RNA–Protein interactions for RNA: ENST00000348990.9

APP-202, Transcript of amyloid beta precursor protein, humanhuman

TSL 1 (best) BASIC

Gene APP, Length 3,355 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APP-202ENST00000348990 SCGB1C2P0DMR2 95 aa13.74□□□□□ -0.21
APP-202ENST00000348990 PTH2Q96A98 100 aa13.74□□□□□ -0.21
APP-202ENST00000348990 SCGB1A1P11684 91 aa13.73□□□□□ -0.21
APP-202ENST00000348990 CEP295Q9C0D2 2601 aa13.73□□□□□ -0.21
APP-202ENST00000348990 TAL2Q16559 108 aa13.73□□□□□ -0.21
APP-202ENST00000348990 C14orf178Q8N769 122 aaPredicted RBP13.73□□□□□ -0.21
APP-202ENST00000348990 TIMD4Q96H15 378 aa13.73□□□□□ -0.21
APP-202ENST00000348990 C16orf92Q96LL3 132 aa13.73□□□□□ -0.21
APP-202ENST00000348990 PRADC1Q9BSG0 188 aa13.72□□□□□ -0.21
APP-202ENST00000348990 KLHL30-AS1Q8NEE0 82 aa13.72□□□□□ -0.21
APP-202ENST00000348990 SLC25A16P16260 332 aa13.72□□□□□ -0.21
APP-202ENST00000348990 ZNF575Q86XF7 245 aa13.72□□□□□ -0.21
APP-202ENST00000348990 SPINK8P0C7L1 97 aa13.71□□□□□ -0.21
APP-202ENST00000348990 PRR30Q53SZ7 412 aaPredicted RBP13.71□□□□□ -0.21
APP-202ENST00000348990 NRACQ8N912 160 aa13.71□□□□□ -0.21
APP-202ENST00000348990 SMIM2Q9BVW6 85 aa13.71□□□□□ -0.21
APP-202ENST00000348990 CNFNQ9BYD5 112 aa13.71□□□□□ -0.21
APP-202ENST00000348990 CREBBPQ92793 2442 aa13.71□□□□□ -0.21
APP-202ENST00000348990 GLMPQ8WWB7 406 aa13.71□□□□□ -0.21
APP-202ENST00000348990 RPL39LQ96EH5 51 aaKnown RBP13.71□□□□□ -0.21
APP-202ENST00000348990 IGLV2-18A0A075B6J9 118 aa13.71□□□□□ -0.22
APP-202ENST00000348990 TMEM238LA0A1B0GVL6 79 aa13.71□□□□□ -0.22
APP-202ENST00000348990 A6NJY4 79 aa13.71□□□□□ -0.22
APP-202ENST00000348990 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa13.71□□□□□ -0.22
APP-202ENST00000348990 NPBQ8NG41 125 aa13.71□□□□□ -0.22
APP-202ENST00000348990 DLX4Q92988 240 aaPredicted RBP13.71□□□□□ -0.22
APP-202ENST00000348990 PHLDA3Q9Y5J5 127 aa13.71□□□□□ -0.22
APP-202ENST00000348990 TRAV26-1A0A087WT03 109 aa13.7□□□□□ -0.22
APP-202ENST00000348990 GEMIN7Q9H840 131 aaKnown RBP13.7□□□□□ -0.22
APP-202ENST00000348990 BUB3O43684 328 aa13.7□□□□□ -0.22
APP-202ENST00000348990 ZFP2Q6ZN57 461 aa13.7□□□□□ -0.22
APP-202ENST00000348990 SLC50A1Q9BRV3 221 aa13.7□□□□□ -0.22
APP-202ENST00000348990 COX8CQ7Z4L0 72 aa13.69□□□□□ -0.22
APP-202ENST00000348990 VMO1Q7Z5L0 202 aa13.69□□□□□ -0.22
APP-202ENST00000348990 METTL26Q96S19 204 aa13.69□□□□□ -0.22
APP-202ENST00000348990 SPATA25Q9BR10 227 aa13.69□□□□□ -0.22
APP-202ENST00000348990 G3V318 75 aa13.69□□□□□ -0.22
APP-202ENST00000348990 LGALS1P09382 135 aaKnown RBP13.69□□□□□ -0.22
APP-202ENST00000348990 H7C2G1 150 aa13.69□□□□□ -0.22
APP-202ENST00000348990 SUMO2P61956 95 aaKnown RBP13.69□□□□□ -0.22
APP-202ENST00000348990 ORMDL2Q53FV1 153 aa13.69□□□□□ -0.22
APP-202ENST00000348990 C2orf66Q6UXQ4 117 aa13.69□□□□□ -0.22
APP-202ENST00000348990 TRBV7-3A0A075B6L6 115 aa13.68□□□□□ -0.22
APP-202ENST00000348990 DEFB1P60022 68 aa13.68□□□□□ -0.22
APP-202ENST00000348990 FOXI1Q12951 378 aa13.68□□□□□ -0.22
APP-202ENST00000348990 LINC00527Q9UJ94 153 aa13.68□□□□□ -0.22
APP-202ENST00000348990 IGF1P05019 195 aa13.68□□□□□ -0.22
APP-202ENST00000348990 PIP4P1Q86T03 277 aa13.68□□□□□ -0.22
APP-202ENST00000348990 AKAP13Q12802 2813 aa13.68□□□□□ -0.22
APP-202ENST00000348990 PRSS29PA6NIE9 313 aa13.68□□□□□ -0.22
APP-202ENST00000348990 C8orf86Q6ZUL3 223 aa13.67□□□□□ -0.22
APP-202ENST00000348990 PLEKHB2Q96CS7 222 aa13.67□□□□□ -0.22
APP-202ENST00000348990 IGHV7-81A0A0B4J1V7 117 aa13.67□□□□□ -0.22
APP-202ENST00000348990 GRNP28799 593 aaKnown RBP13.66□□□□□ -0.22
APP-202ENST00000348990 MORN3Q6PF18 240 aaPredicted RBP13.66□□□□□ -0.22
APP-202ENST00000348990 IGHV7-4-1A0A0J9YVY3 117 aa13.66□□□□□ -0.22
APP-202ENST00000348990 OR11H6Q8NGC7 330 aa13.66□□□□□ -0.22
APP-202ENST00000348990 MRAP2Q96G30 205 aa13.66□□□□□ -0.22
APP-202ENST00000348990 F5H697 171 aa13.66□□□□□ -0.22
APP-202ENST00000348990 TMEM170BQ5T4T1 132 aa13.66□□□□□ -0.22
APP-202ENST00000348990 SRSF2Q01130 221 aaKnown RBP13.65□□□□□ -0.22
APP-202ENST00000348990 ZNF48Q96MX3 618 aaPredicted RBP13.65□□□□□ -0.22
APP-202ENST00000348990 C1QTNF4Q9BXJ3 329 aa13.65□□□□□ -0.22
APP-202ENST00000348990 MT-ATP8P03928 68 aa13.65□□□□□ -0.22
APP-202ENST00000348990 PRTN3P24158 256 aa13.65□□□□□ -0.22
APP-202ENST00000348990 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP13.65□□□□□ -0.22
APP-202ENST00000348990 ATP6V0E1O15342 81 aa13.65□□□□□ -0.23
APP-202ENST00000348990 PRO0461Q9UI25 63 aa13.65□□□□□ -0.23
APP-202ENST00000348990 ATRXP46100 2492 aa13.64□□□□□ -0.23
APP-202ENST00000348990 LINC01546A6NGU7 62 aa13.64□□□□□ -0.23
APP-202ENST00000348990 CRYBA4P53673 196 aa13.64□□□□□ -0.23
APP-202ENST00000348990 RNASE4P34096 147 aaKnown RBP13.63□□□□□ -0.23
APP-202ENST00000348990 BAALCQ8WXS3 180 aa13.63□□□□□ -0.23
APP-202ENST00000348990 SVEP1Q4LDE5 3571 aa13.63□□□□□ -0.23
APP-202ENST00000348990 ASIPP42127 132 aa13.62□□□□□ -0.23
APP-202ENST00000348990 HERVK_113P61574 105 aa13.62□□□□□ -0.23
APP-202ENST00000348990 PRR9Q5T870 116 aa13.62□□□□□ -0.23
APP-202ENST00000348990 NFE4Q86UQ8 179 aa13.62□□□□□ -0.23
APP-202ENST00000348990 ASH1LQ9NR48 2969 aaKnown RBP13.62□□□□□ -0.23
APP-202ENST00000348990 RBAKDNA6NC62 111 aa13.62□□□□□ -0.23
APP-202ENST00000348990 LINC01548A6NM66 108 aa13.62□□□□□ -0.23
APP-202ENST00000348990 DUSP14O95147 198 aaKnown RBP13.62□□□□□ -0.23
APP-202ENST00000348990 TSPAN13O95857 204 aa13.62□□□□□ -0.23
APP-202ENST00000348990 RASL10AQ92737 203 aa13.62□□□□□ -0.23
APP-202ENST00000348990 DPH3P1Q9H4G8 78 aa13.62□□□□□ -0.23
APP-202ENST00000348990 TRAV8-2A0A0B4J237 113 aa13.61□□□□□ -0.23
APP-202ENST00000348990 TRAV12-1A0A0B4J245 112 aa13.61□□□□□ -0.23
APP-202ENST00000348990 NEXN-AS1Q8NBZ9 246 aa13.61□□□□□ -0.23
APP-202ENST00000348990 RAX2Q96IS3 184 aa13.61□□□□□ -0.23
APP-202ENST00000348990 ZFAND3Q9H8U3 227 aa13.61□□□□□ -0.23
APP-202ENST00000348990 MSRB2Q9Y3D2 182 aa13.61□□□□□ -0.23
APP-202ENST00000348990 LYRM7Q5U5X0 104 aa13.61□□□□□ -0.23
APP-202ENST00000348990 CFAP126Q5VTH2 177 aa13.61□□□□□ -0.23
APP-202ENST00000348990 OR10J6PQ8NGY7 276 aa13.61□□□□□ -0.23
APP-202ENST00000348990 EEF1AKMT3Q96AZ1 226 aa13.6□□□□□ -0.23
APP-202ENST00000348990 TOMM6Q96B49 74 aa13.6□□□□□ -0.23
APP-202ENST00000348990 GNRH2O43555 120 aa13.6□□□□□ -0.23
APP-202ENST00000348990 LY6G5BQ8NDX9 201 aa13.6□□□□□ -0.23
APP-202ENST00000348990 SORL1Q92673 2214 aa13.6□□□□□ -0.23
APP-202ENST00000348990 SMCPP49901 116 aaPredicted RBP13.6□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 66 ms