RNA–Protein interactions for RNA: ENST00000343200.9

VCAN-203, Transcript of versican, humanhuman

TSL 1 (best) BASIC

Gene VCAN, Length 9,455 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-203ENST00000343200 FAM223AQ8IWN6 122 aa4.98□□□□□ -1.61
VCAN-203ENST00000343200 FAM110AQ9BQ89 295 aa4.98□□□□□ -1.61
VCAN-203ENST00000343200 FHL5Q5TD97 284 aa4.98□□□□□ -1.61
VCAN-203ENST00000343200 C1orf210Q8IVY1 113 aa4.98□□□□□ -1.61
VCAN-203ENST00000343200 FAM60AQ9NP50 221 aa4.98□□□□□ -1.61
VCAN-203ENST00000343200 NDUFB8O95169 186 aa4.98□□□□□ -1.61
VCAN-203ENST00000343200 LINC00479Q96M42 142 aa4.98□□□□□ -1.61
VCAN-203ENST00000343200 IGHV1-45A0A0A0MS14 117 aa4.97□□□□□ -1.61
VCAN-203ENST00000343200 USP17L23D6RBM5 183 aa4.97□□□□□ -1.61
VCAN-203ENST00000343200 COX7B2Q8TF08 81 aa4.97□□□□□ -1.61
VCAN-203ENST00000343200 C9JQL5 133 aa4.97□□□□□ -1.61
VCAN-203ENST00000343200 TM4SF4P48230 202 aa4.97□□□□□ -1.61
VCAN-203ENST00000343200 USMG5Q96IX5 58 aa4.97□□□□□ -1.61
VCAN-203ENST00000343200 SERP1Q9Y6X1 66 aa4.97□□□□□ -1.61
VCAN-203ENST00000343200 RBX1P62877 108 aa4.97□□□□□ -1.61
VCAN-203ENST00000343200 UNQ6494/PRO21346Q6UXR6 183 aa4.97□□□□□ -1.61
VCAN-203ENST00000343200 LINC01465Q8N7H1 131 aa4.97□□□□□ -1.61
VCAN-203ENST00000343200 ETV2O00321 342 aaPredicted RBP4.97□□□□□ -1.61
VCAN-203ENST00000343200 Q6ZS49 121 aa4.97□□□□□ -1.61
VCAN-203ENST00000343200 DYNAPQ8N1N2 210 aa4.97□□□□□ -1.61
VCAN-203ENST00000343200 RNF138Q8WVD3 245 aa4.97□□□□□ -1.61
VCAN-203ENST00000343200 C8orf49Q96NF6 230 aa4.97□□□□□ -1.61
VCAN-203ENST00000343200 SRXN1Q9BYN0 137 aa4.97□□□□□ -1.61
VCAN-203ENST00000343200 MST1LQ2TV78 715 aa4.97□□□□□ -1.61
VCAN-203ENST00000343200 SDIM1Q6ZPB5 146 aa4.97□□□□□ -1.61
VCAN-203ENST00000343200 SHANK2-AS3Q9BTD1 123 aa4.97□□□□□ -1.61
VCAN-203ENST00000343200 Q9H8V8 135 aa4.96□□□□□ -1.61
VCAN-203ENST00000343200 NOTCH1P46531 2555 aa4.96□□□□□ -1.61
VCAN-203ENST00000343200 ZNF134P52741 427 aa4.96□□□□□ -1.61
VCAN-203ENST00000343200 TDRG1Q3Y452 100 aa4.96□□□□□ -1.61
VCAN-203ENST00000343200 C11orf52Q96A22 123 aa4.96□□□□□ -1.61
VCAN-203ENST00000343200 IGKV4-1P06312 121 aa4.96□□□□□ -1.62
VCAN-203ENST00000343200 ATP5J2P56134 94 aa4.96□□□□□ -1.62
VCAN-203ENST00000343200 SLC25A45Q8N413 288 aa4.96□□□□□ -1.62
VCAN-203ENST00000343200 FXYD2P54710 66 aa4.96□□□□□ -1.62
VCAN-203ENST00000343200 ZCCHC24Q8N2G6 241 aaKnown RBP4.96□□□□□ -1.62
VCAN-203ENST00000343200 PRR7Q8TB68 274 aa4.96□□□□□ -1.62
VCAN-203ENST00000343200 BSPH1Q075Z2 132 aa4.96□□□□□ -1.62
VCAN-203ENST00000343200 SPACA3Q8IXA5 215 aa4.96□□□□□ -1.62
VCAN-203ENST00000343200 YPEL4Q96NS1 127 aa4.96□□□□□ -1.62
VCAN-203ENST00000343200 TMEM14CQ9P0S9 112 aa4.96□□□□□ -1.62
VCAN-203ENST00000343200 LINC00694P0DN24 101 aa4.96□□□□□ -1.62
VCAN-203ENST00000343200 PRR31Q5SQ13 230 aa4.96□□□□□ -1.62
VCAN-203ENST00000343200 LYPD6Q86Y78 171 aa4.96□□□□□ -1.62
VCAN-203ENST00000343200 DAZ1Q9NQZ3 744 aaKnown RBP4.96□□□□□ -1.62
VCAN-203ENST00000343200 SMIM9A6NGZ8 99 aa4.96□□□□□ -1.62
VCAN-203ENST00000343200 CCL21O00585 134 aa4.96□□□□□ -1.62
VCAN-203ENST00000343200 LTAP01374 205 aa4.96□□□□□ -1.62
VCAN-203ENST00000343200 ZNF747Q9BV97 191 aa4.96□□□□□ -1.62
VCAN-203ENST00000343200 TMEM213A2RRL7 107 aa4.95□□□□□ -1.62
VCAN-203ENST00000343200 C15orf62A8K5M9 175 aa4.95□□□□□ -1.62
VCAN-203ENST00000343200 IGLC6P0CF74 106 aa4.95□□□□□ -1.62
VCAN-203ENST00000343200 UBE2DNLQ8IWF7 75 aa4.95□□□□□ -1.62
VCAN-203ENST00000343200 PIFOQ8TCI5 191 aa4.95□□□□□ -1.62
VCAN-203ENST00000343200 TRBV6-6A0A0A6YYG2 114 aa4.95□□□□□ -1.62
VCAN-203ENST00000343200 TRAV26-2A0A0B4J265 109 aa4.95□□□□□ -1.62
VCAN-203ENST00000343200 TEX22C9J3V5 150 aa4.95□□□□□ -1.62
VCAN-203ENST00000343200 NDPQ00604 133 aa4.95□□□□□ -1.62
VCAN-203ENST00000343200 TCL1BO95988 128 aa4.95□□□□□ -1.62
VCAN-203ENST00000343200 NDUFA11Q86Y39 141 aa4.95□□□□□ -1.62
VCAN-203ENST00000343200 C20orf197Q8N268 126 aa4.95□□□□□ -1.62
VCAN-203ENST00000343200 WI2-2373I1.2A0A1W2PRP0 233 aa4.95□□□□□ -1.62
VCAN-203ENST00000343200 NTF4P34130 210 aa4.95□□□□□ -1.62
VCAN-203ENST00000343200 GFI1Q99684 422 aa4.95□□□□□ -1.62
VCAN-203ENST00000343200 IGF2RP11717 2491 aa4.95□□□□□ -1.62
VCAN-203ENST00000343200 NEU4Q8WWR8 484 aaPredicted RBP4.95□□□□□ -1.62
VCAN-203ENST00000343200 ZC2HC1AQ96GY0 325 aa4.95□□□□□ -1.62
VCAN-203ENST00000343200 MLST8Q9BVC4 326 aa4.95□□□□□ -1.62
VCAN-203ENST00000343200 PRO0628Q9UI54 55 aa4.95□□□□□ -1.62
VCAN-203ENST00000343200 WISP1O95388 367 aa4.95□□□□□ -1.62
VCAN-203ENST00000343200 IGKV1-5P01602 117 aa4.94□□□□□ -1.62
VCAN-203ENST00000343200 Q6P435 159 aa4.94□□□□□ -1.62
VCAN-203ENST00000343200 IGHV4-28A0A0C4DH34 117 aa4.94□□□□□ -1.62
VCAN-203ENST00000343200 SMIM26A0A096LP01 95 aa4.94□□□□□ -1.62
VCAN-203ENST00000343200 FOXE3Q13461 319 aa4.94□□□□□ -1.62
VCAN-203ENST00000343200 MDS2Q8NDY4 140 aa4.94□□□□□ -1.62
VCAN-203ENST00000343200 ATRQ13535 2644 aa4.94□□□□□ -1.62
VCAN-203ENST00000343200 FAM19A3Q7Z5A8 133 aa4.94□□□□□ -1.62
VCAN-203ENST00000343200 PAQR4Q8N4S7 273 aaPredicted RBP4.94□□□□□ -1.62
VCAN-203ENST00000343200 STAB2Q8WWQ8 2551 aa4.94□□□□□ -1.62
VCAN-203ENST00000343200 CD24P25063 80 aa4.94□□□□□ -1.62
VCAN-203ENST00000343200 RSPO2Q6UXX9 243 aaPredicted RBP4.94□□□□□ -1.62
VCAN-203ENST00000343200 LINC00114Q6XXX2 140 aa4.94□□□□□ -1.62
VCAN-203ENST00000343200 SND1-IT1Q9HBX3 110 aa4.94□□□□□ -1.62
VCAN-203ENST00000343200 COX7CP15954 63 aa4.94□□□□□ -1.62
VCAN-203ENST00000343200 C3orf36Q3SXR2 165 aa4.94□□□□□ -1.62
VCAN-203ENST00000343200 RBAKDNA6NC62 111 aa4.93□□□□□ -1.62
VCAN-203ENST00000343200 FGFBP3Q8TAT2 258 aa4.93□□□□□ -1.62
VCAN-203ENST00000343200 RMI2Q96E14 147 aa4.93□□□□□ -1.62
VCAN-203ENST00000343200 RNF5Q99942 180 aa4.93□□□□□ -1.62
VCAN-203ENST00000343200 CCDC179H3BU77 68 aa4.93□□□□□ -1.62
VCAN-203ENST00000343200 COLCA1Q6ZS62 124 aa4.93□□□□□ -1.62
VCAN-203ENST00000343200 METRNQ9UJH8 293 aa4.93□□□□□ -1.62
VCAN-203ENST00000343200 LYPD3O95274 346 aa4.93□□□□□ -1.62
VCAN-203ENST00000343200 OXLD1Q5BKU9 147 aa4.93□□□□□ -1.62
VCAN-203ENST00000343200 FAM19A5Q7Z5A7 132 aaPredicted RBP4.93□□□□□ -1.62
VCAN-203ENST00000343200 HIST2H2BCQ6DN03 193 aa4.93□□□□□ -1.62
VCAN-203ENST00000343200 HIST2H2BDQ6DRA6 164 aa4.93□□□□□ -1.62
VCAN-203ENST00000343200 DEFB104AQ8WTQ1 72 aa4.93□□□□□ -1.62
VCAN-203ENST00000343200 FOXS1O43638 330 aa4.93□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 55 ms