RNA–Protein interactions for RNA: ENST00000334944.9

SF1-202, Transcript of splicing factor 1, humanhuman

TSL 1 (best) BASIC

Gene SF1, Length 3,094 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-202ENST00000334944 GFRA4Q9GZZ7 299 aa10.75□□□□□ -0.69
SF1-202ENST00000334944 ZNF492Q9P255 531 aa10.75□□□□□ -0.69
SF1-202ENST00000334944 IGKV2-40A0A087WW87 121 aaPredicted RBP10.75□□□□□ -0.69
SF1-202ENST00000334944 IGKV2D-40P01614 121 aaPredicted RBP10.75□□□□□ -0.69
SF1-202ENST00000334944 SMCPP49901 116 aaPredicted RBP10.75□□□□□ -0.69
SF1-202ENST00000334944 Q8TAT8 98 aa10.75□□□□□ -0.69
SF1-202ENST00000334944 HIST1H4GQ99525 98 aa10.75□□□□□ -0.69
SF1-202ENST00000334944 ERG28Q9UKR5 140 aa10.75□□□□□ -0.69
SF1-202ENST00000334944 HHLA3Q9XRX5 114 aa10.75□□□□□ -0.69
SF1-202ENST00000334944 ZANQ9Y493 2812 aa10.75□□□□□ -0.69
SF1-202ENST00000334944 LYZL1Q6UWQ5 148 aa10.74□□□□□ -0.69
SF1-202ENST00000334944 ITLN2Q8WWU7 325 aaPredicted RBP10.74□□□□□ -0.69
SF1-202ENST00000334944 FOXC2Q99958 501 aa10.74□□□□□ -0.69
SF1-202ENST00000334944 SIRPDQ9H106 197 aa10.74□□□□□ -0.69
SF1-202ENST00000334944 TMEM14CQ9P0S9 112 aa10.74□□□□□ -0.69
SF1-202ENST00000334944 TRBV20-1A0A075B6N2 111 aa10.74□□□□□ -0.69
SF1-202ENST00000334944 A6NJY4 79 aa10.74□□□□□ -0.69
SF1-202ENST00000334944 EVI2AP22794 236 aa10.74□□□□□ -0.69
SF1-202ENST00000334944 TTC9CQ8N5M4 171 aa10.74□□□□□ -0.69
SF1-202ENST00000334944 KIR2DL4Q99706 377 aa10.74□□□□□ -0.69
SF1-202ENST00000334944 CRIP1P50238 77 aa10.73□□□□□ -0.69
SF1-202ENST00000334944 MRPL51Q4U2R6 128 aaKnown RBP10.73□□□□□ -0.69
SF1-202ENST00000334944 Q8N9W7 124 aa10.73□□□□□ -0.69
SF1-202ENST00000334944 CKS2P33552 79 aa10.73□□□□□ -0.69
SF1-202ENST00000334944 BRD3OSQ6XYD6 125 aa10.73□□□□□ -0.69
SF1-202ENST00000334944 TRAV40A0A0B4J280 105 aa10.73□□□□□ -0.69
SF1-202ENST00000334944 LOC107984156A0A0G2JMH3 177 aa10.73□□□□□ -0.69
SF1-202ENST00000334944 ATP6V0E1O15342 81 aa10.73□□□□□ -0.69
SF1-202ENST00000334944 CTSGP08311 255 aa10.73□□□□□ -0.69
SF1-202ENST00000334944 C15orf32Q32M92 178 aa10.73□□□□□ -0.69
SF1-202ENST00000334944 ARL17AQ8IVW1 177 aa10.73□□□□□ -0.69
SF1-202ENST00000334944 C1QTNF4Q9BXJ3 329 aa10.73□□□□□ -0.69
SF1-202ENST00000334944 LRRK2Q5S007 2527 aa10.73□□□□□ -0.69
SF1-202ENST00000334944 MRPS12O15235 138 aaKnown RBP10.72□□□□□ -0.69
SF1-202ENST00000334944 LEPP41159 167 aa10.72□□□□□ -0.69
SF1-202ENST00000334944 ODF1Q14990 250 aa10.72□□□□□ -0.69
SF1-202ENST00000334944 ORMDL3Q8N138 153 aa10.72□□□□□ -0.69
SF1-202ENST00000334944 Q8N6K4 173 aa10.72□□□□□ -0.69
SF1-202ENST00000334944 TRBV7-9A0A0J9YWB2 115 aa10.72□□□□□ -0.69
SF1-202ENST00000334944 GATA1P15976 413 aaPredicted RBP10.72□□□□□ -0.69
SF1-202ENST00000334944 PSMB2P49721 201 aa10.72□□□□□ -0.69
SF1-202ENST00000334944 EFNA4P52798 201 aa10.72□□□□□ -0.69
SF1-202ENST00000334944 RRN3P1Q2M238 152 aa10.72□□□□□ -0.69
SF1-202ENST00000334944 AJUBAQ96IF1 538 aa10.72□□□□□ -0.69
SF1-202ENST00000334944 DOPEY2Q9Y3R5 2298 aa10.72□□□□□ -0.69
SF1-202ENST00000334944 TMEM8BA6NDV4 472 aa10.71□□□□□ -0.69
SF1-202ENST00000334944 LMO4P61968 165 aa10.71□□□□□ -0.69
SF1-202ENST00000334944 ZFP2Q6ZN57 461 aa10.71□□□□□ -0.69
SF1-202ENST00000334944 ZNF502Q8TBZ5 544 aa10.71□□□□□ -0.69
SF1-202ENST00000334944 OR11H12B2RN74 326 aa10.71□□□□□ -0.69
SF1-202ENST00000334944 CLEC3BP05452 202 aa10.71□□□□□ -0.69
SF1-202ENST00000334944 GAGE5Q13069 117 aa10.71□□□□□ -0.69
SF1-202ENST00000334944 GAGE6Q13070 117 aa10.71□□□□□ -0.69
SF1-202ENST00000334944 OR11H1Q8NG94 326 aa10.71□□□□□ -0.69
SF1-202ENST00000334944 OR11H2Q8NH07 326 aa10.71□□□□□ -0.69
SF1-202ENST00000334944 MSRB1Q9NZV6 116 aa10.71□□□□□ -0.69
SF1-202ENST00000334944 IGKCP01834 107 aa10.7□□□□□ -0.7
SF1-202ENST00000334944 FAM104BQ5XKR9 115 aa10.7□□□□□ -0.7
SF1-202ENST00000334944 AAMDCQ9H7C9 122 aa10.7□□□□□ -0.7
SF1-202ENST00000334944 H3BVH4 76 aa10.7□□□□□ -0.7
SF1-202ENST00000334944 CLEC19AQ6UXS0 136 aa10.7□□□□□ -0.7
SF1-202ENST00000334944 RNF182Q8N6D2 247 aa10.7□□□□□ -0.7
SF1-202ENST00000334944 C3orf56Q8N813 242 aa10.7□□□□□ -0.7
SF1-202ENST00000334944 CARD19Q96LW7 228 aa10.7□□□□□ -0.7
SF1-202ENST00000334944 DOPEY1Q5JWR5 2465 aa10.69□□□□□ -0.7
SF1-202ENST00000334944 BRI3O95415 125 aa10.69□□□□□ -0.7
SF1-202ENST00000334944 IGHV4-39P01824 125 aa10.69□□□□□ -0.7
SF1-202ENST00000334944 TMEM75Q8N9X5 138 aa10.69□□□□□ -0.7
SF1-202ENST00000334944 HIGD1BQ9P298 99 aa10.69□□□□□ -0.7
SF1-202ENST00000334944 SMAD5-AS1Q9Y6J3 95 aa10.69□□□□□ -0.7
SF1-202ENST00000334944 CCDC179H3BU77 68 aa10.69□□□□□ -0.7
SF1-202ENST00000334944 TWIST1Q15672 202 aa10.69□□□□□ -0.7
SF1-202ENST00000334944 MINOS1Q5TGZ0 78 aa10.69□□□□□ -0.7
SF1-202ENST00000334944 MRPL35Q9NZE8 188 aaKnown RBP10.69□□□□□ -0.7
SF1-202ENST00000334944 MINOS1-NBL1R4GNA1 71 aa10.69□□□□□ -0.7
SF1-202ENST00000334944 UBE2E1P51965 193 aa10.68□□□□□ -0.7
SF1-202ENST00000334944 PAX8Q06710 450 aa10.68□□□□□ -0.7
SF1-202ENST00000334944 Q6AWC8 147 aa10.68□□□□□ -0.7
SF1-202ENST00000334944 C1orf122Q6ZSJ8 110 aa10.68□□□□□ -0.7
SF1-202ENST00000334944 ABCA12Q86UK0 2595 aa10.68□□□□□ -0.7
SF1-202ENST00000334944 ERCC8Q13216 396 aa10.68□□□□□ -0.7
SF1-202ENST00000334944 ZNF462Q96JM2 2506 aa10.68□□□□□ -0.7
SF1-202ENST00000334944 CENPVL3A0A0U1RRI6 287 aa10.67□□□□□ -0.7
SF1-202ENST00000334944 NHLRC4P0CG21 123 aaPredicted RBP10.67□□□□□ -0.7
SF1-202ENST00000334944 MORN3Q6PF18 240 aaPredicted RBP10.67□□□□□ -0.7
SF1-202ENST00000334944 NRGNQ92686 78 aa10.67□□□□□ -0.7
SF1-202ENST00000334944 PRORYQ9H606 182 aa10.67□□□□□ -0.7
SF1-202ENST00000334944 CT45A10P0DMU9 189 aa10.67□□□□□ -0.7
SF1-202ENST00000334944 CFAP126Q5VTH2 177 aa10.67□□□□□ -0.7
SF1-202ENST00000334944 PRAC2D3DTV9 90 aa10.66□□□□□ -0.7
SF1-202ENST00000334944 NPFFO15130 113 aa10.66□□□□□ -0.7
SF1-202ENST00000334944 ZNF80P51504 273 aaPredicted RBP10.66□□□□□ -0.7
SF1-202ENST00000334944 EBI3Q14213 229 aa10.66□□□□□ -0.7
SF1-202ENST00000334944 LY6EQ16553 131 aa10.66□□□□□ -0.7
SF1-202ENST00000334944 TMEM158Q8WZ71 300 aa10.66□□□□□ -0.7
SF1-202ENST00000334944 A0A1B0GW15 77 aa10.66□□□□□ -0.7
SF1-202ENST00000334944 LINC01549A6NIU2 74 aa10.66□□□□□ -0.7
SF1-202ENST00000334944 SCGB2A1O75556 95 aa10.66□□□□□ -0.7
SF1-202ENST00000334944 RPL32P62910 135 aaKnown RBP10.66□□□□□ -0.7
SF1-202ENST00000334944 PTPN13Q12923 2485 aa10.66□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 67.5 ms