RNA–Protein interactions for RNA: ENST00000304494.9

CDKN2A-201, Transcript of cyclin dependent kinase inhibitor 2A, humanhuman

TSL 1 (best) BASIC

Gene CDKN2A, Length 1,218 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN2A-201ENST00000304494 ICOSQ9Y6W8 199 aa18.31■□□□□ 0.52
CDKN2A-201ENST00000304494 IGHV3-16A0A0C4DH30 117 aa18.3■□□□□ 0.52
CDKN2A-201ENST00000304494 SMLR1H3BR10 107 aa18.3■□□□□ 0.52
CDKN2A-201ENST00000304494 GNRH2O43555 120 aa18.3■□□□□ 0.52
CDKN2A-201ENST00000304494 FLI1Q01543 452 aaPredicted RBP18.3■□□□□ 0.52
CDKN2A-201ENST00000304494 ZNF345Q14585 488 aa18.3■□□□□ 0.52
CDKN2A-201ENST00000304494 TRGV4A0A0C4DH28 118 aa18.29■□□□□ 0.52
CDKN2A-201ENST00000304494 IGLV2-11P01706 119 aa18.29■□□□□ 0.52
CDKN2A-201ENST00000304494 TYMSP04818 313 aa18.29■□□□□ 0.52
CDKN2A-201ENST00000304494 CRYBA4P53673 196 aa18.29■□□□□ 0.52
CDKN2A-201ENST00000304494 FHL2Q14192 279 aa18.29■□□□□ 0.52
CDKN2A-201ENST00000304494 NKX6-2Q9C056 277 aaPredicted RBP18.29■□□□□ 0.52
CDKN2A-201ENST00000304494 M0R2P5 195 aa18.28■□□□□ 0.52
CDKN2A-201ENST00000304494 SMUG1Q53HV7 270 aa18.28■□□□□ 0.52
CDKN2A-201ENST00000304494 TTC32Q5I0X7 151 aa18.28■□□□□ 0.52
CDKN2A-201ENST00000304494 SAPCD1Q5SSQ6 148 aa18.28■□□□□ 0.52
CDKN2A-201ENST00000304494 PRNTQ86SH4 94 aa18.28■□□□□ 0.52
CDKN2A-201ENST00000304494 C8orf49Q96NF6 230 aa18.28■□□□□ 0.52
CDKN2A-201ENST00000304494 GCGP01275 180 aa18.27■□□□□ 0.52
CDKN2A-201ENST00000304494 IFNA7P01567 189 aa18.27■□□□□ 0.52
CDKN2A-201ENST00000304494 PFN1P07737 140 aaKnown RBP18.27■□□□□ 0.52
CDKN2A-201ENST00000304494 FGF8P55075 233 aaPredicted RBP18.27■□□□□ 0.52
CDKN2A-201ENST00000304494 C6orf223Q8N319 242 aa18.27■□□□□ 0.52
CDKN2A-201ENST00000304494 KCNRGQ8N5I3 272 aa18.27■□□□□ 0.52
CDKN2A-201ENST00000304494 MUC4Q99102 2169 aa18.27■□□□□ 0.51
CDKN2A-201ENST00000304494 PPT1P50897 306 aa18.26■□□□□ 0.51
CDKN2A-201ENST00000304494 UBE2G2P60604 165 aa18.26■□□□□ 0.51
CDKN2A-201ENST00000304494 TRAV4A0A0B4J268 109 aa18.25■□□□□ 0.51
CDKN2A-201ENST00000304494 MAP1LC3B2A6NCE7 125 aa18.25■□□□□ 0.51
CDKN2A-201ENST00000304494 HMSDA8MTL9 139 aa18.25■□□□□ 0.51
CDKN2A-201ENST00000304494 SFTA3P0C7M3 94 aa18.25■□□□□ 0.51
CDKN2A-201ENST00000304494 ZNF80P51504 273 aaPredicted RBP18.25■□□□□ 0.51
CDKN2A-201ENST00000304494 ZNF479Q96JC4 524 aa18.25■□□□□ 0.51
CDKN2A-201ENST00000304494 MAP1LC3BQ9GZQ8 125 aa18.25■□□□□ 0.51
CDKN2A-201ENST00000304494 FAM74A7A6NL05 159 aa18.24■□□□□ 0.51
CDKN2A-201ENST00000304494 MRPL23Q16540 153 aaKnown RBP18.24■□□□□ 0.51
CDKN2A-201ENST00000304494 OR4C5Q8NGB2 326 aa18.24■□□□□ 0.51
CDKN2A-201ENST00000304494 STOML3Q8TAV4 291 aa18.24■□□□□ 0.51
CDKN2A-201ENST00000304494 HIST1H2BAQ96A08 127 aa18.24■□□□□ 0.51
CDKN2A-201ENST00000304494 A0A0D9SG52 128 aa18.23■□□□□ 0.51
CDKN2A-201ENST00000304494 A0A1W2PPQ1 181 aa18.23■□□□□ 0.51
CDKN2A-201ENST00000304494 PKHD1P08F94 4074 aa18.23■□□□□ 0.51
CDKN2A-201ENST00000304494 PKD1P98161 4303 aa18.23■□□□□ 0.51
CDKN2A-201ENST00000304494 PEX7O00628 323 aa18.22■□□□□ 0.51
CDKN2A-201ENST00000304494 LINC00479Q96M42 142 aa18.22■□□□□ 0.51
CDKN2A-201ENST00000304494 ORM1P02763 201 aa18.21■□□□□ 0.51
CDKN2A-201ENST00000304494 OR11H4Q8NGC9 324 aa18.21■□□□□ 0.51
CDKN2A-201ENST00000304494 PCNPQ8WW12 178 aaKnown RBP18.21■□□□□ 0.51
CDKN2A-201ENST00000304494 C11orf21Q9P2W6 132 aa18.21■□□□□ 0.51
CDKN2A-201ENST00000304494 ARL2-SNX15V9GYD0 113 aa18.21■□□□□ 0.51
CDKN2A-201ENST00000304494 TRAV34A0A0B4J273 112 aa18.2■□□□□ 0.5
CDKN2A-201ENST00000304494 KANTRA0A1W2PQU2 76 aa18.2■□□□□ 0.5
CDKN2A-201ENST00000304494 SEC11BP0C7V7 166 aa18.2■□□□□ 0.5
CDKN2A-201ENST00000304494 NEGR1Q7Z3B1 354 aa18.2■□□□□ 0.5
CDKN2A-201ENST00000304494 UMAD1C9J7I0 102 aa18.19■□□□□ 0.5
CDKN2A-201ENST00000304494 TCEAL7Q9BRU2 100 aa18.19■□□□□ 0.5
CDKN2A-201ENST00000304494 ZNF471Q9BX82 626 aaPredicted RBP18.19■□□□□ 0.5
CDKN2A-201ENST00000304494 C9JCJ5 164 aa18.18■□□□□ 0.5
CDKN2A-201ENST00000304494 K7EQD1 137 aa18.18■□□□□ 0.5
CDKN2A-201ENST00000304494 BCL2L11O43521 198 aa18.18■□□□□ 0.5
CDKN2A-201ENST00000304494 BTF3P20290 206 aaKnown RBP18.18■□□□□ 0.5
CDKN2A-201ENST00000304494 SRIP30626 198 aa18.18■□□□□ 0.5
CDKN2A-201ENST00000304494 ZNF876PQ49A33 203 aa18.18■□□□□ 0.5
CDKN2A-201ENST00000304494 Q86TA4 180 aa18.18■□□□□ 0.5
CDKN2A-201ENST00000304494 SIVA1O15304 175 aa18.17■□□□□ 0.5
CDKN2A-201ENST00000304494 GYPEP15421 78 aa18.17■□□□□ 0.5
CDKN2A-201ENST00000304494 FHITP49789 147 aa18.17■□□□□ 0.5
CDKN2A-201ENST00000304494 EIF5AP63241 154 aaKnown RBP18.17■□□□□ 0.5
CDKN2A-201ENST00000304494 LYPD5Q6UWN5 251 aa18.17■□□□□ 0.5
CDKN2A-201ENST00000304494 KRTAP1-5Q9BYS1 174 aa18.17■□□□□ 0.5
CDKN2A-201ENST00000304494 FABP5P3A8MUU1 101 aa18.16■□□□□ 0.5
CDKN2A-201ENST00000304494 CIDEAO60543 219 aa18.16■□□□□ 0.5
CDKN2A-201ENST00000304494 NXPH4O95158 308 aa18.16■□□□□ 0.5
CDKN2A-201ENST00000304494 TNP2Q05952 138 aa18.16■□□□□ 0.5
CDKN2A-201ENST00000304494 C9orf85Q96MD7 179 aa18.16■□□□□ 0.5
CDKN2A-201ENST00000304494 HERC2O95714 4834 aa18.16■□□□□ 0.5
CDKN2A-201ENST00000304494 CST9LP1Q5W188 147 aa18.15■□□□□ 0.5
CDKN2A-201ENST00000304494 PTH2Q96A98 100 aa18.15■□□□□ 0.5
CDKN2A-201ENST00000304494 FMC1Q96HJ9 113 aa18.15■□□□□ 0.5
CDKN2A-201ENST00000304494 TXNDC17Q9BRA2 123 aa18.15■□□□□ 0.5
CDKN2A-201ENST00000304494 ZFP30Q9Y2G7 519 aa18.15■□□□□ 0.5
CDKN2A-201ENST00000304494 UBE2G1P62253 170 aa18.14■□□□□ 0.49
CDKN2A-201ENST00000304494 DPPA3Q6W0C5 159 aa18.14■□□□□ 0.49
CDKN2A-201ENST00000304494 FAM213BQ8TBF2 198 aa18.14■□□□□ 0.49
CDKN2A-201ENST00000304494 PFDN1O60925 122 aa18.13■□□□□ 0.49
CDKN2A-201ENST00000304494 SFT2D1Q8WV19 159 aa18.13■□□□□ 0.49
CDKN2A-201ENST00000304494 MBD3L1Q8WWY6 194 aa18.13■□□□□ 0.49
CDKN2A-201ENST00000304494 RNASE3P12724 160 aaKnown RBP18.12■□□□□ 0.49
CDKN2A-201ENST00000304494 S100A4P26447 101 aaKnown RBP18.12■□□□□ 0.49
CDKN2A-201ENST00000304494 SH2D6Q7Z4S9 175 aa18.12■□□□□ 0.49
CDKN2A-201ENST00000304494 DNAH11Q96DT5 4516 aa18.11■□□□□ 0.49
CDKN2A-201ENST00000304494 KIAA1109Q2LD37 5005 aa18.11■□□□□ 0.49
CDKN2A-201ENST00000304494 IGKV3D-20A0A0C4DH25 116 aa18.11■□□□□ 0.49
CDKN2A-201ENST00000304494 TRBV6-1A0A0K0K1D8 114 aa18.11■□□□□ 0.49
CDKN2A-201ENST00000304494 RS1O15537 224 aa18.11■□□□□ 0.49
CDKN2A-201ENST00000304494 GATA1P15976 413 aaPredicted RBP18.11■□□□□ 0.49
CDKN2A-201ENST00000304494 CFAP126Q5VTH2 177 aa18.11■□□□□ 0.49
CDKN2A-201ENST00000304494 TMUB2Q71RG4 321 aa18.11■□□□□ 0.49
CDKN2A-201ENST00000304494 COX8CQ7Z4L0 72 aa18.11■□□□□ 0.49
CDKN2A-201ENST00000304494 DYNC1H1Q14204 4646 aaKnown RBP18.11■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 141.2 ms