RNA–Protein interactions for RNA: ENST00000358170.6

CD46-205, Transcript of CD46 molecule, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD46, Length 3,371 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-205ENST00000358170 PRR9Q5T870 116 aa6.34□□□□□ -1.4
CD46-205ENST00000358170 NEGR1Q7Z3B1 354 aa6.34□□□□□ -1.4
CD46-205ENST00000358170 C20orf173Q96LM9 149 aa6.34□□□□□ -1.4
CD46-205ENST00000358170 HTN1P15515 57 aa6.33□□□□□ -1.4
CD46-205ENST00000358170 CCL19Q99731 98 aa6.33□□□□□ -1.4
CD46-205ENST00000358170 MS4A6AQ9H2W1 248 aa6.33□□□□□ -1.4
CD46-205ENST00000358170 JMJD1CQ15652 2540 aa6.33□□□□□ -1.4
CD46-205ENST00000358170 SLC50A1Q9BRV3 221 aa6.33□□□□□ -1.4
CD46-205ENST00000358170 MOB4Q9Y3A3 225 aa6.33□□□□□ -1.4
CD46-205ENST00000358170 GNRH2O43555 120 aa6.32□□□□□ -1.4
CD46-205ENST00000358170 SMIM17P0DL12 118 aa6.32□□□□□ -1.4
CD46-205ENST00000358170 PCP4P48539 62 aa6.32□□□□□ -1.4
CD46-205ENST00000358170 C2orf91Q6ZV80 131 aa6.32□□□□□ -1.4
CD46-205ENST00000358170 ZNF48Q96MX3 618 aaPredicted RBP6.32□□□□□ -1.4
CD46-205ENST00000358170 DUX5Q96PT3 197 aa6.32□□□□□ -1.4
CD46-205ENST00000358170 IGHV4-30-2A0A087WSY4 118 aa6.32□□□□□ -1.4
CD46-205ENST00000358170 IGKV2D-26A0A0A0MRZ7 120 aa6.32□□□□□ -1.4
CD46-205ENST00000358170 IGHV1-69DA0A0B4J2H0 117 aa6.32□□□□□ -1.4
CD46-205ENST00000358170 IGHV1-69P01742 117 aa6.32□□□□□ -1.4
CD46-205ENST00000358170 ZC2HC1BQ5TFG8 222 aa6.32□□□□□ -1.4
CD46-205ENST00000358170 ZNF575Q86XF7 245 aa6.32□□□□□ -1.4
CD46-205ENST00000358170 OR2K2Q8NGT1 345 aa6.32□□□□□ -1.4
CD46-205ENST00000358170 OR10J6PQ8NGY7 276 aa6.32□□□□□ -1.4
CD46-205ENST00000358170 VPS25Q9BRG1 176 aa6.32□□□□□ -1.4
CD46-205ENST00000358170 PHLDA3Q9Y5J5 127 aa6.32□□□□□ -1.4
CD46-205ENST00000358170 TRBV7-1A0A0A6YYK4 115 aa6.32□□□□□ -1.4
CD46-205ENST00000358170 F5H697 171 aa6.32□□□□□ -1.4
CD46-205ENST00000358170 HIST2H2BDQ6DRA6 164 aa6.32□□□□□ -1.4
CD46-205ENST00000358170 CLEC2AQ6UVW9 174 aa6.32□□□□□ -1.4
CD46-205ENST00000358170 C10orf99Q6UWK7 81 aa6.32□□□□□ -1.4
CD46-205ENST00000358170 DEFB125Q8N687 156 aa6.32□□□□□ -1.4
CD46-205ENST00000358170 OR4X2Q8NGF9 303 aa6.32□□□□□ -1.4
CD46-205ENST00000358170 TMEM8BA6NDV4 472 aa6.31□□□□□ -1.4
CD46-205ENST00000358170 GAGE10A6NGK3 116 aa6.31□□□□□ -1.4
CD46-205ENST00000358170 RAB9AP51151 201 aa6.31□□□□□ -1.4
CD46-205ENST00000358170 EMP1P54849 157 aa6.31□□□□□ -1.4
CD46-205ENST00000358170 MYOZ3Q8TDC0 251 aa6.31□□□□□ -1.4
CD46-205ENST00000358170 PPP1R14DQ9NXH3 145 aa6.31□□□□□ -1.4
CD46-205ENST00000358170 RPL39LQ96EH5 51 aaKnown RBP6.31□□□□□ -1.4
CD46-205ENST00000358170 PIMREGQ9BSJ6 248 aa6.31□□□□□ -1.4
CD46-205ENST00000358170 K7ERJ3 54 aa6.31□□□□□ -1.4
CD46-205ENST00000358170 LGALS9BQ3B8N2 356 aa6.31□□□□□ -1.4
CD46-205ENST00000358170 ANXA2RQ3ZCQ2 193 aa6.31□□□□□ -1.4
CD46-205ENST00000358170 FAM74A4Q5TZK3 123 aa6.31□□□□□ -1.4
CD46-205ENST00000358170 LGALS9CQ6DKI2 356 aa6.31□□□□□ -1.4
CD46-205ENST00000358170 RHPN1-AS1Q9BWJ2 59 aa6.31□□□□□ -1.4
CD46-205ENST00000358170 MRPL35Q9NZE8 188 aaKnown RBP6.31□□□□□ -1.4
CD46-205ENST00000358170 CBY1Q9Y3M2 126 aa6.31□□□□□ -1.4
CD46-205ENST00000358170 PRRC2AP48634 2157 aaKnown RBP6.3□□□□□ -1.4
CD46-205ENST00000358170 TEX15Q9BXT5 2789 aa6.3□□□□□ -1.4
CD46-205ENST00000358170 PIFOQ8TCI5 191 aa6.3□□□□□ -1.4
CD46-205ENST00000358170 NPFFR1Q9GZQ6 430 aa6.3□□□□□ -1.4
CD46-205ENST00000358170 U3KQK5 164 aa6.3□□□□□ -1.4
CD46-205ENST00000358170 PPBPP02775 128 aa6.3□□□□□ -1.4
CD46-205ENST00000358170 LINC01559Q495D7 138 aa6.3□□□□□ -1.4
CD46-205ENST00000358170 JPT2Q9H910 190 aa6.3□□□□□ -1.4
CD46-205ENST00000358170 NXT2Q9NPJ8 142 aaKnown RBP6.3□□□□□ -1.4
CD46-205ENST00000358170 A0A087WWL8 130 aa6.29□□□□□ -1.4
CD46-205ENST00000358170 CD5LO43866 347 aa6.29□□□□□ -1.4
CD46-205ENST00000358170 AVPP01185 164 aa6.29□□□□□ -1.4
CD46-205ENST00000358170 ZNF688P0C7X2 276 aa6.29□□□□□ -1.4
CD46-205ENST00000358170 TRAV12-2A0A075B6T6 113 aa6.29□□□□□ -1.4
CD46-205ENST00000358170 IGKCP01834 107 aa6.29□□□□□ -1.4
CD46-205ENST00000358170 SFTA2Q6UW10 78 aa6.29□□□□□ -1.4
CD46-205ENST00000358170 PEF1Q9UBV8 284 aaKnown RBP6.29□□□□□ -1.4
CD46-205ENST00000358170 TRAV12-3A0A0B4J271 114 aa6.29□□□□□ -1.4
CD46-205ENST00000358170 IGHV7-4-1A0A0J9YVY3 117 aa6.29□□□□□ -1.4
CD46-205ENST00000358170 GAGE12BA1L429 117 aa6.29□□□□□ -1.4
CD46-205ENST00000358170 FGF6P10767 208 aa6.29□□□□□ -1.4
CD46-205ENST00000358170 LAGE3Q14657 143 aa6.29□□□□□ -1.4
CD46-205ENST00000358170 NHP2Q9NX24 153 aaKnown RBP6.29□□□□□ -1.4
CD46-205ENST00000358170 FBN2P35556 2912 aa6.29□□□□□ -1.4
CD46-205ENST00000358170 NF1P21359 2839 aa6.28□□□□□ -1.4
CD46-205ENST00000358170 A6NDN8 102 aa6.28□□□□□ -1.4
CD46-205ENST00000358170 SCGB2A2Q13296 93 aa6.28□□□□□ -1.4
CD46-205ENST00000358170 ODF1Q14990 250 aa6.28□□□□□ -1.4
CD46-205ENST00000358170 MXRA5Q9NR99 2828 aa6.28□□□□□ -1.4
CD46-205ENST00000358170 PRB1P04280 392 aa6.28□□□□□ -1.4
CD46-205ENST00000358170 ASIPP42127 132 aa6.28□□□□□ -1.4
CD46-205ENST00000358170 BOD1L2Q8IYS8 172 aa6.28□□□□□ -1.4
CD46-205ENST00000358170 SCGB3A1Q96QR1 104 aa6.28□□□□□ -1.4
CD46-205ENST00000358170 A0A0G2JLM5 398 aa6.27□□□□□ -1.4
CD46-205ENST00000358170 DPM2O94777 84 aa6.27□□□□□ -1.4
CD46-205ENST00000358170 IGHV4-59P01825 116 aa6.27□□□□□ -1.4
CD46-205ENST00000358170 Q8N8P6 123 aa6.27□□□□□ -1.4
CD46-205ENST00000358170 GATD1Q8NB37 220 aa6.27□□□□□ -1.4
CD46-205ENST00000358170 DPF1Q92782 380 aa6.27□□□□□ -1.4
CD46-205ENST00000358170 TGFAP01135 160 aa6.27□□□□□ -1.41
CD46-205ENST00000358170 CD7P09564 240 aa6.27□□□□□ -1.41
CD46-205ENST00000358170 FXYD2P54710 66 aa6.27□□□□□ -1.41
CD46-205ENST00000358170 KHDC1LQ5JSQ8 128 aa6.27□□□□□ -1.41
CD46-205ENST00000358170 C9orf139Q6ZV77 190 aa6.27□□□□□ -1.41
CD46-205ENST00000358170 MTURNQ8N3F0 131 aa6.27□□□□□ -1.41
CD46-205ENST00000358170 CST9LQ9H4G1 147 aa6.27□□□□□ -1.41
CD46-205ENST00000358170 TRAV21A0A0B4J279 112 aa6.27□□□□□ -1.41
CD46-205ENST00000358170 SAP30O75446 220 aa6.27□□□□□ -1.41
CD46-205ENST00000358170 SRSF1Q07955 248 aaKnown RBP eCLIP6.27□□□□□ -1.414e-6■■■□□ 17.3
CD46-205ENST00000358170 PSMG4Q5JS54 123 aa6.27□□□□□ -1.41
CD46-205ENST00000358170 C9orf47Q6ZRZ4 202 aa6.27□□□□□ -1.41
CD46-205ENST00000358170 LINC00477Q96M19 166 aa6.27□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 63.3 ms