RNA–Protein interactions for RNA: ENST00000343575.10

CXCL12-201, Transcript of C-X-C motif chemokine ligand 12, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CXCL12, Length 1,857 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12-201ENST00000343575 KRTAP24-1Q3LI83 254 aa11.12□□□□□ -0.63
CXCL12-201ENST00000343575 MPV17L2Q567V2 206 aa11.12□□□□□ -0.63
CXCL12-201ENST00000343575 FMC1Q96HJ9 113 aa11.12□□□□□ -0.63
CXCL12-201ENST00000343575 RHPN1-AS1Q9BWJ2 59 aa11.12□□□□□ -0.63
CXCL12-201ENST00000343575 CST9LQ9H4G1 147 aa11.12□□□□□ -0.63
CXCL12-201ENST00000343575 EPDR1Q9UM22 224 aa11.12□□□□□ -0.63
CXCL12-201ENST00000343575 UFC1Q9Y3C8 167 aa11.12□□□□□ -0.63
CXCL12-201ENST00000343575 SELENOKQ9Y6D0 94 aa11.12□□□□□ -0.63
CXCL12-201ENST00000343575 CCL24O00175 119 aa11.11□□□□□ -0.63
CXCL12-201ENST00000343575 NUDT3O95989 172 aa11.11□□□□□ -0.63
CXCL12-201ENST00000343575 SIGLEC15Q6ZMC9 328 aa11.11□□□□□ -0.63
CXCL12-201ENST00000343575 DPF1Q92782 380 aa11.11□□□□□ -0.63
CXCL12-201ENST00000343575 CAMPP49913 170 aa11.1□□□□□ -0.63
CXCL12-201ENST00000343575 SEC11AP67812 179 aa11.1□□□□□ -0.63
CXCL12-201ENST00000343575 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa11.1□□□□□ -0.63
CXCL12-201ENST00000343575 RBPMS2Q6ZRY4 209 aaKnown RBP11.1□□□□□ -0.63
CXCL12-201ENST00000343575 VPS25Q9BRG1 176 aa11.1□□□□□ -0.63
CXCL12-201ENST00000343575 Q9H3A6 140 aa11.1□□□□□ -0.63
CXCL12-201ENST00000343575 SCRT2Q9NQ03 307 aa11.1□□□□□ -0.63
CXCL12-201ENST00000343575 FBN1P35555 2871 aaKnown RBP11.1□□□□□ -0.63
CXCL12-201ENST00000343575 A0A087X0K7 114 aa11.1□□□□□ -0.63
CXCL12-201ENST00000343575 IGHV1-24A0A0C4DH33 117 aa11.1□□□□□ -0.63
CXCL12-201ENST00000343575 S100A7P31151 101 aa11.1□□□□□ -0.63
CXCL12-201ENST00000343575 RNF151Q2KHN1 245 aa11.1□□□□□ -0.63
CXCL12-201ENST00000343575 SPATA12Q7Z6I5 190 aa11.1□□□□□ -0.63
CXCL12-201ENST00000343575 EXOC3-AS1Q8N2X6 119 aa11.1□□□□□ -0.63
CXCL12-201ENST00000343575 URB1-AS1Q96HZ7 61 aa11.1□□□□□ -0.63
CXCL12-201ENST00000343575 MLST8Q9BVC4 326 aa11.1□□□□□ -0.63
CXCL12-201ENST00000343575 RNF24Q9Y225 148 aa11.1□□□□□ -0.63
CXCL12-201ENST00000343575 A0A1B0GW15 77 aa11.09□□□□□ -0.63
CXCL12-201ENST00000343575 PGPA6NDG6 321 aa11.09□□□□□ -0.63
CXCL12-201ENST00000343575 P01737 135 aa11.09□□□□□ -0.63
CXCL12-201ENST00000343575 PDE6HQ13956 83 aa11.09□□□□□ -0.63
CXCL12-201ENST00000343575 DAZAP1Q96EP5 407 aaKnown RBP11.09□□□□□ -0.63
CXCL12-201ENST00000343575 CLEC5AQ9NY25 188 aa11.09□□□□□ -0.63
CXCL12-201ENST00000343575 SLC25A5P05141 298 aaKnown RBP11.08□□□□□ -0.64
CXCL12-201ENST00000343575 NSUN5P1Q3KNT7 163 aa11.08□□□□□ -0.64
CXCL12-201ENST00000343575 IGFL4Q6B9Z1 124 aa11.08□□□□□ -0.64
CXCL12-201ENST00000343575 PRR27Q6MZM9 219 aa11.08□□□□□ -0.64
CXCL12-201ENST00000343575 Q6ZVH6 145 aa11.08□□□□□ -0.64
CXCL12-201ENST00000343575 NDUFA11Q86Y39 141 aa11.08□□□□□ -0.64
CXCL12-201ENST00000343575 C5orf17Q8NAS9 161 aa11.08□□□□□ -0.64
CXCL12-201ENST00000343575 LINC00479Q96M42 142 aa11.08□□□□□ -0.64
CXCL12-201ENST00000343575 SSBP4Q9BWG4 385 aaPredicted RBP11.08□□□□□ -0.64
CXCL12-201ENST00000343575 LOC102724200A0A096LPH7 203 aaPredicted RBP11.08□□□□□ -0.64
CXCL12-201ENST00000343575 C19orf71A6NCJ1 209 aa11.08□□□□□ -0.64
CXCL12-201ENST00000343575 PRB4P10163 310 aaPredicted RBP11.08□□□□□ -0.64
CXCL12-201ENST00000343575 OR9G4Q8NGQ1 327 aa11.08□□□□□ -0.64
CXCL12-201ENST00000343575 CITED1Q99966 193 aa11.08□□□□□ -0.64
CXCL12-201ENST00000343575 TRAV8-2A0A0B4J237 113 aa11.07□□□□□ -0.64
CXCL12-201ENST00000343575 ZNF785A8K8V0 405 aa11.07□□□□□ -0.64
CXCL12-201ENST00000343575 LTAP01374 205 aa11.07□□□□□ -0.64
CXCL12-201ENST00000343575 CSN3P07498 182 aa11.07□□□□□ -0.64
CXCL12-201ENST00000343575 HLA-DMBP28068 263 aa11.07□□□□□ -0.64
CXCL12-201ENST00000343575 GNG5P63218 68 aa11.07□□□□□ -0.64
CXCL12-201ENST00000343575 LINC01545Q5VT33 79 aa11.07□□□□□ -0.64
CXCL12-201ENST00000343575 OTORQ9NRC9 128 aa11.07□□□□□ -0.64
CXCL12-201ENST00000343575 TRBV6-1A0A0K0K1D8 114 aa11.06□□□□□ -0.64
CXCL12-201ENST00000343575 M0R3E3 92 aa11.06□□□□□ -0.64
CXCL12-201ENST00000343575 SOCS3O14543 225 aa11.06□□□□□ -0.64
CXCL12-201ENST00000343575 COX8AP10176 69 aa11.06□□□□□ -0.64
CXCL12-201ENST00000343575 LYPD1Q8N2G4 141 aa11.06□□□□□ -0.64
CXCL12-201ENST00000343575 MUC21A0A0G2JKD1 596 aa11.06□□□□□ -0.64
CXCL12-201ENST00000343575 MUC21A0A140T8X8 626 aa11.06□□□□□ -0.64
CXCL12-201ENST00000343575 NPIPB6E9PJ23 425 aa11.06□□□□□ -0.64
CXCL12-201ENST00000343575 MUC21Q5SSG8 566 aa11.06□□□□□ -0.64
CXCL12-201ENST00000343575 GTF2H5Q6ZYL4 71 aa11.06□□□□□ -0.64
CXCL12-201ENST00000343575 GATD1Q8NB37 220 aa11.06□□□□□ -0.64
CXCL12-201ENST00000343575 FOXA3P55318 350 aaPredicted RBP11.05□□□□□ -0.64
CXCL12-201ENST00000343575 AMMECR1LQ6DCA0 310 aa11.05□□□□□ -0.64
CXCL12-201ENST00000343575 TCF24Q7RTU0 167 aa11.05□□□□□ -0.64
CXCL12-201ENST00000343575 hDV102S1A0JD36 115 aa11.04□□□□□ -0.64
CXCL12-201ENST00000343575 CSN1S1P47710 185 aa11.04□□□□□ -0.64
CXCL12-201ENST00000343575 PSG9Q00887 426 aa11.04□□□□□ -0.64
CXCL12-201ENST00000343575 PSMG4Q5JS54 123 aa11.04□□□□□ -0.64
CXCL12-201ENST00000343575 RNF182Q8N6D2 247 aa11.04□□□□□ -0.64
CXCL12-201ENST00000343575 IGKV3-7A0A075B6H7 116 aa11.04□□□□□ -0.64
CXCL12-201ENST00000343575 GAGE12BA1L429 117 aa11.04□□□□□ -0.64
CXCL12-201ENST00000343575 A6NDN8 102 aa11.04□□□□□ -0.64
CXCL12-201ENST00000343575 CBY3A6NI87 242 aa11.04□□□□□ -0.64
CXCL12-201ENST00000343575 TCRAP04437 139 aa11.04□□□□□ -0.64
CXCL12-201ENST00000343575 DCANP1Q8TF63 244 aa11.04□□□□□ -0.64
CXCL12-201ENST00000343575 PGLYRP4Q96LB8 373 aa11.04□□□□□ -0.64
CXCL12-201ENST00000343575 CSTL1Q9H114 145 aa11.04□□□□□ -0.64
CXCL12-201ENST00000343575 PEMTQ9UBM1 199 aa11.04□□□□□ -0.64
CXCL12-201ENST00000343575 OVOL1O14753 267 aa11.03□□□□□ -0.64
CXCL12-201ENST00000343575 RIGQ13278 110 aa11.03□□□□□ -0.64
CXCL12-201ENST00000343575 Q6AWC8 147 aa11.03□□□□□ -0.64
CXCL12-201ENST00000343575 GTSF1Q8WW33 167 aa11.03□□□□□ -0.64
CXCL12-201ENST00000343575 C20orf173Q96LM9 149 aa11.03□□□□□ -0.64
CXCL12-201ENST00000343575 SORL1Q92673 2214 aa11.02□□□□□ -0.64
CXCL12-201ENST00000343575 M0QZ24 198 aa11.02□□□□□ -0.64
CXCL12-201ENST00000343575 IGLV2-11P01706 119 aa11.02□□□□□ -0.64
CXCL12-201ENST00000343575 RPL11P62913 178 aaKnown RBP11.02□□□□□ -0.64
CXCL12-201ENST00000343575 SPATA3Q8NHX4 192 aa11.02□□□□□ -0.64
CXCL12-201ENST00000343575 AP1S3Q96PC3 154 aa11.02□□□□□ -0.64
CXCL12-201ENST00000343575 PRAC2D3DTV9 90 aa11.02□□□□□ -0.65
CXCL12-201ENST00000343575 H3BRM9 83 aa11.02□□□□□ -0.65
CXCL12-201ENST00000343575 SIVA1O15304 175 aa11.02□□□□□ -0.65
CXCL12-201ENST00000343575 TMEM97Q5BJF2 176 aa11.02□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 52.7 ms