RNA–Protein interactions for RNA: ENST00000330687.8

CMTM4-201, Transcript of CKLF like MARVEL transmembrane domain containing 4, humanhuman

TSL 1 (best) BASIC

Gene CMTM4, Length 3,414 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM4-201ENST00000330687 GATA4P43694 442 aa15.94■□□□□ 0.14
CMTM4-201ENST00000330687 LYRM7Q5U5X0 104 aa15.94■□□□□ 0.14
CMTM4-201ENST00000330687 PVRIGQ6DKI7 326 aa15.94■□□□□ 0.14
CMTM4-201ENST00000330687 NTN5Q8WTR8 489 aaPredicted RBP15.94■□□□□ 0.14
CMTM4-201ENST00000330687 ARRDC1-AS1Q9H2J1 176 aa15.94■□□□□ 0.14
CMTM4-201ENST00000330687 RPL39LQ96EH5 51 aaKnown RBP15.94■□□□□ 0.14
CMTM4-201ENST00000330687 SVEP1Q4LDE5 3571 aa15.93■□□□□ 0.14
CMTM4-201ENST00000330687 SLC25A20O43772 301 aa15.93■□□□□ 0.14
CMTM4-201ENST00000330687 LOXP28300 417 aaPredicted RBP15.93■□□□□ 0.14
CMTM4-201ENST00000330687 TMEM30BQ3MIR4 351 aa15.93■□□□□ 0.14
CMTM4-201ENST00000330687 IGLV3-9A0A075B6K5 115 aa15.93■□□□□ 0.14
CMTM4-201ENST00000330687 TRBV6-1A0A0K0K1D8 114 aa15.93■□□□□ 0.14
CMTM4-201ENST00000330687 FAM159AQ6UWV7 190 aa15.93■□□□□ 0.14
CMTM4-201ENST00000330687 LINC00574Q9H8X3 128 aa15.93■□□□□ 0.14
CMTM4-201ENST00000330687 TIMM23O14925 209 aa15.93■□□□□ 0.14
CMTM4-201ENST00000330687 CLEC3BP05452 202 aa15.93■□□□□ 0.14
CMTM4-201ENST00000330687 RPL32P62910 135 aaKnown RBP15.92■□□□□ 0.14
CMTM4-201ENST00000330687 C14orf178Q8N769 122 aaPredicted RBP15.92■□□□□ 0.14
CMTM4-201ENST00000330687 CEACAM4O75871 244 aa15.91■□□□□ 0.14
CMTM4-201ENST00000330687 MFAP4P55083 255 aa15.91■□□□□ 0.14
CMTM4-201ENST00000330687 NDUFV3P56181 108 aaKnown RBP15.91■□□□□ 0.14
CMTM4-201ENST00000330687 ATP6V0E2Q8NHE4 81 aa15.91■□□□□ 0.14
CMTM4-201ENST00000330687 C11orf21Q9P2W6 132 aa15.91■□□□□ 0.14
CMTM4-201ENST00000330687 DKK4Q9UBT3 224 aa15.91■□□□□ 0.14
CMTM4-201ENST00000330687 IGKV3-7A0A075B6H7 116 aa15.91■□□□□ 0.14
CMTM4-201ENST00000330687 IGKV3D-20A0A0C4DH25 116 aa15.91■□□□□ 0.14
CMTM4-201ENST00000330687 C17orf100A8MU93 164 aa15.91■□□□□ 0.14
CMTM4-201ENST00000330687 DLX6P56179 175 aa15.91■□□□□ 0.14
CMTM4-201ENST00000330687 C2orf66Q6UXQ4 117 aa15.91■□□□□ 0.14
CMTM4-201ENST00000330687 Q6ZS46 218 aa15.91■□□□□ 0.14
CMTM4-201ENST00000330687 SPTAN1Q13813 2472 aaKnown RBP15.9■□□□□ 0.14
CMTM4-201ENST00000330687 NDUFA11Q86Y39 141 aa15.9■□□□□ 0.14
CMTM4-201ENST00000330687 C21orf62Q9NYP8 219 aa15.9■□□□□ 0.14
CMTM4-201ENST00000330687 VSTM5A8MXK1 200 aa15.9■□□□□ 0.14
CMTM4-201ENST00000330687 TMEM262E9PQX1 116 aa15.9■□□□□ 0.14
CMTM4-201ENST00000330687 MRPS12O15235 138 aaKnown RBP15.9■□□□□ 0.14
CMTM4-201ENST00000330687 TRAV2A0A0B4J234 112 aa15.89■□□□□ 0.13
CMTM4-201ENST00000330687 IFITM1P13164 125 aa15.89■□□□□ 0.13
CMTM4-201ENST00000330687 TEX36Q5VZQ5 186 aa15.89■□□□□ 0.13
CMTM4-201ENST00000330687 SPRY4Q9C004 299 aa15.89■□□□□ 0.13
CMTM4-201ENST00000330687 NHLRC4P0CG21 123 aaPredicted RBP15.88■□□□□ 0.13
CMTM4-201ENST00000330687 SEM1Q6ZVN7 128 aa15.88■□□□□ 0.13
CMTM4-201ENST00000330687 SMIM2Q9BVW6 85 aa15.88■□□□□ 0.13
CMTM4-201ENST00000330687 TMEM178BH3BS89 294 aa15.88■□□□□ 0.13
CMTM4-201ENST00000330687 PDE6HQ13956 83 aa15.88■□□□□ 0.13
CMTM4-201ENST00000330687 IGLV2-18A0A075B6J9 118 aa15.87■□□□□ 0.13
CMTM4-201ENST00000330687 NRACQ8N912 160 aa15.87■□□□□ 0.13
CMTM4-201ENST00000330687 TEX49A0A1B0GTD5 131 aa15.86■□□□□ 0.13
CMTM4-201ENST00000330687 TCF15Q12870 199 aa15.86■□□□□ 0.13
CMTM4-201ENST00000330687 MEIG1Q5JSS6 88 aa15.86■□□□□ 0.13
CMTM4-201ENST00000330687 C15orf53Q8NAA6 179 aa15.86■□□□□ 0.13
CMTM4-201ENST00000330687 BUB1B-PAK6H3BSN5 160 aa15.86■□□□□ 0.13
CMTM4-201ENST00000330687 DEFB109BQ30KR1 87 aa15.86■□□□□ 0.13
CMTM4-201ENST00000330687 RASL10AQ92737 203 aa15.86■□□□□ 0.13
CMTM4-201ENST00000330687 BAALCQ8WXS3 180 aa15.85■□□□□ 0.13
CMTM4-201ENST00000330687 DUSP14O95147 198 aaKnown RBP15.85■□□□□ 0.13
CMTM4-201ENST00000330687 DEFB1P60022 68 aa15.85■□□□□ 0.13
CMTM4-201ENST00000330687 LRBAP50851 2863 aa15.85■□□□□ 0.13
CMTM4-201ENST00000330687 TRAV17A0A0B4J275 112 aa15.85■□□□□ 0.13
CMTM4-201ENST00000330687 IGHG3P01860 377 aa15.85■□□□□ 0.13
CMTM4-201ENST00000330687 CFC1BP0CG36 223 aa15.85■□□□□ 0.13
CMTM4-201ENST00000330687 CFC1P0CG37 223 aa15.85■□□□□ 0.13
CMTM4-201ENST00000330687 SUMO2P61956 95 aaKnown RBP15.85■□□□□ 0.13
CMTM4-201ENST00000330687 NOTCH3Q9UM47 2321 aa15.84■□□□□ 0.13
CMTM4-201ENST00000330687 PRSS2P07478 247 aa15.84■□□□□ 0.13
CMTM4-201ENST00000330687 ADIPOQQ15848 244 aa15.84■□□□□ 0.13
CMTM4-201ENST00000330687 AGPAT4-IT1Q9H0P7 198 aa15.84■□□□□ 0.13
CMTM4-201ENST00000330687 SMAD5-AS1Q9Y6J3 95 aa15.84■□□□□ 0.13
CMTM4-201ENST00000330687 PRO1854Q9UHT4 67 aa15.84■□□□□ 0.13
CMTM4-201ENST00000330687 C11orf86A6NJI1 115 aa15.84■□□□□ 0.13
CMTM4-201ENST00000330687 NPC2P61916 151 aa15.84■□□□□ 0.13
CMTM4-201ENST00000330687 RAB1BQ9H0U4 201 aa15.84■□□□□ 0.13
CMTM4-201ENST00000330687 DOPEY2Q9Y3R5 2298 aa15.83■□□□□ 0.13
CMTM4-201ENST00000330687 F5H697 171 aa15.83■□□□□ 0.13
CMTM4-201ENST00000330687 HERVK_113P61574 105 aa15.83■□□□□ 0.13
CMTM4-201ENST00000330687 BSPH1Q075Z2 132 aa15.83■□□□□ 0.13
CMTM4-201ENST00000330687 ASH1LQ9NR48 2969 aaKnown RBP15.83■□□□□ 0.12
CMTM4-201ENST00000330687 NDPQ00604 133 aa15.83■□□□□ 0.12
CMTM4-201ENST00000330687 ZNF575Q86XF7 245 aa15.83■□□□□ 0.12
CMTM4-201ENST00000330687 LINC00311Q8N616 119 aa15.83■□□□□ 0.12
CMTM4-201ENST00000330687 CUL9Q8IWT3 2517 aa15.83■□□□□ 0.12
CMTM4-201ENST00000330687 TRAV8-4A0A0B4J246 113 aa15.82■□□□□ 0.12
CMTM4-201ENST00000330687 UBE2D1P51668 147 aa15.82■□□□□ 0.12
CMTM4-201ENST00000330687 LINC01559Q495D7 138 aa15.82■□□□□ 0.12
CMTM4-201ENST00000330687 C10orf126Q8N4M7 172 aa15.82■□□□□ 0.12
CMTM4-201ENST00000330687 UBE2D3P61077 147 aa15.82■□□□□ 0.12
CMTM4-201ENST00000330687 UBE2D2P62837 147 aa15.82■□□□□ 0.12
CMTM4-201ENST00000330687 ECSCRQ19T08 205 aa15.82■□□□□ 0.12
CMTM4-201ENST00000330687 CRYGBP07316 175 aa15.82■□□□□ 0.12
CMTM4-201ENST00000330687 ORMDL2Q53FV1 153 aa15.82■□□□□ 0.12
CMTM4-201ENST00000330687 PHLDA3Q9Y5J5 127 aa15.82■□□□□ 0.12
CMTM4-201ENST00000330687 A4D1N5 150 aa15.81■□□□□ 0.12
CMTM4-201ENST00000330687 IGF1P05019 195 aa15.81■□□□□ 0.12
CMTM4-201ENST00000330687 CD7P09564 240 aa15.81■□□□□ 0.12
CMTM4-201ENST00000330687 ADARB2-AS1A8MUL3 147 aa15.81■□□□□ 0.12
CMTM4-201ENST00000330687 IGHG4P01861 327 aa15.81■□□□□ 0.12
CMTM4-201ENST00000330687 RPL11P62913 178 aaKnown RBP15.81■□□□□ 0.12
CMTM4-201ENST00000330687 Q8N1Y9 231 aa15.81■□□□□ 0.12
CMTM4-201ENST00000330687 SORL1Q92673 2214 aa15.81■□□□□ 0.12
CMTM4-201ENST00000330687 RHODO00212 210 aa15.81■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 140.2 ms