RNA–Protein interactions for RNA: ENST00000296861.2

TNFRSF21-201, Transcript of TNF receptor superfamily member 21, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFRSF21, Length 3,595 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF21-201ENST00000296861 OR11H1Q8NG94 326 aa10.33□□□□□ -0.76
TNFRSF21-201ENST00000296861 OR11H2Q8NH07 326 aa10.33□□□□□ -0.76
TNFRSF21-201ENST00000296861 ZNF479Q96JC4 524 aa10.33□□□□□ -0.76
TNFRSF21-201ENST00000296861 LRRK2Q5S007 2527 aa10.33□□□□□ -0.76
TNFRSF21-201ENST00000296861 SCGB1C2P0DMR2 95 aa10.32□□□□□ -0.76
TNFRSF21-201ENST00000296861 A0A1B0GWB2 263 aa10.32□□□□□ -0.76
TNFRSF21-201ENST00000296861 G3V4G9 280 aa10.32□□□□□ -0.76
TNFRSF21-201ENST00000296861 LYPD1Q8N2G4 141 aa10.32□□□□□ -0.76
TNFRSF21-201ENST00000296861 NPFFR1Q9GZQ6 430 aa10.32□□□□□ -0.76
TNFRSF21-201ENST00000296861 TRBV25-1A0A075B6N4 114 aa10.32□□□□□ -0.76
TNFRSF21-201ENST00000296861 TTC9CQ8N5M4 171 aa10.32□□□□□ -0.76
TNFRSF21-201ENST00000296861 SAA4P35542 130 aa10.31□□□□□ -0.76
TNFRSF21-201ENST00000296861 IGLV11-55A0A075B6I3 123 aa10.31□□□□□ -0.76
TNFRSF21-201ENST00000296861 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP10.31□□□□□ -0.76
TNFRSF21-201ENST00000296861 WFDC2Q14508 124 aa10.31□□□□□ -0.76
TNFRSF21-201ENST00000296861 FGF6P10767 208 aa10.31□□□□□ -0.76
TNFRSF21-201ENST00000296861 ZFP36P26651 326 aaKnown RBP10.31□□□□□ -0.76
TNFRSF21-201ENST00000296861 NXT2Q9NPJ8 142 aaKnown RBP10.31□□□□□ -0.76
TNFRSF21-201ENST00000296861 MRPL16Q9NX20 251 aaKnown RBP10.31□□□□□ -0.76
TNFRSF21-201ENST00000296861 ZNF256Q9Y2P7 627 aaPredicted RBP10.31□□□□□ -0.76
TNFRSF21-201ENST00000296861 TSSC4Q9Y5U2 329 aaPredicted RBP10.3□□□□□ -0.76
TNFRSF21-201ENST00000296861 SMAD5-AS1Q9Y6J3 95 aa10.3□□□□□ -0.76
TNFRSF21-201ENST00000296861 NAV2Q8IVL1 2488 aa10.3□□□□□ -0.76
TNFRSF21-201ENST00000296861 JMJD1CQ15652 2540 aa10.3□□□□□ -0.76
TNFRSF21-201ENST00000296861 IGHV7-81A0A0B4J1V7 117 aa10.3□□□□□ -0.76
TNFRSF21-201ENST00000296861 LY6DQ14210 128 aa10.3□□□□□ -0.76
TNFRSF21-201ENST00000296861 TMEM95Q3KNT9 176 aa10.3□□□□□ -0.76
TNFRSF21-201ENST00000296861 IGF2-ASQ6U949 168 aa10.3□□□□□ -0.76
TNFRSF21-201ENST00000296861 RPL39LQ96EH5 51 aaKnown RBP10.3□□□□□ -0.76
TNFRSF21-201ENST00000296861 UTP20O75691 2785 aaKnown RBP10.3□□□□□ -0.76
TNFRSF21-201ENST00000296861 A0A087WWL8 130 aa10.3□□□□□ -0.76
TNFRSF21-201ENST00000296861 PRTN3P24158 256 aa10.3□□□□□ -0.76
TNFRSF21-201ENST00000296861 TMEM170BQ5T4T1 132 aa10.3□□□□□ -0.76
TNFRSF21-201ENST00000296861 SIGMAR1Q99720 223 aa10.3□□□□□ -0.76
TNFRSF21-201ENST00000296861 AZU1P20160 251 aa10.29□□□□□ -0.76
TNFRSF21-201ENST00000296861 PDE6HQ13956 83 aa10.29□□□□□ -0.76
TNFRSF21-201ENST00000296861 LAGE3Q14657 143 aa10.29□□□□□ -0.76
TNFRSF21-201ENST00000296861 PIP4P2Q8N4L2 257 aa10.29□□□□□ -0.76
TNFRSF21-201ENST00000296861 LINC00477Q96M19 166 aa10.29□□□□□ -0.76
TNFRSF21-201ENST00000296861 BEX4Q9NWD9 120 aaPredicted RBP10.29□□□□□ -0.76
TNFRSF21-201ENST00000296861 C11orf21Q9P2W6 132 aa10.29□□□□□ -0.76
TNFRSF21-201ENST00000296861 A6NJY4 79 aa10.29□□□□□ -0.76
TNFRSF21-201ENST00000296861 K7ENP7 123 aa10.29□□□□□ -0.76
TNFRSF21-201ENST00000296861 ODF1Q14990 250 aa10.29□□□□□ -0.76
TNFRSF21-201ENST00000296861 MAPKAPK5-AS1Q8N8E1 139 aa10.29□□□□□ -0.76
TNFRSF21-201ENST00000296861 BPESC1Q9GZL8 116 aa10.29□□□□□ -0.76
TNFRSF21-201ENST00000296861 FLNCQ14315 2725 aa10.28□□□□□ -0.76
TNFRSF21-201ENST00000296861 IGKV3D-20A0A0C4DH25 116 aa10.28□□□□□ -0.76
TNFRSF21-201ENST00000296861 WI2-2373I1.2A0A1W2PRP0 233 aa10.28□□□□□ -0.76
TNFRSF21-201ENST00000296861 ATP5G2Q06055 141 aa10.28□□□□□ -0.76
TNFRSF21-201ENST00000296861 C8orf86Q6ZUL3 223 aa10.28□□□□□ -0.76
TNFRSF21-201ENST00000296861 KLHL30-AS1Q8NEE0 82 aa10.28□□□□□ -0.76
TNFRSF21-201ENST00000296861 HRNRQ86YZ3 2850 aaPredicted RBP10.28□□□□□ -0.76
TNFRSF21-201ENST00000296861 PSMB2P49721 201 aa10.28□□□□□ -0.76
TNFRSF21-201ENST00000296861 UFSP1Q6NVU6 142 aa10.28□□□□□ -0.76
TNFRSF21-201ENST00000296861 OR10J6PQ8NGY7 276 aa10.28□□□□□ -0.76
TNFRSF21-201ENST00000296861 GNRH2O43555 120 aa10.27□□□□□ -0.76
TNFRSF21-201ENST00000296861 ATP5LO75964 103 aa10.27□□□□□ -0.76
TNFRSF21-201ENST00000296861 Q1RN00 199 aa10.27□□□□□ -0.76
TNFRSF21-201ENST00000296861 ZNF815PA8K554 130 aa10.27□□□□□ -0.77
TNFRSF21-201ENST00000296861 C8orf31Q8N9H6 132 aa10.27□□□□□ -0.77
TNFRSF21-201ENST00000296861 PKD1L2Q7Z442 2459 aa10.27□□□□□ -0.77
TNFRSF21-201ENST00000296861 TNFRSF13BO14836 293 aaPredicted RBP10.27□□□□□ -0.77
TNFRSF21-201ENST00000296861 EEF1AKMT3Q96AZ1 226 aa10.27□□□□□ -0.77
TNFRSF21-201ENST00000296861 VPS13CQ709C8 3753 aa10.26□□□□□ -0.77
TNFRSF21-201ENST00000296861 TRBV12-3P01733 135 aa10.26□□□□□ -0.77
TNFRSF21-201ENST00000296861 SRSF1Q07955 248 aaKnown RBP eCLIP10.26□□□□□ -0.77
TNFRSF21-201ENST00000296861 RNF185Q96GF1 192 aa10.26□□□□□ -0.77
TNFRSF21-201ENST00000296861 PGPEP1Q9NXJ5 209 aa10.26□□□□□ -0.77
TNFRSF21-201ENST00000296861 FN1P02751 2386 aaKnown RBP10.26□□□□□ -0.77
TNFRSF21-201ENST00000296861 MTORP42345 2549 aa10.25□□□□□ -0.77
TNFRSF21-201ENST00000296861 BUB3O43684 328 aa10.25□□□□□ -0.77
TNFRSF21-201ENST00000296861 HLA-DRB4P13762 266 aa10.25□□□□□ -0.77
TNFRSF21-201ENST00000296861 RNF5Q99942 180 aa10.25□□□□□ -0.77
TNFRSF21-201ENST00000296861 JPT2Q9H910 190 aa10.25□□□□□ -0.77
TNFRSF21-201ENST00000296861 HLA-DRB4X5D2U9 266 aa10.25□□□□□ -0.77
TNFRSF21-201ENST00000296861 F8W735 103 aaPredicted RBP10.25□□□□□ -0.77
TNFRSF21-201ENST00000296861 MRPS12O15235 138 aaKnown RBP10.25□□□□□ -0.77
TNFRSF21-201ENST00000296861 SIVA1O15304 175 aa10.25□□□□□ -0.77
TNFRSF21-201ENST00000296861 PAX8Q06710 450 aa10.25□□□□□ -0.77
TNFRSF21-201ENST00000296861 DPF1Q92782 380 aa10.25□□□□□ -0.77
TNFRSF21-201ENST00000296861 DUX5Q96PT3 197 aa10.25□□□□□ -0.77
TNFRSF21-201ENST00000296861 IGHV3-73A0A0B4J1V6 119 aa10.24□□□□□ -0.77
TNFRSF21-201ENST00000296861 SLC25A16P16260 332 aa10.24□□□□□ -0.77
TNFRSF21-201ENST00000296861 ZNF493Q6ZR52 646 aa10.24□□□□□ -0.77
TNFRSF21-201ENST00000296861 ZFHX3Q15911 3703 aa10.24□□□□□ -0.77
TNFRSF21-201ENST00000296861 GAGE13Q4V321 117 aa10.24□□□□□ -0.77
TNFRSF21-201ENST00000296861 SHISA2Q6UWI4 295 aa10.24□□□□□ -0.77
TNFRSF21-201ENST00000296861 Q8N9W7 124 aa10.24□□□□□ -0.77
TNFRSF21-201ENST00000296861 KHDC1LQ5JSQ8 128 aa10.24□□□□□ -0.77
TNFRSF21-201ENST00000296861 GAGE12HA6NDE8 117 aa10.23□□□□□ -0.77
TNFRSF21-201ENST00000296861 ASIPP42127 132 aa10.23□□□□□ -0.77
TNFRSF21-201ENST00000296861 ANXA2RQ3ZCQ2 193 aa10.23□□□□□ -0.77
TNFRSF21-201ENST00000296861 Q8N8P6 123 aa10.23□□□□□ -0.77
TNFRSF21-201ENST00000296861 TRAV12-3A0A0B4J271 114 aa10.23□□□□□ -0.77
TNFRSF21-201ENST00000296861 LINC01549A6NIU2 74 aa10.23□□□□□ -0.77
TNFRSF21-201ENST00000296861 LY6LH3BQJ8 138 aa10.23□□□□□ -0.77
TNFRSF21-201ENST00000296861 PRSS2P07478 247 aa10.23□□□□□ -0.77
TNFRSF21-201ENST00000296861 CD7P09564 240 aa10.23□□□□□ -0.77
TNFRSF21-201ENST00000296861 UNQ9165/PRO28630Q6UXU0 137 aa10.23□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 497.5 ms