RNA–Protein interactions for RNA: ENST00000328560.12

ATP2C1-201, Transcript of ATPase secretory pathway Ca2+ transporting 1, humanhuman

TSL 1 (best) BASIC

Gene ATP2C1, Length 3,484 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2C1-201ENST00000328560 H3BUX3 64 aa10.72□□□□□ -0.69
ATP2C1-201ENST00000328560 ODF1Q14990 250 aa10.72□□□□□ -0.69
ATP2C1-201ENST00000328560 SRSF2Q01130 221 aaKnown RBP10.72□□□□□ -0.69
ATP2C1-201ENST00000328560 MYOZ3Q8TDC0 251 aa10.72□□□□□ -0.69
ATP2C1-201ENST00000328560 PKD1L2Q7Z442 2459 aa10.72□□□□□ -0.69
ATP2C1-201ENST00000328560 BLCAPP62952 87 aa10.71□□□□□ -0.69
ATP2C1-201ENST00000328560 ZC2HC1BQ5TFG8 222 aa10.71□□□□□ -0.69
ATP2C1-201ENST00000328560 Q8N8P6 123 aa10.71□□□□□ -0.69
ATP2C1-201ENST00000328560 OR10J6PQ8NGY7 276 aa10.71□□□□□ -0.69
ATP2C1-201ENST00000328560 ABCA2Q9BZC7 2435 aa10.71□□□□□ -0.69
ATP2C1-201ENST00000328560 TMEM8BA6NDV4 472 aa10.71□□□□□ -0.69
ATP2C1-201ENST00000328560 IGKCP01834 107 aa10.71□□□□□ -0.69
ATP2C1-201ENST00000328560 MGPP08493 103 aa10.71□□□□□ -0.69
ATP2C1-201ENST00000328560 RNASE4P34096 147 aaKnown RBP10.71□□□□□ -0.69
ATP2C1-201ENST00000328560 HSD52Q0P140 79 aa10.71□□□□□ -0.69
ATP2C1-201ENST00000328560 C9orf47Q6ZRZ4 202 aa10.71□□□□□ -0.7
ATP2C1-201ENST00000328560 OR9G4Q8NGQ1 327 aa10.71□□□□□ -0.7
ATP2C1-201ENST00000328560 PIFOQ8TCI5 191 aa10.71□□□□□ -0.7
ATP2C1-201ENST00000328560 K7EMI3 77 aa10.7□□□□□ -0.7
ATP2C1-201ENST00000328560 RBX1P62877 108 aa10.7□□□□□ -0.7
ATP2C1-201ENST00000328560 Q6ZS46 218 aa10.7□□□□□ -0.7
ATP2C1-201ENST00000328560 C14orf178Q8N769 122 aaPredicted RBP10.7□□□□□ -0.7
ATP2C1-201ENST00000328560 DPF1Q92782 380 aa10.7□□□□□ -0.7
ATP2C1-201ENST00000328560 USP9YO00507 2555 aaPredicted RBP10.7□□□□□ -0.7
ATP2C1-201ENST00000328560 ZFHX3Q15911 3703 aa10.7□□□□□ -0.7
ATP2C1-201ENST00000328560 FAM208BQ5VWN6 2430 aa10.7□□□□□ -0.7
ATP2C1-201ENST00000328560 GAGE12BA1L429 117 aa10.7□□□□□ -0.7
ATP2C1-201ENST00000328560 CST9LQ9H4G1 147 aa10.7□□□□□ -0.7
ATP2C1-201ENST00000328560 MRPL35Q9NZE8 188 aaKnown RBP10.7□□□□□ -0.7
ATP2C1-201ENST00000328560 NDUFS8O00217 210 aa10.7□□□□□ -0.7
ATP2C1-201ENST00000328560 LAGE3Q14657 143 aa10.7□□□□□ -0.7
ATP2C1-201ENST00000328560 C9orf139Q6ZV77 190 aa10.7□□□□□ -0.7
ATP2C1-201ENST00000328560 PHLDA3Q9Y5J5 127 aa10.7□□□□□ -0.7
ATP2C1-201ENST00000328560 SORL1Q92673 2214 aa10.69□□□□□ -0.7
ATP2C1-201ENST00000328560 FAM223BA6NKX1 122 aa10.69□□□□□ -0.7
ATP2C1-201ENST00000328560 FAM223AQ8IWN6 122 aa10.69□□□□□ -0.7
ATP2C1-201ENST00000328560 VPS25Q9BRG1 176 aa10.69□□□□□ -0.7
ATP2C1-201ENST00000328560 U3KQE9 123 aa10.69□□□□□ -0.7
ATP2C1-201ENST00000328560 DPM2O94777 84 aa10.69□□□□□ -0.7
ATP2C1-201ENST00000328560 OR4X2Q8NGF9 303 aa10.69□□□□□ -0.7
ATP2C1-201ENST00000328560 PSMG3-AS1Q96PY0 264 aa10.69□□□□□ -0.7
ATP2C1-201ENST00000328560 NRACQ8N912 160 aa10.68□□□□□ -0.7
ATP2C1-201ENST00000328560 C10orf105Q8TEF2 133 aa10.68□□□□□ -0.7
ATP2C1-201ENST00000328560 A0A0G2JLM5 398 aa10.68□□□□□ -0.7
ATP2C1-201ENST00000328560 ADAMTSL5Q6ZMM2 481 aa10.68□□□□□ -0.7
ATP2C1-201ENST00000328560 JMJD8Q96S16 334 aa10.68□□□□□ -0.7
ATP2C1-201ENST00000328560 GNRH2O43555 120 aa10.68□□□□□ -0.7
ATP2C1-201ENST00000328560 ANXA2RQ3ZCQ2 193 aa10.68□□□□□ -0.7
ATP2C1-201ENST00000328560 NPFFR1Q9GZQ6 430 aa10.68□□□□□ -0.7
ATP2C1-201ENST00000328560 HHLA3Q9XRX5 114 aa10.68□□□□□ -0.7
ATP2C1-201ENST00000328560 IGHV4-30-2A0A087WSY4 118 aa10.67□□□□□ -0.7
ATP2C1-201ENST00000328560 A6NJY4 79 aa10.67□□□□□ -0.7
ATP2C1-201ENST00000328560 ATP5LO75964 103 aa10.67□□□□□ -0.7
ATP2C1-201ENST00000328560 MSMBP08118 114 aa10.67□□□□□ -0.7
ATP2C1-201ENST00000328560 MRPL53Q96EL3 112 aaKnown RBP10.67□□□□□ -0.7
ATP2C1-201ENST00000328560 RPL39LQ96EH5 51 aaKnown RBP10.67□□□□□ -0.7
ATP2C1-201ENST00000328560 ITPR1Q14643 2758 aa10.67□□□□□ -0.7
ATP2C1-201ENST00000328560 IGLV2-18A0A075B6J9 118 aa10.67□□□□□ -0.7
ATP2C1-201ENST00000328560 C9orf118A6NHY6 69 aa10.67□□□□□ -0.7
ATP2C1-201ENST00000328560 SRSF1Q07955 248 aaKnown RBP eCLIP10.67□□□□□ -0.7
ATP2C1-201ENST00000328560 TMEM95Q3KNT9 176 aa10.67□□□□□ -0.7
ATP2C1-201ENST00000328560 GPHB5Q86YW7 130 aa10.67□□□□□ -0.7
ATP2C1-201ENST00000328560 RHPN1-AS1Q9BWJ2 59 aa10.67□□□□□ -0.7
ATP2C1-201ENST00000328560 TRAV21A0A0B4J279 112 aa10.66□□□□□ -0.7
ATP2C1-201ENST00000328560 H3BRM9 83 aa10.66□□□□□ -0.7
ATP2C1-201ENST00000328560 EDN2P20800 178 aa10.66□□□□□ -0.7
ATP2C1-201ENST00000328560 ASIPP42127 132 aa10.66□□□□□ -0.7
ATP2C1-201ENST00000328560 ZFAND2AQ8N6M9 145 aa10.66□□□□□ -0.7
ATP2C1-201ENST00000328560 K7ERJ3 54 aa10.66□□□□□ -0.7
ATP2C1-201ENST00000328560 OCIAD2Q56VL3 154 aa10.66□□□□□ -0.7
ATP2C1-201ENST00000328560 LINC00477Q96M19 166 aa10.66□□□□□ -0.7
ATP2C1-201ENST00000328560 POLQO75417 2590 aa10.66□□□□□ -0.7
ATP2C1-201ENST00000328560 FXYD2P54710 66 aa10.66□□□□□ -0.7
ATP2C1-201ENST00000328560 NEGR1Q7Z3B1 354 aa10.66□□□□□ -0.7
ATP2C1-201ENST00000328560 CHAC1Q9BUX1 264 aa10.66□□□□□ -0.7
ATP2C1-201ENST00000328560 B4DSR2 109 aa10.65□□□□□ -0.7
ATP2C1-201ENST00000328560 NDUFA4O00483 81 aa10.65□□□□□ -0.7
ATP2C1-201ENST00000328560 IGKV3-20P01619 116 aa10.65□□□□□ -0.7
ATP2C1-201ENST00000328560 GTF2H5Q6ZYL4 71 aa10.65□□□□□ -0.7
ATP2C1-201ENST00000328560 VPS13CQ709C8 3753 aa10.64□□□□□ -0.71
ATP2C1-201ENST00000328560 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP10.64□□□□□ -0.71
ATP2C1-201ENST00000328560 SCGB3A1Q96QR1 104 aa10.64□□□□□ -0.71
ATP2C1-201ENST00000328560 SMIM2Q9BVW6 85 aa10.64□□□□□ -0.71
ATP2C1-201ENST00000328560 TRBV25-1A0A075B6N4 114 aa10.64□□□□□ -0.71
ATP2C1-201ENST00000328560 OVOL1O14753 267 aa10.64□□□□□ -0.71
ATP2C1-201ENST00000328560 SIVA1O15304 175 aa10.64□□□□□ -0.71
ATP2C1-201ENST00000328560 KLK9Q2XQG4 91 aa10.64□□□□□ -0.71
ATP2C1-201ENST00000328560 NRGNQ92686 78 aa10.64□□□□□ -0.71
ATP2C1-201ENST00000328560 USMG5Q96IX5 58 aa10.64□□□□□ -0.71
ATP2C1-201ENST00000328560 NHP2Q9NX24 153 aaKnown RBP10.64□□□□□ -0.71
ATP2C1-201ENST00000328560 KLK9Q9UKQ9 250 aa10.64□□□□□ -0.71
ATP2C1-201ENST00000328560 MYO18BQ8IUG5 2567 aa10.64□□□□□ -0.71
ATP2C1-201ENST00000328560 MEGF9Q9H1U4 602 aa10.63□□□□□ -0.71
ATP2C1-201ENST00000328560 SPCS1Q9Y6A9 102 aa10.63□□□□□ -0.71
ATP2C1-201ENST00000328560 SMIM13P0DJ93 91 aa10.63□□□□□ -0.71
ATP2C1-201ENST00000328560 SUMO2P61956 95 aaKnown RBP10.63□□□□□ -0.71
ATP2C1-201ENST00000328560 MAPKAPK5-AS1Q8N8E1 139 aa10.63□□□□□ -0.71
ATP2C1-201ENST00000328560 SAP30O75446 220 aa10.63□□□□□ -0.71
ATP2C1-201ENST00000328560 C19orf54Q5BKX5 351 aa10.63□□□□□ -0.71
ATP2C1-201ENST00000328560 ZMAT4Q9H898 229 aa10.63□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 124.1 ms