RNA–Protein interactions for RNA: ENST00000359276.8

CTPS2-201, Transcript of CTP synthase 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTPS2, Length 3,629 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTPS2-201ENST00000359276 ZMAT4Q9H898 229 aa12.76□□□□□ -0.37
CTPS2-201ENST00000359276 PHLDA3Q9Y5J5 127 aa12.76□□□□□ -0.37
CTPS2-201ENST00000359276 MORN3Q6PF18 240 aaPredicted RBP12.76□□□□□ -0.37
CTPS2-201ENST00000359276 RNASE6Q93091 150 aaKnown RBP12.76□□□□□ -0.37
CTPS2-201ENST00000359276 MBD3L4A6NDZ8 208 aaPredicted RBP12.76□□□□□ -0.37
CTPS2-201ENST00000359276 MBD3L3A6NE82 208 aaPredicted RBP12.76□□□□□ -0.37
CTPS2-201ENST00000359276 MBD3L5A6NJ08 208 aaPredicted RBP12.76□□□□□ -0.37
CTPS2-201ENST00000359276 HERVK_113P61574 105 aa12.76□□□□□ -0.37
CTPS2-201ENST00000359276 MBD3L2Q8NHZ7 208 aaPredicted RBP12.76□□□□□ -0.37
CTPS2-201ENST00000359276 TLN1Q9Y490 2541 aaKnown RBP12.75□□□□□ -0.37
CTPS2-201ENST00000359276 LY6HO94772 140 aa12.75□□□□□ -0.37
CTPS2-201ENST00000359276 CFAP126Q5VTH2 177 aa12.75□□□□□ -0.37
CTPS2-201ENST00000359276 FAM215AQ9Y5M1 114 aa12.75□□□□□ -0.37
CTPS2-201ENST00000359276 TSPAN13O95857 204 aa12.75□□□□□ -0.37
CTPS2-201ENST00000359276 CD59P13987 128 aa12.75□□□□□ -0.37
CTPS2-201ENST00000359276 GAGE5Q13069 117 aa12.75□□□□□ -0.37
CTPS2-201ENST00000359276 GAGE6Q13070 117 aa12.75□□□□□ -0.37
CTPS2-201ENST00000359276 C2orf66Q6UXQ4 117 aa12.75□□□□□ -0.37
CTPS2-201ENST00000359276 PRO0461Q9UI25 63 aa12.75□□□□□ -0.37
CTPS2-201ENST00000359276 RPL39LQ96EH5 51 aaKnown RBP12.75□□□□□ -0.37
CTPS2-201ENST00000359276 TRBV7-3A0A075B6L6 115 aa12.74□□□□□ -0.37
CTPS2-201ENST00000359276 ZNF688P0C7X2 276 aa12.74□□□□□ -0.37
CTPS2-201ENST00000359276 TEN1Q86WV5 123 aa12.74□□□□□ -0.37
CTPS2-201ENST00000359276 PRSS2P07478 247 aa12.74□□□□□ -0.37
CTPS2-201ENST00000359276 NDPQ00604 133 aa12.74□□□□□ -0.37
CTPS2-201ENST00000359276 IGKV3D-20A0A0C4DH25 116 aa12.74□□□□□ -0.37
CTPS2-201ENST00000359276 TCL1BO95988 128 aa12.74□□□□□ -0.37
CTPS2-201ENST00000359276 SMCPP49901 116 aaPredicted RBP12.74□□□□□ -0.37
CTPS2-201ENST00000359276 LINC01559Q495D7 138 aa12.74□□□□□ -0.37
CTPS2-201ENST00000359276 SMIM20Q8N5G0 67 aa12.74□□□□□ -0.37
CTPS2-201ENST00000359276 ANKRD29Q8N6D5 301 aa12.74□□□□□ -0.37
CTPS2-201ENST00000359276 SMIM2Q9BVW6 85 aa12.74□□□□□ -0.37
CTPS2-201ENST00000359276 C2CD3Q4AC94 2353 aa12.73□□□□□ -0.37
CTPS2-201ENST00000359276 C16orf92Q96LL3 132 aa12.73□□□□□ -0.37
CTPS2-201ENST00000359276 AGPAT4-IT1Q9H0P7 198 aa12.73□□□□□ -0.37
CTPS2-201ENST00000359276 DPM3Q9P2X0 92 aa12.73□□□□□ -0.37
CTPS2-201ENST00000359276 ZFHX2Q9C0A1 2572 aaPredicted RBP12.73□□□□□ -0.37
CTPS2-201ENST00000359276 CSMD1Q96PZ7 3565 aa12.73□□□□□ -0.37
CTPS2-201ENST00000359276 TRAV2A0A0B4J234 112 aa12.73□□□□□ -0.37
CTPS2-201ENST00000359276 TNRC18O15417 2968 aaPredicted RBP12.73□□□□□ -0.37
CTPS2-201ENST00000359276 ORMDL2Q53FV1 153 aa12.73□□□□□ -0.37
CTPS2-201ENST00000359276 OR11H6Q8NGC7 330 aa12.73□□□□□ -0.37
CTPS2-201ENST00000359276 PIFOQ8TCI5 191 aa12.73□□□□□ -0.37
CTPS2-201ENST00000359276 SUMO2P61956 95 aaKnown RBP12.72□□□□□ -0.37
CTPS2-201ENST00000359276 CLEC19AQ6UXS0 136 aa12.72□□□□□ -0.37
CTPS2-201ENST00000359276 C3orf56Q8N813 242 aa12.72□□□□□ -0.37
CTPS2-201ENST00000359276 MRPS12O15235 138 aaKnown RBP12.71□□□□□ -0.37
CTPS2-201ENST00000359276 CRYGBP07316 175 aa12.71□□□□□ -0.37
CTPS2-201ENST00000359276 C11orf21Q9P2W6 132 aa12.71□□□□□ -0.37
CTPS2-201ENST00000359276 ERG28Q9UKR5 140 aa12.71□□□□□ -0.37
CTPS2-201ENST00000359276 SPG11Q96JI7 2443 aa12.7□□□□□ -0.38
CTPS2-201ENST00000359276 TMEM262E9PQX1 116 aa12.7□□□□□ -0.38
CTPS2-201ENST00000359276 IGLV1-47P01700 117 aa12.7□□□□□ -0.38
CTPS2-201ENST00000359276 FHL3Q13643 280 aa12.7□□□□□ -0.38
CTPS2-201ENST00000359276 TRPT1Q86TN4 253 aaKnown RBP12.7□□□□□ -0.38
CTPS2-201ENST00000359276 LGALS3P17931 250 aaKnown RBP12.7□□□□□ -0.38
CTPS2-201ENST00000359276 C15orf32Q32M92 178 aa12.7□□□□□ -0.38
CTPS2-201ENST00000359276 ANKRD11Q6UB99 2663 aaPredicted RBP12.7□□□□□ -0.38
CTPS2-201ENST00000359276 DMXL1Q9Y485 3027 aa12.7□□□□□ -0.38
CTPS2-201ENST00000359276 BDP1A6H8Y1 2624 aa12.7□□□□□ -0.38
CTPS2-201ENST00000359276 SLC25A20O43772 301 aa12.7□□□□□ -0.38
CTPS2-201ENST00000359276 C5orf64Q2M2E5 130 aa12.7□□□□□ -0.38
CTPS2-201ENST00000359276 DEFB124Q8NES8 71 aa12.69□□□□□ -0.38
CTPS2-201ENST00000359276 SMAD5-AS1Q9Y6J3 95 aa12.69□□□□□ -0.38
CTPS2-201ENST00000359276 DEFB1P60022 68 aa12.69□□□□□ -0.38
CTPS2-201ENST00000359276 FAM74A4Q5TZK3 123 aa12.69□□□□□ -0.38
CTPS2-201ENST00000359276 NTN5Q8WTR8 489 aaPredicted RBP12.69□□□□□ -0.38
CTPS2-201ENST00000359276 CARD19Q96LW7 228 aa12.69□□□□□ -0.38
CTPS2-201ENST00000359276 FANCD2OSQ96PS1 177 aa12.69□□□□□ -0.38
CTPS2-201ENST00000359276 LAMA5O15230 3695 aa12.68□□□□□ -0.38
CTPS2-201ENST00000359276 DUSP14O95147 198 aaKnown RBP12.68□□□□□ -0.38
CTPS2-201ENST00000359276 CTSGP08311 255 aa12.68□□□□□ -0.38
CTPS2-201ENST00000359276 ZNF256Q9Y2P7 627 aaPredicted RBP12.68□□□□□ -0.38
CTPS2-201ENST00000359276 CDX4O14627 284 aaPredicted RBP12.67□□□□□ -0.38
CTPS2-201ENST00000359276 NRACQ8N912 160 aa12.67□□□□□ -0.38
CTPS2-201ENST00000359276 BAALCQ8WXS3 180 aa12.67□□□□□ -0.38
CTPS2-201ENST00000359276 SPENQ96T58 3664 aaKnown RBP12.67□□□□□ -0.38
CTPS2-201ENST00000359276 NDUFA11Q86Y39 141 aa12.67□□□□□ -0.38
CTPS2-201ENST00000359276 NUP37Q8NFH4 326 aa12.67□□□□□ -0.38
CTPS2-201ENST00000359276 PRO1854Q9UHT4 67 aa12.67□□□□□ -0.38
CTPS2-201ENST00000359276 RNASE4P34096 147 aaKnown RBP12.66□□□□□ -0.38
CTPS2-201ENST00000359276 C8orf31Q8N9H6 132 aa12.66□□□□□ -0.38
CTPS2-201ENST00000359276 GAGE12JA6NER3 117 aa12.66□□□□□ -0.38
CTPS2-201ENST00000359276 GAGE7O76087 117 aa12.66□□□□□ -0.38
CTPS2-201ENST00000359276 GAGE12FP0CL80 117 aa12.66□□□□□ -0.38
CTPS2-201ENST00000359276 GAGE12GP0CL81 117 aa12.66□□□□□ -0.38
CTPS2-201ENST00000359276 GAGE12IP0CL82 117 aa12.66□□□□□ -0.38
CTPS2-201ENST00000359276 HERV-K104P63124 156 aa12.66□□□□□ -0.38
CTPS2-201ENST00000359276 GAGE4Q13068 117 aa12.66□□□□□ -0.38
CTPS2-201ENST00000359276 LINC00527Q9UJ94 153 aa12.66□□□□□ -0.38
CTPS2-201ENST00000359276 TP53TG1Q9Y2A0 90 aa12.66□□□□□ -0.38
CTPS2-201ENST00000359276 NPC2P61916 151 aa12.66□□□□□ -0.38
CTPS2-201ENST00000359276 VCX2Q9H322 139 aa12.66□□□□□ -0.38
CTPS2-201ENST00000359276 IGF1P05019 195 aa12.65□□□□□ -0.38
CTPS2-201ENST00000359276 ATP6V0E2Q8NHE4 81 aa12.65□□□□□ -0.38
CTPS2-201ENST00000359276 METTL26Q96S19 204 aa12.65□□□□□ -0.38
CTPS2-201ENST00000359276 MAP1AP78559 2803 aaPredicted RBP12.65□□□□□ -0.38
CTPS2-201ENST00000359276 C11orf86A6NJI1 115 aa12.65□□□□□ -0.38
CTPS2-201ENST00000359276 NACAE9PAV3 2078 aa12.65□□□□□ -0.39
CTPS2-201ENST00000359276 IGLV2-18A0A075B6J9 118 aa12.64□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 64.3 ms