RNA–Protein interactions for RNA: ENST00000341307.6

RTN3-203, Transcript of reticulon 3, humanhuman

TSL 2 BASIC

Gene RTN3, Length 2,524 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-203ENST00000341307 TPPP3Q9BW30 176 aa9.23□□□□□ -0.93
RTN3-203ENST00000341307 NPFFO15130 113 aa9.23□□□□□ -0.93
RTN3-203ENST00000341307 DUSP14O95147 198 aaKnown RBP9.23□□□□□ -0.93
RTN3-203ENST00000341307 IGLV2-11P01706 119 aa9.23□□□□□ -0.93
RTN3-203ENST00000341307 SCGB1C2P0DMR2 95 aa9.23□□□□□ -0.93
RTN3-203ENST00000341307 LEPP41159 167 aa9.23□□□□□ -0.93
RTN3-203ENST00000341307 TEX36Q5VZQ5 186 aa9.23□□□□□ -0.93
RTN3-203ENST00000341307 LYPD2Q6UXB3 125 aa9.23□□□□□ -0.93
RTN3-203ENST00000341307 OR11H6Q8NGC7 330 aa9.23□□□□□ -0.93
RTN3-203ENST00000341307 FLYWCH2Q96CP2 140 aaKnown RBP9.23□□□□□ -0.93
RTN3-203ENST00000341307 DYNLRB1Q9NP97 96 aa9.23□□□□□ -0.93
RTN3-203ENST00000341307 MRPL35Q9NZE8 188 aaKnown RBP9.23□□□□□ -0.93
RTN3-203ENST00000341307 BAHCC1Q9P281 2608 aa9.22□□□□□ -0.93
RTN3-203ENST00000341307 FLNBO75369 2602 aaKnown RBP9.22□□□□□ -0.93
RTN3-203ENST00000341307 TNCP24821 2201 aa9.22□□□□□ -0.93
RTN3-203ENST00000341307 H3BTX0 84 aa9.22□□□□□ -0.93
RTN3-203ENST00000341307 J3KT08 172 aa9.22□□□□□ -0.93
RTN3-203ENST00000341307 ATP5IP56385 69 aaPredicted RBP9.22□□□□□ -0.93
RTN3-203ENST00000341307 CD69Q07108 199 aa9.22□□□□□ -0.93
RTN3-203ENST00000341307 ONECUT1Q9UBC0 465 aa9.22□□□□□ -0.93
RTN3-203ENST00000341307 LINC01546A6NGU7 62 aa9.22□□□□□ -0.93
RTN3-203ENST00000341307 LYNX1G3V0Z9 82 aa9.22□□□□□ -0.93
RTN3-203ENST00000341307 SLC25A20O43772 301 aa9.22□□□□□ -0.93
RTN3-203ENST00000341307 SAA2P0DJI9 122 aaPredicted RBP9.22□□□□□ -0.93
RTN3-203ENST00000341307 LYNX1P0DP58 116 aa9.22□□□□□ -0.93
RTN3-203ENST00000341307 CCL3L1P16619 93 aa9.22□□□□□ -0.93
RTN3-203ENST00000341307 ADORA2A-AS1P86434 159 aa9.22□□□□□ -0.93
RTN3-203ENST00000341307 LINC00305Q7Z4B0 112 aa9.22□□□□□ -0.93
RTN3-203ENST00000341307 Q8N1Y9 231 aa9.22□□□□□ -0.93
RTN3-203ENST00000341307 TMEM178BH3BS89 294 aa9.21□□□□□ -0.94
RTN3-203ENST00000341307 CRIP2P52943 208 aaPredicted RBP9.21□□□□□ -0.94
RTN3-203ENST00000341307 POU2AF1Q16633 256 aa9.21□□□□□ -0.94
RTN3-203ENST00000341307 LYRM7Q5U5X0 104 aa9.21□□□□□ -0.94
RTN3-203ENST00000341307 PRNTQ86SH4 94 aa9.21□□□□□ -0.94
RTN3-203ENST00000341307 S1PR3Q99500 378 aa9.21□□□□□ -0.94
RTN3-203ENST00000341307 ASCL2Q99929 193 aa9.21□□□□□ -0.94
RTN3-203ENST00000341307 DOPEY1Q5JWR5 2465 aa9.21□□□□□ -0.94
RTN3-203ENST00000341307 NDUFA7O95182 113 aa9.21□□□□□ -0.94
RTN3-203ENST00000341307 CD3EP07766 207 aa9.21□□□□□ -0.94
RTN3-203ENST00000341307 LGALS1P09382 135 aaKnown RBP9.21□□□□□ -0.94
RTN3-203ENST00000341307 CD7P09564 240 aa9.21□□□□□ -0.94
RTN3-203ENST00000341307 C2orf83Q53S99 150 aa9.21□□□□□ -0.94
RTN3-203ENST00000341307 NPIPB3Q92617 1050 aa9.21□□□□□ -0.94
RTN3-203ENST00000341307 NCBP2LA6PVI3 153 aaKnown RBP9.2□□□□□ -0.94
RTN3-203ENST00000341307 ATP5LO75964 103 aa9.2□□□□□ -0.94
RTN3-203ENST00000341307 RNASE2P10153 161 aaKnown RBP9.2□□□□□ -0.94
RTN3-203ENST00000341307 HERVK_113P63121 156 aa9.2□□□□□ -0.94
RTN3-203ENST00000341307 HIST2H2BCQ6DN03 193 aa9.2□□□□□ -0.94
RTN3-203ENST00000341307 Q9H3A6 140 aa9.2□□□□□ -0.94
RTN3-203ENST00000341307 CTSZQ9UBR2 303 aa9.2□□□□□ -0.94
RTN3-203ENST00000341307 KLK5Q9Y337 293 aaPredicted RBP9.2□□□□□ -0.94
RTN3-203ENST00000341307 A0A1B0GX51 115 aa9.2□□□□□ -0.94
RTN3-203ENST00000341307 CKS2P33552 79 aa9.2□□□□□ -0.94
RTN3-203ENST00000341307 MFAP4P55083 255 aa9.2□□□□□ -0.94
RTN3-203ENST00000341307 PRCDQ00LT1 54 aa9.2□□□□□ -0.94
RTN3-203ENST00000341307 PRADC1Q9BSG0 188 aa9.2□□□□□ -0.94
RTN3-203ENST00000341307 EDA2RQ9HAV5 297 aa9.2□□□□□ -0.94
RTN3-203ENST00000341307 ARFGEF3Q5TH69 2177 aa9.19□□□□□ -0.94
RTN3-203ENST00000341307 SETXQ7Z333 2677 aaKnown RBP9.19□□□□□ -0.94
RTN3-203ENST00000341307 F5H768 121 aa9.19□□□□□ -0.94
RTN3-203ENST00000341307 M0R2P5 195 aa9.19□□□□□ -0.94
RTN3-203ENST00000341307 LYZL1Q6UWQ5 148 aa9.19□□□□□ -0.94
RTN3-203ENST00000341307 NTN5Q8WTR8 489 aaPredicted RBP9.19□□□□□ -0.94
RTN3-203ENST00000341307 AAMDCQ9H7C9 122 aa9.19□□□□□ -0.94
RTN3-203ENST00000341307 IGKV1D-37A0A075B6S9 117 aa9.19□□□□□ -0.94
RTN3-203ENST00000341307 TRAV8-4A0A0B4J246 113 aa9.19□□□□□ -0.94
RTN3-203ENST00000341307 GAS8-AS1O95177 125 aa9.19□□□□□ -0.94
RTN3-203ENST00000341307 IGLC6P0CF74 106 aa9.19□□□□□ -0.94
RTN3-203ENST00000341307 CRIP1P50238 77 aa9.19□□□□□ -0.94
RTN3-203ENST00000341307 NDUFA11Q86Y39 141 aa9.19□□□□□ -0.94
RTN3-203ENST00000341307 PTPN13Q12923 2485 aa9.18□□□□□ -0.94
RTN3-203ENST00000341307 TRAV2A0A0B4J234 112 aa9.18□□□□□ -0.94
RTN3-203ENST00000341307 LY6HO94772 140 aa9.18□□□□□ -0.94
RTN3-203ENST00000341307 HOXB4P17483 251 aaPredicted RBP9.18□□□□□ -0.94
RTN3-203ENST00000341307 DLX1P56177 255 aa9.18□□□□□ -0.94
RTN3-203ENST00000341307 PRB3Q04118 309 aaPredicted RBP9.18□□□□□ -0.94
RTN3-203ENST00000341307 TMEM200BQ69YZ2 307 aa9.18□□□□□ -0.94
RTN3-203ENST00000341307 FBN2P35556 2912 aa9.18□□□□□ -0.94
RTN3-203ENST00000341307 NDUFA3O95167 84 aa9.17□□□□□ -0.94
RTN3-203ENST00000341307 TMEM155Q4W5P6 130 aa9.17□□□□□ -0.94
RTN3-203ENST00000341307 HRNRQ86YZ3 2850 aaPredicted RBP9.17□□□□□ -0.94
RTN3-203ENST00000341307 GP9P14770 177 aa9.17□□□□□ -0.94
RTN3-203ENST00000341307 SRSF9Q13242 221 aaKnown RBP eCLIP9.17□□□□□ -0.94
RTN3-203ENST00000341307 ZNF672Q499Z4 452 aaPredicted RBP9.17□□□□□ -0.94
RTN3-203ENST00000341307 C9orf153Q5TBE3 101 aa9.17□□□□□ -0.94
RTN3-203ENST00000341307 GOLT1AQ6ZVE7 132 aa9.17□□□□□ -0.94
RTN3-203ENST00000341307 OR13C6PQ8NH95 151 aa9.17□□□□□ -0.94
RTN3-203ENST00000341307 RPUSD1Q9UJJ7 312 aaKnown RBP9.17□□□□□ -0.94
RTN3-203ENST00000341307 TIMM23O14925 209 aa9.16□□□□□ -0.94
RTN3-203ENST00000341307 IGKV1-16P04430 117 aa9.16□□□□□ -0.94
RTN3-203ENST00000341307 HES1Q14469 280 aa9.16□□□□□ -0.94
RTN3-203ENST00000341307 TRPT1Q86TN4 253 aaKnown RBP9.16□□□□□ -0.94
RTN3-203ENST00000341307 TEX49A0A1B0GTD5 131 aa9.16□□□□□ -0.94
RTN3-203ENST00000341307 NDUFB3O43676 98 aa9.16□□□□□ -0.94
RTN3-203ENST00000341307 IGHV3-48P01763 117 aa9.16□□□□□ -0.94
RTN3-203ENST00000341307 C3orf22Q8N5N4 141 aa9.16□□□□□ -0.94
RTN3-203ENST00000341307 PLEKHB2Q96CS7 222 aa9.16□□□□□ -0.94
RTN3-203ENST00000341307 MAP1AP78559 2803 aaPredicted RBP9.16□□□□□ -0.94
RTN3-203ENST00000341307 ASH1LQ9NR48 2969 aaKnown RBP9.16□□□□□ -0.94
RTN3-203ENST00000341307 ABCA4P78363 2273 aa9.16□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 2389.2 ms