RNA–Protein interactions for RNA: ENST00000309241.9

PPARGC1B-201, Transcript of PPARG coactivator 1 beta, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PPARGC1B, Length 10,568 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPARGC1B-201ENST00000309241 SCRT2Q9NQ03 307 aa6.73□□□□□ -1.33
PPARGC1B-201ENST00000309241 ZNF625Q96I27 306 aaPredicted RBP6.73□□□□□ -1.33
PPARGC1B-201ENST00000309241 DAZ1Q9NQZ3 744 aaKnown RBP6.73□□□□□ -1.33
PPARGC1B-201ENST00000309241 IGHV1-18A0A0C4DH31 117 aa6.73□□□□□ -1.33
PPARGC1B-201ENST00000309241 HERVK_113P63121 156 aa6.73□□□□□ -1.33
PPARGC1B-201ENST00000309241 C5orf64Q2M2E5 130 aa6.73□□□□□ -1.33
PPARGC1B-201ENST00000309241 MBD3L4A6NDZ8 208 aaPredicted RBP6.73□□□□□ -1.33
PPARGC1B-201ENST00000309241 MBD3L3A6NE82 208 aaPredicted RBP6.73□□□□□ -1.33
PPARGC1B-201ENST00000309241 MBD3L5A6NJ08 208 aaPredicted RBP6.73□□□□□ -1.33
PPARGC1B-201ENST00000309241 Q0VFX4 171 aa6.73□□□□□ -1.33
PPARGC1B-201ENST00000309241 MBD3L2Q8NHZ7 208 aaPredicted RBP6.73□□□□□ -1.33
PPARGC1B-201ENST00000309241 A0A0G2JNJ9 132 aa6.73□□□□□ -1.33
PPARGC1B-201ENST00000309241 FOXG1P55316 489 aaPredicted RBP6.73□□□□□ -1.33
PPARGC1B-201ENST00000309241 FOXF2Q12947 444 aa6.73□□□□□ -1.33
PPARGC1B-201ENST00000309241 WBP1Q96G27 269 aa6.73□□□□□ -1.33
PPARGC1B-201ENST00000309241 CYYR1Q96J86 154 aa6.73□□□□□ -1.33
PPARGC1B-201ENST00000309241 Q9UFV3 132 aa6.73□□□□□ -1.33
PPARGC1B-201ENST00000309241 MSMBP08118 114 aa6.72□□□□□ -1.33
PPARGC1B-201ENST00000309241 LINC01619G3V211 115 aa6.72□□□□□ -1.33
PPARGC1B-201ENST00000309241 FOXI1Q12951 378 aa6.72□□□□□ -1.33
PPARGC1B-201ENST00000309241 BRK1Q8WUW1 75 aa6.72□□□□□ -1.33
PPARGC1B-201ENST00000309241 H3BUA1 57 aa6.72□□□□□ -1.33
PPARGC1B-201ENST00000309241 NUP210LQ5VU65 1888 aa6.72□□□□□ -1.33
PPARGC1B-201ENST00000309241 NUPR1O60356 82 aa6.72□□□□□ -1.33
PPARGC1B-201ENST00000309241 TMEM14BQ9NUH8 114 aa6.72□□□□□ -1.33
PPARGC1B-201ENST00000309241 IGHV1-8P0DP01 117 aa6.72□□□□□ -1.33
PPARGC1B-201ENST00000309241 SHANK2-AS3Q9BTD1 123 aa6.72□□□□□ -1.33
PPARGC1B-201ENST00000309241 PRB4P10163 310 aaPredicted RBP6.72□□□□□ -1.33
PPARGC1B-201ENST00000309241 SAA4P35542 130 aa6.72□□□□□ -1.33
PPARGC1B-201ENST00000309241 TMEM178BH3BS89 294 aa6.71□□□□□ -1.33
PPARGC1B-201ENST00000309241 WFDC2Q14508 124 aa6.71□□□□□ -1.33
PPARGC1B-201ENST00000309241 BPESC1Q9GZL8 116 aa6.71□□□□□ -1.33
PPARGC1B-201ENST00000309241 LIME1Q9H400 295 aa6.71□□□□□ -1.33
PPARGC1B-201ENST00000309241 XCL2Q9UBD3 114 aa6.71□□□□□ -1.33
PPARGC1B-201ENST00000309241 TRAV12-1A0A0B4J245 112 aa6.71□□□□□ -1.33
PPARGC1B-201ENST00000309241 SPATA12Q7Z6I5 190 aa6.71□□□□□ -1.33
PPARGC1B-201ENST00000309241 MRPL55Q7Z7F7 128 aaKnown RBP6.71□□□□□ -1.33
PPARGC1B-201ENST00000309241 PCNX3Q9H6A9 2034 aa6.71□□□□□ -1.33
PPARGC1B-201ENST00000309241 TRBV25-1A0A075B6N4 114 aa6.71□□□□□ -1.33
PPARGC1B-201ENST00000309241 M0QXV9 152 aa6.71□□□□□ -1.33
PPARGC1B-201ENST00000309241 C12orf74Q32Q52 190 aa6.71□□□□□ -1.33
PPARGC1B-201ENST00000309241 PRIMA1Q86XR5 153 aa6.71□□□□□ -1.33
PPARGC1B-201ENST00000309241 DSCR8Q96T75 97 aa6.71□□□□□ -1.33
PPARGC1B-201ENST00000309241 KNCNA6PVL3 124 aa6.71□□□□□ -1.34
PPARGC1B-201ENST00000309241 I3L3M4 83 aa6.71□□□□□ -1.34
PPARGC1B-201ENST00000309241 PIFOQ8TCI5 191 aa6.71□□□□□ -1.34
PPARGC1B-201ENST00000309241 DEFB104AQ8WTQ1 72 aa6.71□□□□□ -1.34
PPARGC1B-201ENST00000309241 TMEM158Q8WZ71 300 aa6.71□□□□□ -1.34
PPARGC1B-201ENST00000309241 A0A087WWL8 130 aa6.71□□□□□ -1.34
PPARGC1B-201ENST00000309241 IGHV1-3A0A0C4DH29 117 aa6.71□□□□□ -1.34
PPARGC1B-201ENST00000309241 MORN5Q5VZ52 161 aa6.71□□□□□ -1.34
PPARGC1B-201ENST00000309241 V9GYV3 84 aa6.71□□□□□ -1.34
PPARGC1B-201ENST00000309241 A0A0U1RQV1 116 aa6.71□□□□□ -1.34
PPARGC1B-201ENST00000309241 CLPSL1A2RUU4 121 aa6.71□□□□□ -1.34
PPARGC1B-201ENST00000309241 LMO1P25800 156 aa6.71□□□□□ -1.34
PPARGC1B-201ENST00000309241 ANKRD11Q6UB99 2663 aaPredicted RBP6.71□□□□□ -1.34
PPARGC1B-201ENST00000309241 NTN3O00634 580 aaPredicted RBP6.71□□□□□ -1.34
PPARGC1B-201ENST00000309241 CD59P13987 128 aa6.71□□□□□ -1.34
PPARGC1B-201ENST00000309241 FOXI2Q6ZQN5 318 aa6.71□□□□□ -1.34
PPARGC1B-201ENST00000309241 TRAV25A0A0B4J276 109 aa6.71□□□□□ -1.34
PPARGC1B-201ENST00000309241 TRBV6-1A0A0K0K1D8 114 aa6.71□□□□□ -1.34
PPARGC1B-201ENST00000309241 SMKR1H3BMG3 65 aa6.7□□□□□ -1.34
PPARGC1B-201ENST00000309241 C4orf48Q5BLP8 95 aa6.7□□□□□ -1.34
PPARGC1B-201ENST00000309241 LINC00311Q8N616 119 aa6.7□□□□□ -1.34
PPARGC1B-201ENST00000309241 FLG2Q5D862 2391 aaPredicted RBP6.7□□□□□ -1.34
PPARGC1B-201ENST00000309241 ATG2AQ2TAZ0 1938 aa6.7□□□□□ -1.34
PPARGC1B-201ENST00000309241 TFF1P04155 84 aa6.7□□□□□ -1.34
PPARGC1B-201ENST00000309241 TMEM200BQ69YZ2 307 aa6.7□□□□□ -1.34
PPARGC1B-201ENST00000309241 LYZL1Q6UWQ5 148 aa6.7□□□□□ -1.34
PPARGC1B-201ENST00000309241 PCP2Q8IVA1 136 aa6.7□□□□□ -1.34
PPARGC1B-201ENST00000309241 PMS2P5A8MQ11 134 aa6.7□□□□□ -1.34
PPARGC1B-201ENST00000309241 C14orf178Q8N769 122 aaPredicted RBP6.7□□□□□ -1.34
PPARGC1B-201ENST00000309241 RHPN1-AS1Q9BWJ2 59 aa6.7□□□□□ -1.34
PPARGC1B-201ENST00000309241 EXOC3-AS1Q8N2X6 119 aa6.69□□□□□ -1.34
PPARGC1B-201ENST00000309241 H0YJW9 148 aa6.69□□□□□ -1.34
PPARGC1B-201ENST00000309241 DEFB131AP59861 70 aa6.69□□□□□ -1.34
PPARGC1B-201ENST00000309241 ZNF726P1Q15940 193 aa6.69□□□□□ -1.34
PPARGC1B-201ENST00000309241 SMIM2Q9BVW6 85 aa6.69□□□□□ -1.34
PPARGC1B-201ENST00000309241 RS1O15537 224 aa6.69□□□□□ -1.34
PPARGC1B-201ENST00000309241 CFHR2P36980 270 aa6.69□□□□□ -1.34
PPARGC1B-201ENST00000309241 MDS2Q8NDY4 140 aa6.69□□□□□ -1.34
PPARGC1B-201ENST00000309241 NTN5Q8WTR8 489 aaPredicted RBP6.69□□□□□ -1.34
PPARGC1B-201ENST00000309241 IGKV1-9A0A0C4DH69 117 aa6.69□□□□□ -1.34
PPARGC1B-201ENST00000309241 RUSC1-AS1Q66K80 236 aa6.69□□□□□ -1.34
PPARGC1B-201ENST00000309241 EFNA2O43921 213 aa6.69□□□□□ -1.34
PPARGC1B-201ENST00000309241 CRLF1O75462 422 aa6.69□□□□□ -1.34
PPARGC1B-201ENST00000309241 MRPS36P82909 103 aaKnown RBP6.69□□□□□ -1.34
PPARGC1B-201ENST00000309241 FAM110AQ9BQ89 295 aa6.69□□□□□ -1.34
PPARGC1B-201ENST00000309241 LYPD3O95274 346 aa6.68□□□□□ -1.34
PPARGC1B-201ENST00000309241 MED14OSP0DP75 135 aa6.68□□□□□ -1.34
PPARGC1B-201ENST00000309241 CXCL5P42830 114 aa6.68□□□□□ -1.34
PPARGC1B-201ENST00000309241 ZNF837Q96EG3 531 aaPredicted RBP6.68□□□□□ -1.34
PPARGC1B-201ENST00000309241 K7EM74 188 aa6.68□□□□□ -1.34
PPARGC1B-201ENST00000309241 CR1LQ2VPA4 569 aa6.68□□□□□ -1.34
PPARGC1B-201ENST00000309241 LTBP1Q14766 1721 aa6.68□□□□□ -1.34
PPARGC1B-201ENST00000309241 Q8TAT8 98 aa6.68□□□□□ -1.34
PPARGC1B-201ENST00000309241 OVOL3O00110 214 aa6.68□□□□□ -1.34
PPARGC1B-201ENST00000309241 IGKV2D-24A0A075B6R9 120 aa6.68□□□□□ -1.34
PPARGC1B-201ENST00000309241 A0A1B0GX51 115 aa6.68□□□□□ -1.34
PPARGC1B-201ENST00000309241 LY6HO94772 140 aa6.68□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 112.8 ms