ -0.02
SHISA4-201ENST00000362011 FAM3BP58499 235 aaPredicted RBP14.94□□□□□ -0.02
SHISA4-201ENST00000362011 Q6ZWC4 215 aa14.94□□□□□ -0.02
SHISA4-201ENST00000362011 RCHY1Q96PM5 261 aa14.94□□□□□ -0.02
SHISA4-201ENST00000362011 URGCP-MRPS24S4R325 110 aa14.94□□□□□ -0.02
SHISA4-201ENST00000362011 IGHV3-16A0A0C4DH30 117 aa14.93□□□□□ -0.02
SHISA4-201ENST00000362011 H3BVH4 76 aa14.93□□□□□ -0.02
SHISA4-201ENST00000362011 FOXA3P55318 350 aaPredicted RBP14.93□□□□□ -0.02
SHISA4-201ENST00000362011 ZNF415Q09FC8 603 aa14.93□□□□□ -0.02
SHISA4-201ENST00000362011 NUP35Q8NFH5 326 aa14.93□□□□□ -0.02
SHISA4-201ENST00000362011 PGLYRP4Q96LB8 373 aa14.93□□□□□ -0.02
SHISA4-201ENST00000362011 TPPP3Q9BW30 176 aa14.93□□□□□ -0.02
SHISA4-201ENST00000362011 TRAV9-1A0A075B6T8 112 aa14.92□□□□□ -0.02
SHISA4-201ENST00000362011 RNASE3P12724 160 aaKnown RBP14.92□□□□□ -0.02
SHISA4-201ENST00000362011 SNAI2O43623 268 aa14.92□□□□□ -0.02
SHISA4-201ENST00000362011 PRM2P04554 102 aa14.92□□□□□ -0.02
SHISA4-201ENST00000362011 OR5AL1P0C617 328 aa14.92□□□□□ -0.02
SHISA4-201ENST00000362011 ARMS2P0C7Q2 107 aa14.92□□□□□ -0.02
SHISA4-201ENST00000362011 CTRLP40313 264 aa14.92□□□□□ -0.02
SHISA4-201ENST00000362011 RRN3P1Q2M238 152 aa14.92□□□□□ -0.02
SHISA4-201ENST00000362011 LYZL1Q6UWQ5 148 aa14.92□□□□□ -0.02
SHISA4-201ENST00000362011 BORCS7Q96B45 105 aa14.92□□□□□ -0.02
SHISA4-201ENST00000362011 RNF183Q96D59 192 aa14.92□□□□□ -0.02
SHISA4-201ENST00000362011 TIMM8BQ9Y5J9 83 aaPredicted RBP14.92□□□□□ -0.02
SHISA4-201ENST00000362011 SMIM9A6NGZ8 99 aa14.91□□□□□ -0.02
SHISA4-201ENST00000362011 F2Z2F3 143 aa14.91□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms