RNA–Protein interactions for RNA: ENST00000356141.8

NPAS3-202, Transcript of neuronal PAS domain protein 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NPAS3, Length 2,802 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3-202ENST00000356141 SLURP1P55000 103 aa13.39□□□□□ -0.27
NPAS3-202ENST00000356141 FAM162BQ5T6X4 162 aa13.39□□□□□ -0.27
NPAS3-202ENST00000356141 RNASEKQ6P5S7 137 aaKnown RBP13.39□□□□□ -0.27
NPAS3-202ENST00000356141 FSHBP01225 129 aa13.38□□□□□ -0.27
NPAS3-202ENST00000356141 HLA-DQA1P01909 254 aa13.38□□□□□ -0.27
NPAS3-202ENST00000356141 PRR9Q5T870 116 aa13.38□□□□□ -0.27
NPAS3-202ENST00000356141 PGPEP1Q9NXJ5 209 aa13.38□□□□□ -0.27
NPAS3-202ENST00000356141 ZNF492Q9P255 531 aa13.38□□□□□ -0.27
NPAS3-202ENST00000356141 SPATA45Q537H7 98 aa13.38□□□□□ -0.27
NPAS3-202ENST00000356141 LRRC75A-AS1Q8N1F1 130 aa13.38□□□□□ -0.27
NPAS3-202ENST00000356141 TMEM190Q8WZ59 177 aa13.38□□□□□ -0.27
NPAS3-202ENST00000356141 TMEM78Q5T7P6 136 aa13.37□□□□□ -0.27
NPAS3-202ENST00000356141 ESM1Q9NQ30 184 aa13.37□□□□□ -0.27
NPAS3-202ENST00000356141 C11orf21Q9P2W6 132 aa13.37□□□□□ -0.27
NPAS3-202ENST00000356141 SMKR1H3BMG3 65 aa13.37□□□□□ -0.27
NPAS3-202ENST00000356141 ZNF688P0C7X2 276 aa13.37□□□□□ -0.27
NPAS3-202ENST00000356141 FXYD7P58549 80 aa13.37□□□□□ -0.27
NPAS3-202ENST00000356141 DAZ1Q9NQZ3 744 aaKnown RBP13.37□□□□□ -0.27
NPAS3-202ENST00000356141 AMTP48728 403 aa13.36□□□□□ -0.27
NPAS3-202ENST00000356141 CRYBA4P53673 196 aa13.36□□□□□ -0.27
NPAS3-202ENST00000356141 TRAV9-1A0A075B6T8 112 aa13.36□□□□□ -0.27
NPAS3-202ENST00000356141 KRTDAPP60985 99 aa13.36□□□□□ -0.27
NPAS3-202ENST00000356141 VCX2Q9H322 139 aa13.36□□□□□ -0.27
NPAS3-202ENST00000356141 U3KQE9 123 aa13.36□□□□□ -0.27
NPAS3-202ENST00000356141 IGHV7-4-1A0A0J9YVY3 117 aa13.35□□□□□ -0.27
NPAS3-202ENST00000356141 TNFRSF6BO95407 300 aa13.35□□□□□ -0.27
NPAS3-202ENST00000356141 SAMD13Q5VXD3 122 aa13.35□□□□□ -0.27
NPAS3-202ENST00000356141 KLHDC1Q8N7A1 406 aa13.35□□□□□ -0.27
NPAS3-202ENST00000356141 C18orf32Q8TCD1 76 aa13.35□□□□□ -0.27
NPAS3-202ENST00000356141 UQCR10Q9UDW1 63 aa13.35□□□□□ -0.27
NPAS3-202ENST00000356141 LOC389332A0A1B0GUA5 103 aa13.35□□□□□ -0.27
NPAS3-202ENST00000356141 NPIPB6E9PJ23 425 aa13.35□□□□□ -0.27
NPAS3-202ENST00000356141 NDFIP1Q9BT67 221 aa13.35□□□□□ -0.27
NPAS3-202ENST00000356141 A0A1B0GXF2 115 aa13.35□□□□□ -0.27
NPAS3-202ENST00000356141 TWIST1Q15672 202 aa13.35□□□□□ -0.27
NPAS3-202ENST00000356141 FAM106AQ4KMX7 169 aa13.35□□□□□ -0.27
NPAS3-202ENST00000356141 TRAV26-1A0A087WT03 109 aa13.34□□□□□ -0.27
NPAS3-202ENST00000356141 A0A1B0GUT8 65 aa13.34□□□□□ -0.27
NPAS3-202ENST00000356141 DNAJC9-AS1A6NH13 148 aa13.34□□□□□ -0.27
NPAS3-202ENST00000356141 H0Y8G0 127 aa13.34□□□□□ -0.27
NPAS3-202ENST00000356141 NCR2O95944 276 aa13.34□□□□□ -0.27
NPAS3-202ENST00000356141 HOXD3P31249 432 aaPredicted RBP13.34□□□□□ -0.27
NPAS3-202ENST00000356141 AMN1Q8IY45 258 aa13.34□□□□□ -0.27
NPAS3-202ENST00000356141 SLC50A1Q9BRV3 221 aa13.34□□□□□ -0.27
NPAS3-202ENST00000356141 KLK9Q2XQG4 91 aa13.34□□□□□ -0.27
NPAS3-202ENST00000356141 NRN1Q9NPD7 142 aa13.34□□□□□ -0.27
NPAS3-202ENST00000356141 KLK9Q9UKQ9 250 aa13.34□□□□□ -0.27
NPAS3-202ENST00000356141 A0A1W2PS18 150 aa13.33□□□□□ -0.28
NPAS3-202ENST00000356141 SIVA1O15304 175 aa13.33□□□□□ -0.28
NPAS3-202ENST00000356141 MT-ND6P03923 174 aa13.33□□□□□ -0.28
NPAS3-202ENST00000356141 MCRIP2Q9BUT9 160 aaKnown RBP13.33□□□□□ -0.28
NPAS3-202ENST00000356141 A0A087X0K7 114 aa13.33□□□□□ -0.28
NPAS3-202ENST00000356141 A0A1B0GV72 72 aa13.33□□□□□ -0.28
NPAS3-202ENST00000356141 DPF1Q92782 380 aa13.33□□□□□ -0.28
NPAS3-202ENST00000356141 HIVEP1P15822 2718 aa13.32□□□□□ -0.28
NPAS3-202ENST00000356141 GAS8-AS1O95177 125 aa13.32□□□□□ -0.28
NPAS3-202ENST00000356141 ATOH7Q8N100 152 aa13.32□□□□□ -0.28
NPAS3-202ENST00000356141 SMPXQ9UHP9 88 aa13.32□□□□□ -0.28
NPAS3-202ENST00000356141 RNASE4P34096 147 aaKnown RBP13.32□□□□□ -0.28
NPAS3-202ENST00000356141 TCTEX1D4Q5JR98 221 aa13.32□□□□□ -0.28
NPAS3-202ENST00000356141 PSMG4Q5JS54 123 aa13.32□□□□□ -0.28
NPAS3-202ENST00000356141 OR4B1Q8NGF8 309 aa13.32□□□□□ -0.28
NPAS3-202ENST00000356141 NIT1Q86X76 327 aa13.31□□□□□ -0.28
NPAS3-202ENST00000356141 OR11H1Q8NG94 326 aa13.31□□□□□ -0.28
NPAS3-202ENST00000356141 DEFB104AQ8WTQ1 72 aa13.31□□□□□ -0.28
NPAS3-202ENST00000356141 H3BUA1 57 aa13.31□□□□□ -0.28
NPAS3-202ENST00000356141 IGLC3P0DOY3 106 aa13.31□□□□□ -0.28
NPAS3-202ENST00000356141 ZNF575Q86XF7 245 aa13.31□□□□□ -0.28
NPAS3-202ENST00000356141 IGKV3D-20A0A0C4DH25 116 aa13.31□□□□□ -0.28
NPAS3-202ENST00000356141 TRAV12-2A0A075B6T6 113 aa13.3□□□□□ -0.28
NPAS3-202ENST00000356141 FABP5P3A8MUU1 101 aa13.3□□□□□ -0.28
NPAS3-202ENST00000356141 KRTAP1-1Q07627 177 aa13.3□□□□□ -0.28
NPAS3-202ENST00000356141 Q6ZSV7 163 aa13.3□□□□□ -0.28
NPAS3-202ENST00000356141 FER1L6-AS1Q8NA97 138 aa13.3□□□□□ -0.28
NPAS3-202ENST00000356141 KLHL30-AS1Q8NEE0 82 aa13.3□□□□□ -0.28
NPAS3-202ENST00000356141 GAGE12BA1L429 117 aa13.3□□□□□ -0.28
NPAS3-202ENST00000356141 HSBP1O75506 76 aa13.29□□□□□ -0.28
NPAS3-202ENST00000356141 CT83Q5H943 113 aa13.29□□□□□ -0.28
NPAS3-202ENST00000356141 AMMECR1LQ6DCA0 310 aa13.29□□□□□ -0.28
NPAS3-202ENST00000356141 VWFP04275 2813 aa13.29□□□□□ -0.28
NPAS3-202ENST00000356141 OR10J6PQ8NGY7 276 aa13.29□□□□□ -0.28
NPAS3-202ENST00000356141 OR10AG1Q8NH19 301 aa13.29□□□□□ -0.28
NPAS3-202ENST00000356141 BORCS7Q96B45 105 aa13.29□□□□□ -0.28
NPAS3-202ENST00000356141 MS4A6AQ9H2W1 248 aa13.29□□□□□ -0.28
NPAS3-202ENST00000356141 H3BVH4 76 aa13.28□□□□□ -0.28
NPAS3-202ENST00000356141 LINC00173Q6ZV60 143 aa13.28□□□□□ -0.28
NPAS3-202ENST00000356141 TNFRSF18Q9Y5U5 241 aa13.28□□□□□ -0.28
NPAS3-202ENST00000356141 D6R8Y8 96 aa13.28□□□□□ -0.28
NPAS3-202ENST00000356141 HTN1P15515 57 aa13.28□□□□□ -0.28
NPAS3-202ENST00000356141 GATA1P15976 413 aaPredicted RBP13.28□□□□□ -0.28
NPAS3-202ENST00000356141 TSPOP30536 169 aa13.28□□□□□ -0.28
NPAS3-202ENST00000356141 C9orf139Q6ZV77 190 aa13.28□□□□□ -0.28
NPAS3-202ENST00000356141 URB1-AS1Q96HZ7 61 aa13.28□□□□□ -0.28
NPAS3-202ENST00000356141 KCNS1Q96KK3 526 aa13.28□□□□□ -0.28
NPAS3-202ENST00000356141 M0R2Z0 102 aa13.27□□□□□ -0.28
NPAS3-202ENST00000356141 SOCS3O14543 225 aa13.27□□□□□ -0.28
NPAS3-202ENST00000356141 GPX1P07203 203 aa13.27□□□□□ -0.28
NPAS3-202ENST00000356141 LGALS1P09382 135 aaKnown RBP13.27□□□□□ -0.28
NPAS3-202ENST00000356141 EVI2AP22794 236 aa13.27□□□□□ -0.28
NPAS3-202ENST00000356141 OR1N2Q8NGR9 330 aa13.27□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 60.1 ms