RNA–Protein interactions for RNA: ENST00000333090.4

TSKU-201, Transcript of tsukushi, small leucine rich proteoglycan, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSKU, Length 2,712 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSKU-201ENST00000333090 GAGE12HA6NDE8 117 aa18.08■□□□□ 0.49
TSKU-201ENST00000333090 K7ENP7 123 aa18.08■□□□□ 0.49
TSKU-201ENST00000333090 EBI3Q14213 229 aa18.08■□□□□ 0.49
TSKU-201ENST00000333090 CD300EQ496F6 205 aaPredicted RBP18.08■□□□□ 0.49
TSKU-201ENST00000333090 FAM110DQ8TAY7 271 aaPredicted RBP18.08■□□□□ 0.49
TSKU-201ENST00000333090 VKORC1Q9BQB6 163 aa18.08■□□□□ 0.49
TSKU-201ENST00000333090 OR11H12B2RN74 326 aa18.08■□□□□ 0.48
TSKU-201ENST00000333090 F8VRH5 84 aa18.08■□□□□ 0.48
TSKU-201ENST00000333090 C8orf86Q6ZUL3 223 aa18.08■□□□□ 0.48
TSKU-201ENST00000333090 OR11H1Q8NG94 326 aa18.08■□□□□ 0.48
TSKU-201ENST00000333090 OR11H2Q8NH07 326 aa18.08■□□□□ 0.48
TSKU-201ENST00000333090 H7C1H1 209 aa18.07■□□□□ 0.48
TSKU-201ENST00000333090 SMIM2Q9BVW6 85 aa18.07■□□□□ 0.48
TSKU-201ENST00000333090 J3KRW8 73 aa18.07■□□□□ 0.48
TSKU-201ENST00000333090 ATP6V0E1O15342 81 aa18.07■□□□□ 0.48
TSKU-201ENST00000333090 RRN3P1Q2M238 152 aa18.07■□□□□ 0.48
TSKU-201ENST00000333090 CCDC140Q96MF4 163 aa18.07■□□□□ 0.48
TSKU-201ENST00000333090 SPRY2O43597 315 aa18.07■□□□□ 0.48
TSKU-201ENST00000333090 CIDEAO60543 219 aa18.07■□□□□ 0.48
TSKU-201ENST00000333090 LCNL1Q6ZST4 164 aa18.07■□□□□ 0.48
TSKU-201ENST00000333090 TRBV7-3A0A075B6L6 115 aa18.06■□□□□ 0.48
TSKU-201ENST00000333090 GAGE13Q4V321 117 aa18.06■□□□□ 0.48
TSKU-201ENST00000333090 SCGB3A1Q96QR1 104 aa18.06■□□□□ 0.48
TSKU-201ENST00000333090 SPAG8Q99932 426 aaPredicted RBP18.06■□□□□ 0.48
TSKU-201ENST00000333090 CYSLTR1Q9Y271 337 aa18.06■□□□□ 0.48
TSKU-201ENST00000333090 CHTOPQ9Y3Y2 248 aaKnown RBP18.06■□□□□ 0.48
TSKU-201ENST00000333090 MYMXA0A1B0GTQ4 84 aa18.05■□□□□ 0.48
TSKU-201ENST00000333090 OOSP1A8MZH6 123 aa18.05■□□□□ 0.48
TSKU-201ENST00000333090 G3V318 75 aa18.05■□□□□ 0.48
TSKU-201ENST00000333090 METTL26Q96S19 204 aa18.05■□□□□ 0.48
TSKU-201ENST00000333090 SPTAN1Q13813 2472 aaKnown RBP18.04■□□□□ 0.48
TSKU-201ENST00000333090 MINOS1Q5TGZ0 78 aa18.04■□□□□ 0.48
TSKU-201ENST00000333090 MINOS1-NBL1R4GNA1 71 aa18.04■□□□□ 0.48
TSKU-201ENST00000333090 IGHV4-4A0A075B6R2 117 aa18.04■□□□□ 0.48
TSKU-201ENST00000333090 TRAV12-1A0A0B4J245 112 aa18.04■□□□□ 0.48
TSKU-201ENST00000333090 M0R381 172 aa18.04■□□□□ 0.48
TSKU-201ENST00000333090 PRR9Q5T870 116 aa18.04■□□□□ 0.48
TSKU-201ENST00000333090 C9orf47Q6ZRZ4 202 aa18.03■□□□□ 0.48
TSKU-201ENST00000333090 MRAP2Q96G30 205 aa18.03■□□□□ 0.48
TSKU-201ENST00000333090 CCL21O00585 134 aa18.03■□□□□ 0.48
TSKU-201ENST00000333090 ZFP36P26651 326 aaKnown RBP18.02■□□□□ 0.48
TSKU-201ENST00000333090 RAXQ9Y2V3 346 aa18.02■□□□□ 0.48
TSKU-201ENST00000333090 LINC01548A6NM66 108 aa18.02■□□□□ 0.48
TSKU-201ENST00000333090 IGF1P05019 195 aa18.02■□□□□ 0.48
TSKU-201ENST00000333090 C16orf92Q96LL3 132 aa18.02■□□□□ 0.48
TSKU-201ENST00000333090 INSL3P51460 131 aa18.01■□□□□ 0.47
TSKU-201ENST00000333090 SUMO2P61956 95 aaKnown RBP18.01■□□□□ 0.47
TSKU-201ENST00000333090 ORMDL2Q53FV1 153 aa18.01■□□□□ 0.47
TSKU-201ENST00000333090 SCGB2A2Q13296 93 aa18.01■□□□□ 0.47
TSKU-201ENST00000333090 HIF1ANQ9NWT6 349 aa18.01■□□□□ 0.47
TSKU-201ENST00000333090 SCGB1A1P11684 91 aa18■□□□□ 0.47
TSKU-201ENST00000333090 RPL39LQ96EH5 51 aaKnown RBP18■□□□□ 0.47
TSKU-201ENST00000333090 MRPL53Q96EL3 112 aaKnown RBP18■□□□□ 0.47
TSKU-201ENST00000333090 PRO0461Q9UI25 63 aa18■□□□□ 0.47
TSKU-201ENST00000333090 C1orf122Q6ZSJ8 110 aa18■□□□□ 0.47
TSKU-201ENST00000333090 TOMM6Q96B49 74 aa18■□□□□ 0.47
TSKU-201ENST00000333090 NEXN-AS1Q8NBZ9 246 aa18■□□□□ 0.47
TSKU-201ENST00000333090 RASL10AQ92737 203 aa18■□□□□ 0.47
TSKU-201ENST00000333090 EEF1AKMT3Q96AZ1 226 aa18■□□□□ 0.47
TSKU-201ENST00000333090 A0A1B0GWB2 263 aa17.99■□□□□ 0.47
TSKU-201ENST00000333090 LGALS1P09382 135 aaKnown RBP17.99■□□□□ 0.47
TSKU-201ENST00000333090 SPATA25Q9BR10 227 aa17.99■□□□□ 0.47
TSKU-201ENST00000333090 HOXA3O43365 443 aaPredicted RBP17.99■□□□□ 0.47
TSKU-201ENST00000333090 CLEC2AQ6UVW9 174 aa17.99■□□□□ 0.47
TSKU-201ENST00000333090 PGPEP1Q9NXJ5 209 aa17.99■□□□□ 0.47
TSKU-201ENST00000333090 MORN3Q6PF18 240 aaPredicted RBP17.98■□□□□ 0.47
TSKU-201ENST00000333090 C14orf178Q8N769 122 aaPredicted RBP17.98■□□□□ 0.47
TSKU-201ENST00000333090 S100A4P26447 101 aaKnown RBP17.98■□□□□ 0.47
TSKU-201ENST00000333090 PRADC1Q9BSG0 188 aa17.98■□□□□ 0.47
TSKU-201ENST00000333090 C2orf66Q6UXQ4 117 aa17.97■□□□□ 0.47
TSKU-201ENST00000333090 MRPL16Q9NX20 251 aaKnown RBP17.97■□□□□ 0.47
TSKU-201ENST00000333090 LINC01619G3V211 115 aa17.96■□□□□ 0.47
TSKU-201ENST00000333090 MGPP08493 103 aa17.96■□□□□ 0.47
TSKU-201ENST00000333090 BAALCQ8WXS3 180 aa17.96■□□□□ 0.47
TSKU-201ENST00000333090 SCGB1D4Q6XE38 83 aa17.96■□□□□ 0.47
TSKU-201ENST00000333090 C20orf173Q96LM9 149 aa17.96■□□□□ 0.47
TSKU-201ENST00000333090 ITPR1Q14643 2758 aa17.96■□□□□ 0.47
TSKU-201ENST00000333090 ZNF815PA8K554 130 aa17.95■□□□□ 0.46
TSKU-201ENST00000333090 NDUFS8O00217 210 aa17.95■□□□□ 0.46
TSKU-201ENST00000333090 ATP5G2Q06055 141 aa17.95■□□□□ 0.46
TSKU-201ENST00000333090 SFTA2Q6UW10 78 aa17.95■□□□□ 0.46
TSKU-201ENST00000333090 SLC25A16P16260 332 aa17.95■□□□□ 0.46
TSKU-201ENST00000333090 PRSS29PA6NIE9 313 aa17.94■□□□□ 0.46
TSKU-201ENST00000333090 SIRPDQ9H106 197 aa17.94■□□□□ 0.46
TSKU-201ENST00000333090 DPH3P1Q9H4G8 78 aa17.94■□□□□ 0.46
TSKU-201ENST00000333090 PHLDA3Q9Y5J5 127 aa17.94■□□□□ 0.46
TSKU-201ENST00000333090 TRBV7-1A0A0A6YYK4 115 aa17.94■□□□□ 0.46
TSKU-201ENST00000333090 APOMO95445 188 aa17.94■□□□□ 0.46
TSKU-201ENST00000333090 DEFB1P60022 68 aa17.94■□□□□ 0.46
TSKU-201ENST00000333090 C20orf78Q9BR46 151 aa17.94■□□□□ 0.46
TSKU-201ENST00000333090 ADORA2A-AS1P86434 159 aa17.93■□□□□ 0.46
TSKU-201ENST00000333090 U3KQE9 123 aa17.93■□□□□ 0.46
TSKU-201ENST00000333090 FBXL19-AS1Q494R0 122 aa17.93■□□□□ 0.46
TSKU-201ENST00000333090 C11orf71Q6IPW1 123 aa17.93■□□□□ 0.46
TSKU-201ENST00000333090 SAA4P35542 130 aa17.92■□□□□ 0.46
TSKU-201ENST00000333090 SRSF9Q13242 221 aaKnown RBP eCLIP17.92■□□□□ 0.46
TSKU-201ENST00000333090 LINC01549A6NIU2 74 aa17.92■□□□□ 0.46
TSKU-201ENST00000333090 PLEKHB2Q96CS7 222 aa17.92■□□□□ 0.46
TSKU-201ENST00000333090 HIVEP3Q5T1R4 2406 aa17.92■□□□□ 0.46
TSKU-201ENST00000333090 ASIPP42127 132 aa17.92■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 81.7 ms