RNA–Protein interactions for RNA: ENST00000338368.7

PRKDC-202, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PRKDC, Length 12,784 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-202ENST00000338368 NPYP01303 97 aa4.88□□□□□ -1.63
PRKDC-202ENST00000338368 VPREB3Q9UKI3 123 aa4.88□□□□□ -1.63
PRKDC-202ENST00000338368 ATP6V0BQ99437 205 aa4.88□□□□□ -1.63
PRKDC-202ENST00000338368 LENEPQ9Y5L5 61 aa4.88□□□□□ -1.63
PRKDC-202ENST00000338368 RBAKDNA6NC62 111 aa4.88□□□□□ -1.63
PRKDC-202ENST00000338368 VCYO14598 125 aa4.88□□□□□ -1.63
PRKDC-202ENST00000338368 UBE2DNLQ8IWF7 75 aa4.88□□□□□ -1.63
PRKDC-202ENST00000338368 CSTL1Q9H114 145 aa4.88□□□□□ -1.63
PRKDC-202ENST00000338368 C1orf159Q96HA4 380 aa4.88□□□□□ -1.63
PRKDC-202ENST00000338368 EBI3Q14213 229 aa4.88□□□□□ -1.63
PRKDC-202ENST00000338368 C16orf54Q6UWD8 224 aa4.88□□□□□ -1.63
PRKDC-202ENST00000338368 PRADC1Q9BSG0 188 aa4.88□□□□□ -1.63
PRKDC-202ENST00000338368 A0A087WWL8 130 aa4.88□□□□□ -1.63
PRKDC-202ENST00000338368 OR9G4Q8NGQ1 327 aa4.88□□□□□ -1.63
PRKDC-202ENST00000338368 APOMO95445 188 aa4.88□□□□□ -1.63
PRKDC-202ENST00000338368 IGLL1P15814 213 aa4.88□□□□□ -1.63
PRKDC-202ENST00000338368 RNF152Q8N8N0 203 aa4.88□□□□□ -1.63
PRKDC-202ENST00000338368 TTC32Q5I0X7 151 aa4.87□□□□□ -1.63
PRKDC-202ENST00000338368 EMP1P54849 157 aa4.87□□□□□ -1.63
PRKDC-202ENST00000338368 Q8N8P6 123 aa4.87□□□□□ -1.63
PRKDC-202ENST00000338368 MLST8Q9BVC4 326 aa4.87□□□□□ -1.63
PRKDC-202ENST00000338368 LGALS1P09382 135 aaKnown RBP4.87□□□□□ -1.63
PRKDC-202ENST00000338368 C2orf66Q6UXQ4 117 aa4.87□□□□□ -1.63
PRKDC-202ENST00000338368 A6NDX4 124 aa4.87□□□□□ -1.63
PRKDC-202ENST00000338368 H3BUT2 72 aa4.87□□□□□ -1.63
PRKDC-202ENST00000338368 UBE2E2Q96LR5 201 aa4.87□□□□□ -1.63
PRKDC-202ENST00000338368 OVOL2Q9BRP0 275 aa4.87□□□□□ -1.63
PRKDC-202ENST00000338368 XCL2Q9UBD3 114 aa4.87□□□□□ -1.63
PRKDC-202ENST00000338368 IGHV3-73A0A0B4J1V6 119 aa4.87□□□□□ -1.63
PRKDC-202ENST00000338368 LINC01548A6NM66 108 aa4.87□□□□□ -1.63
PRKDC-202ENST00000338368 ZC2HC1BQ5TFG8 222 aa4.87□□□□□ -1.63
PRKDC-202ENST00000338368 TRAV26-2A0A0B4J265 109 aa4.87□□□□□ -1.63
PRKDC-202ENST00000338368 KNCNA6PVL3 124 aa4.87□□□□□ -1.63
PRKDC-202ENST00000338368 IGLV2-8P01709 118 aa4.87□□□□□ -1.63
PRKDC-202ENST00000338368 TMEM95Q3KNT9 176 aa4.87□□□□□ -1.63
PRKDC-202ENST00000338368 YPEL4Q96NS1 127 aa4.87□□□□□ -1.63
PRKDC-202ENST00000338368 IGKV3OR2-268A0A0C4DH90 116 aa4.87□□□□□ -1.63
PRKDC-202ENST00000338368 ZNF415Q09FC8 603 aa4.87□□□□□ -1.63
PRKDC-202ENST00000338368 CD300EQ496F6 205 aaPredicted RBP4.87□□□□□ -1.63
PRKDC-202ENST00000338368 H7C2G1 150 aa4.87□□□□□ -1.63
PRKDC-202ENST00000338368 SUMO2P61956 95 aaKnown RBP4.87□□□□□ -1.63
PRKDC-202ENST00000338368 STPG4Q8N801 248 aa4.87□□□□□ -1.63
PRKDC-202ENST00000338368 GTSF1Q8WW33 167 aa4.86□□□□□ -1.63
PRKDC-202ENST00000338368 ZNF48Q96MX3 618 aaPredicted RBP4.86□□□□□ -1.63
PRKDC-202ENST00000338368 SIGLEC8Q9NYZ4 499 aa4.86□□□□□ -1.63
PRKDC-202ENST00000338368 HSD52Q0P140 79 aa4.86□□□□□ -1.63
PRKDC-202ENST00000338368 MRPL53Q96EL3 112 aaKnown RBP4.86□□□□□ -1.63
PRKDC-202ENST00000338368 NHP2Q9NX24 153 aaKnown RBP4.86□□□□□ -1.63
PRKDC-202ENST00000338368 KLK9Q9UKQ9 250 aa4.86□□□□□ -1.63
PRKDC-202ENST00000338368 CDKN1BP46527 198 aa4.86□□□□□ -1.63
PRKDC-202ENST00000338368 FOXE3Q13461 319 aa4.86□□□□□ -1.63
PRKDC-202ENST00000338368 KLF5Q13887 457 aaPredicted RBP4.86□□□□□ -1.63
PRKDC-202ENST00000338368 MEGF9Q9H1U4 602 aa4.86□□□□□ -1.63
PRKDC-202ENST00000338368 TLN1Q9Y490 2541 aaKnown RBP4.86□□□□□ -1.63
PRKDC-202ENST00000338368 MSRB1Q9NZV6 116 aa4.86□□□□□ -1.63
PRKDC-202ENST00000338368 LGALS9BQ3B8N2 356 aa4.86□□□□□ -1.63
PRKDC-202ENST00000338368 LGALS9CQ6DKI2 356 aa4.86□□□□□ -1.63
PRKDC-202ENST00000338368 IGHV1OR15-1A0A075B7D0 117 aa4.86□□□□□ -1.63
PRKDC-202ENST00000338368 TLN2Q9Y4G6 2542 aa4.86□□□□□ -1.63
PRKDC-202ENST00000338368 TRGV1A0A0A0MS02 117 aa4.86□□□□□ -1.63
PRKDC-202ENST00000338368 GNRH2O43555 120 aa4.86□□□□□ -1.63
PRKDC-202ENST00000338368 SPRY2O43597 315 aa4.86□□□□□ -1.63
PRKDC-202ENST00000338368 LINC00322Q6ZN03 302 aaPredicted RBP4.86□□□□□ -1.63
PRKDC-202ENST00000338368 ZNF747Q9BV97 191 aa4.86□□□□□ -1.63
PRKDC-202ENST00000338368 C19orf71A6NCJ1 209 aa4.86□□□□□ -1.63
PRKDC-202ENST00000338368 TRAV12-2A0A075B6T6 113 aa4.86□□□□□ -1.63
PRKDC-202ENST00000338368 MALP21145 153 aa4.86□□□□□ -1.63
PRKDC-202ENST00000338368 HOXD3P31249 432 aaPredicted RBP4.86□□□□□ -1.63
PRKDC-202ENST00000338368 INSL3P51460 131 aa4.86□□□□□ -1.63
PRKDC-202ENST00000338368 MEIG1Q5JSS6 88 aa4.86□□□□□ -1.63
PRKDC-202ENST00000338368 PAX2Q02962 417 aa4.86□□□□□ -1.63
PRKDC-202ENST00000338368 SNHG12Q9BXW3 62 aa4.86□□□□□ -1.63
PRKDC-202ENST00000338368 ZNF815PA8K554 130 aa4.85□□□□□ -1.63
PRKDC-202ENST00000338368 TEX43Q6ZNM6 134 aa4.85□□□□□ -1.63
PRKDC-202ENST00000338368 IGHV3-53P01767 116 aa4.85□□□□□ -1.63
PRKDC-202ENST00000338368 RPL36AP83881 106 aaKnown RBP4.85□□□□□ -1.63
PRKDC-202ENST00000338368 RPL36ALQ969Q0 106 aaKnown RBP4.85□□□□□ -1.63
PRKDC-202ENST00000338368 RBMY1BA6NDE4 496 aaKnown RBP4.85□□□□□ -1.63
PRKDC-202ENST00000338368 RBMY1EA6NEQ0 496 aaKnown RBP4.85□□□□□ -1.63
PRKDC-202ENST00000338368 SDHAF1A6NFY7 115 aa4.85□□□□□ -1.63
PRKDC-202ENST00000338368 RBMY1DP0C7P1 496 aaKnown RBP4.85□□□□□ -1.63
PRKDC-202ENST00000338368 RBMY1A1P0DJD3 496 aaKnown RBP4.85□□□□□ -1.63
PRKDC-202ENST00000338368 RBMY1CP0DJD4 496 aa4.85□□□□□ -1.63
PRKDC-202ENST00000338368 CD28P10747 220 aa4.85□□□□□ -1.63
PRKDC-202ENST00000338368 UNQ9165/PRO28630Q6UXU0 137 aa4.85□□□□□ -1.63
PRKDC-202ENST00000338368 Q8N6K4 173 aa4.85□□□□□ -1.63
PRKDC-202ENST00000338368 CCDC140Q96MF4 163 aa4.85□□□□□ -1.63
PRKDC-202ENST00000338368 GATA1P15976 413 aaPredicted RBP4.85□□□□□ -1.63
PRKDC-202ENST00000338368 BCL6BQ8N143 479 aaPredicted RBP4.85□□□□□ -1.63
PRKDC-202ENST00000338368 MYCNOSP40205 109 aa4.85□□□□□ -1.63
PRKDC-202ENST00000338368 TRPT1Q86TN4 253 aaKnown RBP4.85□□□□□ -1.63
PRKDC-202ENST00000338368 A0A087X0K7 114 aa4.85□□□□□ -1.63
PRKDC-202ENST00000338368 TRGV4A0A0C4DH28 118 aa4.85□□□□□ -1.63
PRKDC-202ENST00000338368 TMEM89A2RUT3 159 aa4.84□□□□□ -1.63
PRKDC-202ENST00000338368 DLEU1O43261 78 aa4.84□□□□□ -1.63
PRKDC-202ENST00000338368 TP53TG1Q9Y2A0 90 aa4.84□□□□□ -1.63
PRKDC-202ENST00000338368 A0A1W2PPR1 153 aa4.84□□□□□ -1.63
PRKDC-202ENST00000338368 H3BQ85 93 aa4.84□□□□□ -1.63
PRKDC-202ENST00000338368 INSP01308 110 aa4.84□□□□□ -1.63
PRKDC-202ENST00000338368 IGF1P05019 195 aa4.84□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 89.5 ms