RNA–Protein interactions for RNA: ENST00000318988.10

CTDNEP1-201, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTDNEP1, Length 1,549 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-201ENST00000318988 C11orf21Q9P2W6 132 aa20.04■□□□□ 0.8
CTDNEP1-201ENST00000318988 PRB2P02812 416 aaPredicted RBP20.03■□□□□ 0.8
CTDNEP1-201ENST00000318988 ANXA2RQ3ZCQ2 193 aa20.03■□□□□ 0.8
CTDNEP1-201ENST00000318988 IGHV3OR16-12A0A075B7B8 117 aa20.02■□□□□ 0.8
CTDNEP1-201ENST00000318988 IGHV1OR15-1A0A075B7D0 117 aa20.02■□□□□ 0.8
CTDNEP1-201ENST00000318988 PYGO2Q9BRQ0 406 aa20.02■□□□□ 0.8
CTDNEP1-201ENST00000318988 IGKV3D-20A0A0C4DH25 116 aa20.02■□□□□ 0.79
CTDNEP1-201ENST00000318988 UBE2CO00762 179 aa20.02■□□□□ 0.79
CTDNEP1-201ENST00000318988 RBMY1A1P0DJD3 496 aaKnown RBP20.02■□□□□ 0.79
CTDNEP1-201ENST00000318988 RBMY1CP0DJD4 496 aa20.02■□□□□ 0.79
CTDNEP1-201ENST00000318988 RBMY1FQ15415 496 aaKnown RBP20.02■□□□□ 0.79
CTDNEP1-201ENST00000318988 MGAM2Q2M2H8 2515 aa20.01■□□□□ 0.79
CTDNEP1-201ENST00000318988 HTN1P15515 57 aa20.01■□□□□ 0.79
CTDNEP1-201ENST00000318988 TSKUQ8WUA8 353 aa20.01■□□□□ 0.79
CTDNEP1-201ENST00000318988 IL36BQ9NZH7 164 aa20■□□□□ 0.79
CTDNEP1-201ENST00000318988 S100PP25815 95 aa19.99■□□□□ 0.79
CTDNEP1-201ENST00000318988 C1orf158Q8N1D5 194 aa19.99■□□□□ 0.79
CTDNEP1-201ENST00000318988 GRIFINA4D1Z8 144 aa19.98■□□□□ 0.79
CTDNEP1-201ENST00000318988 CBY3A6NI87 242 aa19.98■□□□□ 0.79
CTDNEP1-201ENST00000318988 FRMD6-AS1P0C7T7 363 aa19.98■□□□□ 0.79
CTDNEP1-201ENST00000318988 GZMBP10144 247 aa19.98■□□□□ 0.79
CTDNEP1-201ENST00000318988 TDRG1Q3Y452 100 aa19.98■□□□□ 0.79
CTDNEP1-201ENST00000318988 KCNIP4Q6PIL6 250 aa19.98■□□□□ 0.79
CTDNEP1-201ENST00000318988 SMCO4Q9NRQ5 59 aa19.98■□□□□ 0.79
CTDNEP1-201ENST00000318988 S100A4P26447 101 aaKnown RBP19.97■□□□□ 0.79
CTDNEP1-201ENST00000318988 CSNK1G2-AS1Q8NCQ2 148 aa19.97■□□□□ 0.79
CTDNEP1-201ENST00000318988 IMMP2LQ96T52 175 aa19.97■□□□□ 0.79
CTDNEP1-201ENST00000318988 GFRA4Q9GZZ7 299 aa19.97■□□□□ 0.79
CTDNEP1-201ENST00000318988 CXorf65A6NEN9 183 aa19.97■□□□□ 0.79
CTDNEP1-201ENST00000318988 ASIPP42127 132 aa19.97■□□□□ 0.79
CTDNEP1-201ENST00000318988 TCL1AP56279 114 aa19.97■□□□□ 0.79
CTDNEP1-201ENST00000318988 DEFB121Q5J5C9 76 aa19.97■□□□□ 0.79
CTDNEP1-201ENST00000318988 TRGV11A0A075B6L2 103 aa19.96■□□□□ 0.79
CTDNEP1-201ENST00000318988 FAM231BA6NCW3 169 aa19.96■□□□□ 0.79
CTDNEP1-201ENST00000318988 K7EIL1 84 aa19.96■□□□□ 0.79
CTDNEP1-201ENST00000318988 CXCL1P09341 107 aa19.96■□□□□ 0.79
CTDNEP1-201ENST00000318988 LINC00467Q9BRT7 94 aa19.96■□□□□ 0.79
CTDNEP1-201ENST00000318988 SMIM27A0A1W2PRY6 76 aa19.95■□□□□ 0.78
CTDNEP1-201ENST00000318988 GNRH2O43555 120 aa19.95■□□□□ 0.78
CTDNEP1-201ENST00000318988 SCO1O75880 301 aa19.95■□□□□ 0.78
CTDNEP1-201ENST00000318988 TYMSP04818 313 aa19.95■□□□□ 0.78
CTDNEP1-201ENST00000318988 TMEM88Q6PEY1 159 aa19.95■□□□□ 0.78
CTDNEP1-201ENST00000318988 NEU1Q99519 415 aa19.95■□□□□ 0.78
CTDNEP1-201ENST00000318988 TPPP3Q9BW30 176 aa19.95■□□□□ 0.78
CTDNEP1-201ENST00000318988 NAT8BQ9UHF3 227 aa19.95■□□□□ 0.78
CTDNEP1-201ENST00000318988 A0A1W2PPQ1 181 aa19.94■□□□□ 0.78
CTDNEP1-201ENST00000318988 URGCP-MRPS24S4R325 110 aa19.94■□□□□ 0.78
CTDNEP1-201ENST00000318988 DNHD1Q96M86 4753 aa19.94■□□□□ 0.78
CTDNEP1-201ENST00000318988 HIGD1CA8MV81 97 aa19.93■□□□□ 0.78
CTDNEP1-201ENST00000318988 DEFB135Q30KP9 77 aa19.93■□□□□ 0.78
CTDNEP1-201ENST00000318988 CBLN2Q8IUK8 224 aa19.93■□□□□ 0.78
CTDNEP1-201ENST00000318988 FER1L6-AS1Q8NA97 138 aa19.93■□□□□ 0.78
CTDNEP1-201ENST00000318988 RCHY1Q96PM5 261 aa19.93■□□□□ 0.78
CTDNEP1-201ENST00000318988 TP53TG3Q9ULZ0 132 aa19.93■□□□□ 0.78
CTDNEP1-201ENST00000318988 NOTCH1P46531 2555 aa19.93■□□□□ 0.78
CTDNEP1-201ENST00000318988 FAM3BP58499 235 aaPredicted RBP19.92■□□□□ 0.78
CTDNEP1-201ENST00000318988 ZNF705AQ6ZN79 300 aaPredicted RBP19.92■□□□□ 0.78
CTDNEP1-201ENST00000318988 Q6ZWC4 215 aa19.92■□□□□ 0.78
CTDNEP1-201ENST00000318988 GTSF1Q8WW33 167 aa19.92■□□□□ 0.78
CTDNEP1-201ENST00000318988 TIMM8BQ9Y5J9 83 aaPredicted RBP19.92■□□□□ 0.78
CTDNEP1-201ENST00000318988 DNAH3Q8TD57 4116 aa19.92■□□□□ 0.78
CTDNEP1-201ENST00000318988 BORCS7Q96B45 105 aa19.91■□□□□ 0.78
CTDNEP1-201ENST00000318988 PGLYRP4Q96LB8 373 aa19.91■□□□□ 0.78
CTDNEP1-201ENST00000318988 H3BVH4 76 aa19.9■□□□□ 0.78
CTDNEP1-201ENST00000318988 RRN3P1Q2M238 152 aa19.9■□□□□ 0.78
CTDNEP1-201ENST00000318988 DNLZQ5SXM8 178 aa19.9■□□□□ 0.78
CTDNEP1-201ENST00000318988 IGHV3-16A0A0C4DH30 117 aa19.89■□□□□ 0.77
CTDNEP1-201ENST00000318988 FOXA3P55318 350 aaPredicted RBP19.89■□□□□ 0.77
CTDNEP1-201ENST00000318988 ZNF575Q86XF7 245 aa19.89■□□□□ 0.77
CTDNEP1-201ENST00000318988 NUP35Q8NFH5 326 aa19.89■□□□□ 0.77
CTDNEP1-201ENST00000318988 F2Z2F3 143 aa19.88■□□□□ 0.77
CTDNEP1-201ENST00000318988 PRM2P04554 102 aa19.88■□□□□ 0.77
CTDNEP1-201ENST00000318988 ARMS2P0C7Q2 107 aa19.88■□□□□ 0.77
CTDNEP1-201ENST00000318988 IGLC6P0CF74 106 aa19.88■□□□□ 0.77
CTDNEP1-201ENST00000318988 ZNF415Q09FC8 603 aa19.88■□□□□ 0.77
CTDNEP1-201ENST00000318988 LYZL1Q6UWQ5 148 aa19.88■□□□□ 0.77
CTDNEP1-201ENST00000318988 NBEAL1Q6ZS30 2694 aa19.88■□□□□ 0.77
CTDNEP1-201ENST00000318988 MED14OSP0DP75 135 aa19.87■□□□□ 0.77
CTDNEP1-201ENST00000318988 RNF183Q96D59 192 aa19.87■□□□□ 0.77
CTDNEP1-201ENST00000318988 BTF3L4Q96K17 158 aa19.87■□□□□ 0.77
CTDNEP1-201ENST00000318988 MDFICQ9P1T7 246 aa19.87■□□□□ 0.77
CTDNEP1-201ENST00000318988 TRAV9-1A0A075B6T8 112 aa19.86■□□□□ 0.77
CTDNEP1-201ENST00000318988 SMIM9A6NGZ8 99 aa19.86■□□□□ 0.77
CTDNEP1-201ENST00000318988 SPRY2O43597 315 aa19.86■□□□□ 0.77
CTDNEP1-201ENST00000318988 PHLDA3Q9Y5J5 127 aa19.86■□□□□ 0.77
CTDNEP1-201ENST00000318988 OR5AL1P0C617 328 aa19.86■□□□□ 0.77
CTDNEP1-201ENST00000318988 RNASE3P12724 160 aaKnown RBP19.86■□□□□ 0.77
CTDNEP1-201ENST00000318988 ZNF493Q6ZR52 646 aa19.86■□□□□ 0.77
CTDNEP1-201ENST00000318988 OR11H2Q8NH07 326 aa19.86■□□□□ 0.77
CTDNEP1-201ENST00000318988 MRAPQ8TCY5 172 aa19.86■□□□□ 0.77
CTDNEP1-201ENST00000318988 TMEM263Q8WUH6 116 aaKnown RBP19.86■□□□□ 0.77
CTDNEP1-201ENST00000318988 C16orf74Q96GX8 76 aa19.86■□□□□ 0.77
CTDNEP1-201ENST00000318988 SPINK4O60575 86 aa19.85■□□□□ 0.77
CTDNEP1-201ENST00000318988 AZU1P20160 251 aa19.85■□□□□ 0.77
CTDNEP1-201ENST00000318988 CTRLP40313 264 aa19.85■□□□□ 0.77
CTDNEP1-201ENST00000318988 SNAI2O43623 268 aa19.84■□□□□ 0.77
CTDNEP1-201ENST00000318988 ELOBQ15370 118 aa19.84■□□□□ 0.77
CTDNEP1-201ENST00000318988 SSBP4Q9BWG4 385 aaPredicted RBP19.84■□□□□ 0.77
CTDNEP1-201ENST00000318988 GSN-AS1Q9NRJ2 163 aa19.84■□□□□ 0.77
CTDNEP1-201ENST00000318988 TP53TG1Q9Y2A0 90 aa19.84■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 129.3 ms