RNA–Protein interactions for RNA: ENST00000338602.6

SLC28A1-202, Transcript of solute carrier family 28 member 1, humanhuman

TSL 1 (best) BASIC

Gene SLC28A1, Length 1,360 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC28A1-202ENST00000338602 CST9LP1Q5W188 147 aa8.01□□□□□ -1.13
SLC28A1-202ENST00000338602 TMEM88Q6PEY1 159 aa8.01□□□□□ -1.13
SLC28A1-202ENST00000338602 PRNTQ86SH4 94 aa8.01□□□□□ -1.13
SLC28A1-202ENST00000338602 MBD3L1Q8WWY6 194 aa8.01□□□□□ -1.13
SLC28A1-202ENST00000338602 KCNS1Q96KK3 526 aa8.01□□□□□ -1.13
SLC28A1-202ENST00000338602 NAGKQ9UJ70 344 aa8.01□□□□□ -1.13
SLC28A1-202ENST00000338602 ARL2-SNX15V9GYD0 113 aa8.01□□□□□ -1.13
SLC28A1-202ENST00000338602 TRGV1A0A0A0MS02 117 aa8□□□□□ -1.13
SLC28A1-202ENST00000338602 CCL20P78556 96 aa8□□□□□ -1.13
SLC28A1-202ENST00000338602 LGALS9BQ3B8N2 356 aa8□□□□□ -1.13
SLC28A1-202ENST00000338602 SMUG1Q53HV7 270 aa8□□□□□ -1.13
SLC28A1-202ENST00000338602 LINC00612Q8N6U2 182 aa8□□□□□ -1.13
SLC28A1-202ENST00000338602 C11orf72Q8NBR9 251 aa8□□□□□ -1.13
SLC28A1-202ENST00000338602 LYPD6BQ8NI32 183 aa8□□□□□ -1.13
SLC28A1-202ENST00000338602 SGK494Q96LW2 274 aa8□□□□□ -1.13
SLC28A1-202ENST00000338602 SPINK4O60575 86 aa7.99□□□□□ -1.13
SLC28A1-202ENST00000338602 UBE2G1P62253 170 aa7.99□□□□□ -1.13
SLC28A1-202ENST00000338602 OR5I1Q13606 314 aa7.99□□□□□ -1.13
SLC28A1-202ENST00000338602 TMEM183BQ1AE95 376 aa7.99□□□□□ -1.13
SLC28A1-202ENST00000338602 Q6ZTI0 123 aa7.99□□□□□ -1.13
SLC28A1-202ENST00000338602 UBE2DNLQ8IWF7 75 aa7.99□□□□□ -1.13
SLC28A1-202ENST00000338602 TMEM183AQ8IXX5 376 aa7.99□□□□□ -1.13
SLC28A1-202ENST00000338602 TVP23CQ96ET8 276 aa7.99□□□□□ -1.13
SLC28A1-202ENST00000338602 SPXQ9BT56 116 aa7.99□□□□□ -1.13
SLC28A1-202ENST00000338602 SDF2L1Q9HCN8 221 aa7.99□□□□□ -1.13
SLC28A1-202ENST00000338602 TP53TG3Q9ULZ0 132 aa7.99□□□□□ -1.13
SLC28A1-202ENST00000338602 KLF12Q9Y4X4 402 aa7.99□□□□□ -1.13
SLC28A1-202ENST00000338602 GCGP01275 180 aa7.98□□□□□ -1.13
SLC28A1-202ENST00000338602 TDRG1Q3Y452 100 aa7.98□□□□□ -1.13
SLC28A1-202ENST00000338602 Q6ZQT7 251 aa7.98□□□□□ -1.13
SLC28A1-202ENST00000338602 FMC1Q96HJ9 113 aa7.98□□□□□ -1.13
SLC28A1-202ENST00000338602 C18orf15Q96N68 181 aa7.98□□□□□ -1.13
SLC28A1-202ENST00000338602 ZFP30Q9Y2G7 519 aa7.98□□□□□ -1.13
SLC28A1-202ENST00000338602 TRAV1-1A0A0B4J248 108 aa7.97□□□□□ -1.13
SLC28A1-202ENST00000338602 TRAV34A0A0B4J273 112 aa7.97□□□□□ -1.13
SLC28A1-202ENST00000338602 PAGE4O60829 102 aa7.97□□□□□ -1.13
SLC28A1-202ENST00000338602 NUDT3O95989 172 aa7.97□□□□□ -1.13
SLC28A1-202ENST00000338602 IGLV2-11P01706 119 aa7.97□□□□□ -1.13
SLC28A1-202ENST00000338602 S100A9P06702 114 aaKnown RBP7.97□□□□□ -1.13
SLC28A1-202ENST00000338602 PFN1P07737 140 aaKnown RBP7.97□□□□□ -1.13
SLC28A1-202ENST00000338602 SRSF3P84103 164 aaKnown RBP7.97□□□□□ -1.13
SLC28A1-202ENST00000338602 POM121L12Q8N7R1 296 aa7.97□□□□□ -1.13
SLC28A1-202ENST00000338602 RAB19A4D1S5 217 aa7.97□□□□□ -1.13
SLC28A1-202ENST00000338602 FABP5P3A8MUU1 101 aa7.97□□□□□ -1.13
SLC28A1-202ENST00000338602 AKR1C3P42330 323 aa7.97□□□□□ -1.13
SLC28A1-202ENST00000338602 SLAQ13239 276 aa7.97□□□□□ -1.13
SLC28A1-202ENST00000338602 RNF212Q495C1 297 aa7.97□□□□□ -1.13
SLC28A1-202ENST00000338602 LINC00479Q96M42 142 aa7.97□□□□□ -1.13
SLC28A1-202ENST00000338602 C8orf49Q96NF6 230 aa7.97□□□□□ -1.13
SLC28A1-202ENST00000338602 MANBALQ9NQG1 85 aa7.97□□□□□ -1.13
SLC28A1-202ENST00000338602 MRPL16Q9NX20 251 aaKnown RBP7.97□□□□□ -1.13
SLC28A1-202ENST00000338602 MDFICQ9P1T7 246 aa7.97□□□□□ -1.13
SLC28A1-202ENST00000338602 TRAV26-1A0A087WT03 109 aa7.96□□□□□ -1.14
SLC28A1-202ENST00000338602 M0R2P5 195 aa7.96□□□□□ -1.14
SLC28A1-202ENST00000338602 GNRH2O43555 120 aa7.96□□□□□ -1.14
SLC28A1-202ENST00000338602 IFNA1P01562 189 aa7.96□□□□□ -1.14
SLC28A1-202ENST00000338602 Q86TA4 180 aa7.96□□□□□ -1.14
SLC28A1-202ENST00000338602 VPS13DQ5THJ4 4388 aa7.96□□□□□ -1.14
SLC28A1-202ENST00000338602 FRAS1Q86XX4 4008 aa7.95□□□□□ -1.14
SLC28A1-202ENST00000338602 IGHV3-16A0A0C4DH30 117 aa7.95□□□□□ -1.14
SLC28A1-202ENST00000338602 TRBV6-1A0A0K0K1D8 114 aa7.95□□□□□ -1.14
SLC28A1-202ENST00000338602 H3BNG1 76 aa7.95□□□□□ -1.14
SLC28A1-202ENST00000338602 TYMSP04818 313 aa7.95□□□□□ -1.14
SLC28A1-202ENST00000338602 ZNF80P51504 273 aaPredicted RBP7.95□□□□□ -1.14
SLC28A1-202ENST00000338602 CCL18P55774 89 aa7.95□□□□□ -1.14
SLC28A1-202ENST00000338602 FAM3BP58499 235 aaPredicted RBP7.95□□□□□ -1.14
SLC28A1-202ENST00000338602 RASL10AQ92737 203 aa7.95□□□□□ -1.14
SLC28A1-202ENST00000338602 FAM210AQ96ND0 272 aa7.95□□□□□ -1.14
SLC28A1-202ENST00000338602 TXNDC17Q9BRA2 123 aa7.95□□□□□ -1.14
SLC28A1-202ENST00000338602 GNG13Q9P2W3 67 aa7.95□□□□□ -1.14
SLC28A1-202ENST00000338602 A0A0J9YY99 117 aa7.94□□□□□ -1.14
SLC28A1-202ENST00000338602 RBFOX3A6NFN3 312 aa7.94□□□□□ -1.14
SLC28A1-202ENST00000338602 C9JQL5 133 aa7.94□□□□□ -1.14
SLC28A1-202ENST00000338602 HOXA5P20719 270 aa7.94□□□□□ -1.14
SLC28A1-202ENST00000338602 S100A1P23297 94 aa7.94□□□□□ -1.14
SLC28A1-202ENST00000338602 S100A4P26447 101 aaKnown RBP7.94□□□□□ -1.14
SLC28A1-202ENST00000338602 TOR2AQ5JU69 321 aa7.94□□□□□ -1.14
SLC28A1-202ENST00000338602 UQCC3Q6UW78 93 aa7.94□□□□□ -1.14
SLC28A1-202ENST00000338602 EIF5A2Q9GZV4 153 aaKnown RBP7.94□□□□□ -1.14
SLC28A1-202ENST00000338602 TRGV4A0A0C4DH28 118 aa7.93□□□□□ -1.14
SLC28A1-202ENST00000338602 IGHV3-53P01767 116 aa7.93□□□□□ -1.14
SLC28A1-202ENST00000338602 ORM1P02763 201 aa7.93□□□□□ -1.14
SLC28A1-202ENST00000338602 PEA15Q15121 130 aa7.93□□□□□ -1.14
SLC28A1-202ENST00000338602 FAM162BQ5T6X4 162 aa7.93□□□□□ -1.14
SLC28A1-202ENST00000338602 PRO0255Q9UI72 69 aa7.93□□□□□ -1.14
SLC28A1-202ENST00000338602 TRAV4A0A0B4J268 109 aa7.92□□□□□ -1.14
SLC28A1-202ENST00000338602 SCO2A0A1W2PP80 73 aa7.92□□□□□ -1.14
SLC28A1-202ENST00000338602 B4DEV8 164 aa7.92□□□□□ -1.14
SLC28A1-202ENST00000338602 PAX4O43316 350 aa7.92□□□□□ -1.14
SLC28A1-202ENST00000338602 LTAP01374 205 aa7.92□□□□□ -1.14
SLC28A1-202ENST00000338602 TAGLN2P37802 199 aaKnown RBP7.92□□□□□ -1.14
SLC28A1-202ENST00000338602 ZNF876PQ49A33 203 aa7.92□□□□□ -1.14
SLC28A1-202ENST00000338602 ZNF506Q5JVG8 444 aa7.92□□□□□ -1.14
SLC28A1-202ENST00000338602 COX8CQ7Z4L0 72 aa7.92□□□□□ -1.14
SLC28A1-202ENST00000338602 OR4C5Q8NGB2 326 aa7.92□□□□□ -1.14
SLC28A1-202ENST00000338602 HHLA3Q9XRX5 114 aa7.92□□□□□ -1.14
SLC28A1-202ENST00000338602 DNAH6Q9C0G6 4158 aa7.91□□□□□ -1.14
SLC28A1-202ENST00000338602 KMT2AQ03164 3969 aa7.91□□□□□ -1.14
SLC28A1-202ENST00000338602 TMEM218A2RU14 115 aa7.91□□□□□ -1.14
SLC28A1-202ENST00000338602 C9JCJ5 164 aa7.91□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 58.2 ms