RNA–Protein interactions for RNA: ENST00000340477.9

SYNE4-202, Transcript of spectrin repeat containing nuclear envelope family member 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SYNE4, Length 1,004 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE4-202ENST00000340477 TDRG1Q3Y452 100 aa13.54□□□□□ -0.24
SYNE4-202ENST00000340477 Q86TA4 180 aa13.54□□□□□ -0.24
SYNE4-202ENST00000340477 UBE2DNLQ8IWF7 75 aa13.54□□□□□ -0.24
SYNE4-202ENST00000340477 FMC1Q96HJ9 113 aa13.54□□□□□ -0.24
SYNE4-202ENST00000340477 C8orf49Q96NF6 230 aa13.54□□□□□ -0.24
SYNE4-202ENST00000340477 RYR2Q92736 4967 aa13.53□□□□□ -0.24
SYNE4-202ENST00000340477 TRAV34A0A0B4J273 112 aa13.53□□□□□ -0.24
SYNE4-202ENST00000340477 PFN1P07737 140 aaKnown RBP13.53□□□□□ -0.24
SYNE4-202ENST00000340477 AKR1C3P42330 323 aa13.53□□□□□ -0.24
SYNE4-202ENST00000340477 OR5I1Q13606 314 aa13.53□□□□□ -0.24
SYNE4-202ENST00000340477 SPXQ9BT56 116 aa13.53□□□□□ -0.24
SYNE4-202ENST00000340477 SULT1A2P50226 295 aa13.52□□□□□ -0.25
SYNE4-202ENST00000340477 C9orf62Q8N4C0 152 aa13.52□□□□□ -0.25
SYNE4-202ENST00000340477 LINC00479Q96M42 142 aa13.52□□□□□ -0.25
SYNE4-202ENST00000340477 MANBALQ9NQG1 85 aa13.52□□□□□ -0.25
SYNE4-202ENST00000340477 MRPL16Q9NX20 251 aaKnown RBP13.52□□□□□ -0.25
SYNE4-202ENST00000340477 C18orf15Q96N68 181 aa13.51□□□□□ -0.25
SYNE4-202ENST00000340477 MDFICQ9P1T7 246 aa13.51□□□□□ -0.25
SYNE4-202ENST00000340477 ZFP30Q9Y2G7 519 aa13.51□□□□□ -0.25
SYNE4-202ENST00000340477 NUDT3O95989 172 aa13.5□□□□□ -0.25
SYNE4-202ENST00000340477 IFNA1P01562 189 aa13.5□□□□□ -0.25
SYNE4-202ENST00000340477 TRAV1-1A0A0B4J248 108 aa13.49□□□□□ -0.25
SYNE4-202ENST00000340477 TYMSP04818 313 aa13.49□□□□□ -0.25
SYNE4-202ENST00000340477 S100A9P06702 114 aaKnown RBP13.49□□□□□ -0.25
SYNE4-202ENST00000340477 POM121L12Q8N7R1 296 aa13.49□□□□□ -0.25
SYNE4-202ENST00000340477 GNG13Q9P2W3 67 aa13.49□□□□□ -0.25
SYNE4-202ENST00000340477 TRAV26-1A0A087WT03 109 aa13.48□□□□□ -0.25
SYNE4-202ENST00000340477 IGHV3-16A0A0C4DH30 117 aa13.48□□□□□ -0.25
SYNE4-202ENST00000340477 A0A1B0GVG6 124 aa13.48□□□□□ -0.25
SYNE4-202ENST00000340477 ZNF80P51504 273 aaPredicted RBP13.48□□□□□ -0.25
SYNE4-202ENST00000340477 TRBV6-1A0A0K0K1D8 114 aa13.47□□□□□ -0.25
SYNE4-202ENST00000340477 FABP5P3A8MUU1 101 aa13.47□□□□□ -0.25
SYNE4-202ENST00000340477 M0R2P5 195 aa13.47□□□□□ -0.25
SYNE4-202ENST00000340477 GNRH2O43555 120 aa13.47□□□□□ -0.25
SYNE4-202ENST00000340477 TXNDC17Q9BRA2 123 aa13.47□□□□□ -0.25
SYNE4-202ENST00000340477 A0A0J9YY99 117 aa13.46□□□□□ -0.25
SYNE4-202ENST00000340477 HOXA5P20719 270 aa13.46□□□□□ -0.25
SYNE4-202ENST00000340477 SLAQ13239 276 aa13.46□□□□□ -0.25
SYNE4-202ENST00000340477 RNF212Q495C1 297 aa13.46□□□□□ -0.25
SYNE4-202ENST00000340477 SCO2A0A1W2PP80 73 aa13.45□□□□□ -0.26
SYNE4-202ENST00000340477 H3BNG1 76 aa13.45□□□□□ -0.26
SYNE4-202ENST00000340477 LTAP01374 205 aa13.45□□□□□ -0.26
SYNE4-202ENST00000340477 IGHV3-53P01767 116 aa13.45□□□□□ -0.26
SYNE4-202ENST00000340477 S100A4P26447 101 aaKnown RBP13.45□□□□□ -0.26
SYNE4-202ENST00000340477 FAM162BQ5T6X4 162 aa13.45□□□□□ -0.26
SYNE4-202ENST00000340477 RASL10AQ92737 203 aa13.45□□□□□ -0.26
SYNE4-202ENST00000340477 MUC4Q99102 2169 aa13.44□□□□□ -0.26
SYNE4-202ENST00000340477 ORM1P02763 201 aa13.44□□□□□ -0.26
SYNE4-202ENST00000340477 CCL18P55774 89 aa13.44□□□□□ -0.26
SYNE4-202ENST00000340477 FAM3BP58499 235 aaPredicted RBP13.44□□□□□ -0.26
SYNE4-202ENST00000340477 ZC2HC1AQ96GY0 325 aa13.44□□□□□ -0.26
SYNE4-202ENST00000340477 TRGV4A0A0C4DH28 118 aa13.43□□□□□ -0.26
SYNE4-202ENST00000340477 TAGLN2P37802 199 aaKnown RBP13.43□□□□□ -0.26
SYNE4-202ENST00000340477 ASIPP42127 132 aa13.43□□□□□ -0.26
SYNE4-202ENST00000340477 CCL20P78556 96 aa13.43□□□□□ -0.26
SYNE4-202ENST00000340477 COX8CQ7Z4L0 72 aa13.43□□□□□ -0.26
SYNE4-202ENST00000340477 C11orf21Q9P2W6 132 aa13.43□□□□□ -0.26
SYNE4-202ENST00000340477 HYDINQ4G0P3 5121 aa13.43□□□□□ -0.26
SYNE4-202ENST00000340477 TRAV4A0A0B4J268 109 aa13.42□□□□□ -0.26
SYNE4-202ENST00000340477 B4DEV8 164 aa13.42□□□□□ -0.26
SYNE4-202ENST00000340477 ALKAL2Q6UX46 152 aa13.42□□□□□ -0.26
SYNE4-202ENST00000340477 OR4C5Q8NGB2 326 aa13.42□□□□□ -0.26
SYNE4-202ENST00000340477 PRO0255Q9UI72 69 aa13.42□□□□□ -0.26
SYNE4-202ENST00000340477 PAX4O43316 350 aa13.41□□□□□ -0.26
SYNE4-202ENST00000340477 PDE6DO43924 150 aa13.41□□□□□ -0.26
SYNE4-202ENST00000340477 SH2D1AO60880 128 aa13.41□□□□□ -0.26
SYNE4-202ENST00000340477 NKX2-5P52952 324 aaPredicted RBP13.41□□□□□ -0.26
SYNE4-202ENST00000340477 BLOC1S1P78537 153 aa13.41□□□□□ -0.26
SYNE4-202ENST00000340477 MEF2BQ02080 365 aaPredicted RBP13.41□□□□□ -0.26
SYNE4-202ENST00000340477 BAGE2Q86Y30 109 aa13.41□□□□□ -0.26
SYNE4-202ENST00000340477 C9JCJ5 164 aa13.4□□□□□ -0.26
SYNE4-202ENST00000340477 BCL2P10415 239 aa13.4□□□□□ -0.26
SYNE4-202ENST00000340477 ZNF876PQ49A33 203 aa13.4□□□□□ -0.26
SYNE4-202ENST00000340477 NHLRC2Q8NBF2 726 aa13.4□□□□□ -0.26
SYNE4-202ENST00000340477 C9orf85Q96MD7 179 aa13.4□□□□□ -0.26
SYNE4-202ENST00000340477 HHLA3Q9XRX5 114 aa13.4□□□□□ -0.26
SYNE4-202ENST00000340477 ICOSQ9Y6W8 199 aa13.4□□□□□ -0.26
SYNE4-202ENST00000340477 M0R036 132 aa13.39□□□□□ -0.27
SYNE4-202ENST00000340477 RPL35P42766 123 aaKnown RBP13.39□□□□□ -0.27
SYNE4-202ENST00000340477 ZNF674Q2M3X9 581 aa13.39□□□□□ -0.27
SYNE4-202ENST00000340477 PCNPQ8WW12 178 aaKnown RBP13.39□□□□□ -0.27
SYNE4-202ENST00000340477 C11orf52Q96A22 123 aa13.39□□□□□ -0.27
SYNE4-202ENST00000340477 VPS13DQ5THJ4 4388 aa13.39□□□□□ -0.27
SYNE4-202ENST00000340477 KMT2AQ03164 3969 aa13.39□□□□□ -0.27
SYNE4-202ENST00000340477 IGKV3D-20A0A0C4DH25 116 aa13.38□□□□□ -0.27
SYNE4-202ENST00000340477 SFTA3P0C7M3 94 aa13.38□□□□□ -0.27
SYNE4-202ENST00000340477 ZNF479Q96JC4 524 aa13.38□□□□□ -0.27
SYNE4-202ENST00000340477 VAX2Q9UIW0 290 aa13.38□□□□□ -0.27
SYNE4-202ENST00000340477 KRBOX1C9JBD0 128 aa13.37□□□□□ -0.27
SYNE4-202ENST00000340477 CIDEAO60543 219 aa13.37□□□□□ -0.27
SYNE4-202ENST00000340477 CRYBA4P53673 196 aa13.37□□□□□ -0.27
SYNE4-202ENST00000340477 FHL2Q14192 279 aa13.37□□□□□ -0.27
SYNE4-202ENST00000340477 SYT8Q8NBV8 401 aa13.37□□□□□ -0.27
SYNE4-202ENST00000340477 VSIG2Q96IQ7 327 aa13.37□□□□□ -0.27
SYNE4-202ENST00000340477 H3BVH4 76 aa13.36□□□□□ -0.27
SYNE4-202ENST00000340477 RNASE3P12724 160 aaKnown RBP13.36□□□□□ -0.27
SYNE4-202ENST00000340477 CRIP1P50238 77 aa13.36□□□□□ -0.27
SYNE4-202ENST00000340477 LINC01559Q495D7 138 aa13.36□□□□□ -0.27
SYNE4-202ENST00000340477 PRR27Q6MZM9 219 aa13.36□□□□□ -0.27
SYNE4-202ENST00000340477 PTH2Q96A98 100 aa13.36□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 81.6 ms