RNA–Protein interactions for RNA: ENST00000351677.6

PTPN11-201, Transcript of protein tyrosine phosphatase, non-receptor type 11, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PTPN11, Length 6,101 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN11-201ENST00000351677 GAGE6Q13070 117 aa12.55□□□□□ -0.4
PTPN11-201ENST00000351677 WIPF2Q8TF74 440 aaPredicted RBP12.54□□□□□ -0.4
PTPN11-201ENST00000351677 PYGO2Q9BRQ0 406 aa12.54□□□□□ -0.4
PTPN11-201ENST00000351677 NUPR1O60356 82 aa12.54□□□□□ -0.4
PTPN11-201ENST00000351677 SPRY4Q9C004 299 aa12.54□□□□□ -0.4
PTPN11-201ENST00000351677 K7ERJ3 54 aa12.54□□□□□ -0.4
PTPN11-201ENST00000351677 IGKV1-17P01599 117 aa12.54□□□□□ -0.4
PTPN11-201ENST00000351677 IGHV4-61A0A0C4DH41 118 aa12.54□□□□□ -0.4
PTPN11-201ENST00000351677 ADAMTS9Q9P2N4 1935 aa12.53□□□□□ -0.4
PTPN11-201ENST00000351677 IGHV4-38-2P0DP08 117 aa12.53□□□□□ -0.4
PTPN11-201ENST00000351677 KLF5Q13887 457 aaPredicted RBP12.53□□□□□ -0.4
PTPN11-201ENST00000351677 DEFB136Q30KP8 78 aa12.53□□□□□ -0.4
PTPN11-201ENST00000351677 FREM1Q5H8C1 2179 aa12.53□□□□□ -0.4
PTPN11-201ENST00000351677 INS-IGF2F8WCM5 200 aa12.53□□□□□ -0.4
PTPN11-201ENST00000351677 DAD1P61803 113 aa12.53□□□□□ -0.4
PTPN11-201ENST00000351677 LURAP1LQ8IV03 231 aa12.53□□□□□ -0.4
PTPN11-201ENST00000351677 ELANEP08246 267 aa12.53□□□□□ -0.4
PTPN11-201ENST00000351677 NPBQ8NG41 125 aa12.53□□□□□ -0.4
PTPN11-201ENST00000351677 ZNF747Q9BV97 191 aa12.53□□□□□ -0.4
PTPN11-201ENST00000351677 GAGE2AQ6NT46 116 aa12.52□□□□□ -0.4
PTPN11-201ENST00000351677 OBSL1O75147 1896 aa12.52□□□□□ -0.4
PTPN11-201ENST00000351677 DENND4AQ7Z401 1863 aa12.52□□□□□ -0.4
PTPN11-201ENST00000351677 TMEM243Q9BU79 118 aa12.52□□□□□ -0.41
PTPN11-201ENST00000351677 NCKAP5O14513 1909 aa12.52□□□□□ -0.41
PTPN11-201ENST00000351677 MSMPQ1L6U9 139 aa12.52□□□□□ -0.41
PTPN11-201ENST00000351677 C3orf56Q8N813 242 aa12.52□□□□□ -0.41
PTPN11-201ENST00000351677 NDUFA12Q9UI09 145 aa12.52□□□□□ -0.41
PTPN11-201ENST00000351677 C20orf78Q9BR46 151 aa12.52□□□□□ -0.41
PTPN11-201ENST00000351677 DYSFO75923 2080 aa12.52□□□□□ -0.41
PTPN11-201ENST00000351677 CEND1Q8N111 149 aa12.51□□□□□ -0.41
PTPN11-201ENST00000351677 KIAA1549LQ6ZVL6 1849 aa12.51□□□□□ -0.41
PTPN11-201ENST00000351677 IGLV11-55A0A075B6I3 123 aa12.51□□□□□ -0.41
PTPN11-201ENST00000351677 H3BUA1 57 aa12.51□□□□□ -0.41
PTPN11-201ENST00000351677 E7EUB6 86 aa12.51□□□□□ -0.41
PTPN11-201ENST00000351677 HOXD3P31249 432 aaPredicted RBP12.51□□□□□ -0.41
PTPN11-201ENST00000351677 A0A096LPF7 62 aa12.51□□□□□ -0.41
PTPN11-201ENST00000351677 SPINK8P0C7L1 97 aa12.51□□□□□ -0.41
PTPN11-201ENST00000351677 ODF3L1Q8IXM7 274 aa12.51□□□□□ -0.41
PTPN11-201ENST00000351677 IGF2BP2-AS1Q96M15 143 aa12.51□□□□□ -0.41
PTPN11-201ENST00000351677 IGF2-ASQ6U949 168 aa12.5□□□□□ -0.41
PTPN11-201ENST00000351677 MRPL53Q96EL3 112 aaKnown RBP12.5□□□□□ -0.41
PTPN11-201ENST00000351677 IGHV4-30-2A0A087WSY4 118 aa12.5□□□□□ -0.41
PTPN11-201ENST00000351677 BLCAPP62952 87 aa12.5□□□□□ -0.41
PTPN11-201ENST00000351677 ATP6V0BQ99437 205 aa12.5□□□□□ -0.41
PTPN11-201ENST00000351677 IGLV2-23P01705 113 aa12.5□□□□□ -0.41
PTPN11-201ENST00000351677 CTSGP08311 255 aa12.5□□□□□ -0.41
PTPN11-201ENST00000351677 FAM167A-AS1Q96KT0 104 aa12.5□□□□□ -0.41
PTPN11-201ENST00000351677 VPREB3Q9UKI3 123 aa12.5□□□□□ -0.41
PTPN11-201ENST00000351677 ZNF106Q9H2Y7 1883 aaKnown RBP12.49□□□□□ -0.41
PTPN11-201ENST00000351677 IGKV1OR2-108A0A075B7D4 117 aa12.49□□□□□ -0.41
PTPN11-201ENST00000351677 RBAKDNA6NC62 111 aa12.49□□□□□ -0.41
PTPN11-201ENST00000351677 PSCAO43653 123 aa12.49□□□□□ -0.41
PTPN11-201ENST00000351677 OVOL2Q9BRP0 275 aa12.49□□□□□ -0.41
PTPN11-201ENST00000351677 MSRB1Q9NZV6 116 aa12.49□□□□□ -0.41
PTPN11-201ENST00000351677 LTBP2Q14767 1821 aa12.49□□□□□ -0.41
PTPN11-201ENST00000351677 FGF6P10767 208 aa12.49□□□□□ -0.41
PTPN11-201ENST00000351677 SPAG8Q99932 426 aaPredicted RBP12.49□□□□□ -0.41
PTPN11-201ENST00000351677 ADORA2A-AS1P86434 159 aa12.49□□□□□ -0.41
PTPN11-201ENST00000351677 ETDBQ3ZM63 59 aa12.49□□□□□ -0.41
PTPN11-201ENST00000351677 LINC00173Q6ZV60 143 aa12.49□□□□□ -0.41
PTPN11-201ENST00000351677 J3QQQ9 107 aa12.49□□□□□ -0.41
PTPN11-201ENST00000351677 Q6ZVH6 145 aa12.49□□□□□ -0.41
PTPN11-201ENST00000351677 PRSS29PA6NIE9 313 aa12.48□□□□□ -0.41
PTPN11-201ENST00000351677 FOXI2Q6ZQN5 318 aa12.48□□□□□ -0.41
PTPN11-201ENST00000351677 NXPH4O95158 308 aa12.48□□□□□ -0.41
PTPN11-201ENST00000351677 MRPL36Q9P0J6 103 aaKnown RBP12.48□□□□□ -0.41
PTPN11-201ENST00000351677 K7EP34 96 aa12.48□□□□□ -0.41
PTPN11-201ENST00000351677 PCP2Q8IVA1 136 aa12.48□□□□□ -0.41
PTPN11-201ENST00000351677 TTC28Q96AY4 2481 aa12.48□□□□□ -0.41
PTPN11-201ENST00000351677 A0A1W2PPM0 123 aa12.48□□□□□ -0.41
PTPN11-201ENST00000351677 NCOA6Q14686 2063 aaPredicted RBP12.47□□□□□ -0.41
PTPN11-201ENST00000351677 AJUBAQ96IF1 538 aa12.47□□□□□ -0.41
PTPN11-201ENST00000351677 ZNF48Q96MX3 618 aaPredicted RBP12.47□□□□□ -0.41
PTPN11-201ENST00000351677 Q8N9W7 124 aa12.47□□□□□ -0.41
PTPN11-201ENST00000351677 RPL39LQ96EH5 51 aaKnown RBP12.47□□□□□ -0.41
PTPN11-201ENST00000351677 COA6Q5JTJ3 125 aaKnown RBP12.47□□□□□ -0.41
PTPN11-201ENST00000351677 TEX22C9J3V5 150 aa12.47□□□□□ -0.41
PTPN11-201ENST00000351677 H3BMM0 161 aa12.47□□□□□ -0.41
PTPN11-201ENST00000351677 PLA2G5P39877 138 aa12.47□□□□□ -0.41
PTPN11-201ENST00000351677 UBE2WQ96B02 151 aa12.47□□□□□ -0.41
PTPN11-201ENST00000351677 ARHGAP21Q5T5U3 1957 aa12.47□□□□□ -0.41
PTPN11-201ENST00000351677 TDRG1Q3Y452 100 aa12.46□□□□□ -0.41
PTPN11-201ENST00000351677 TRBV20-1A0A075B6N2 111 aa12.46□□□□□ -0.41
PTPN11-201ENST00000351677 K7EP13 123 aa12.46□□□□□ -0.41
PTPN11-201ENST00000351677 SLURP1P55000 103 aa12.46□□□□□ -0.41
PTPN11-201ENST00000351677 NRGNQ92686 78 aa12.46□□□□□ -0.41
PTPN11-201ENST00000351677 BDP1A6H8Y1 2624 aa12.46□□□□□ -0.41
PTPN11-201ENST00000351677 CLPSL2Q6UWE3 100 aa12.46□□□□□ -0.41
PTPN11-201ENST00000351677 APRG1Q8IVJ8 170 aa12.46□□□□□ -0.41
PTPN11-201ENST00000351677 ZNF493Q6ZR52 646 aa12.46□□□□□ -0.42
PTPN11-201ENST00000351677 NOP10Q9NPE3 64 aaKnown RBP12.46□□□□□ -0.42
PTPN11-201ENST00000351677 PRO1854Q9UHT4 67 aa12.46□□□□□ -0.42
PTPN11-201ENST00000351677 U3KQE9 123 aa12.46□□□□□ -0.42
PTPN11-201ENST00000351677 PCDH15Q96QU1 1955 aa12.46□□□□□ -0.42
PTPN11-201ENST00000351677 PRB1P04280 392 aa12.45□□□□□ -0.42
PTPN11-201ENST00000351677 GTSF1Q8WW33 167 aa12.45□□□□□ -0.42
PTPN11-201ENST00000351677 H3BMG7 143 aa12.45□□□□□ -0.42
PTPN11-201ENST00000351677 ZFP36P26651 326 aaKnown RBP12.45□□□□□ -0.42
PTPN11-201ENST00000351677 DNAJC30Q96LL9 226 aa12.45□□□□□ -0.42
PTPN11-201ENST00000351677 IGKV2D-29A0A075B6S2 120 aaPredicted RBP12.45□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 66 ms