RNA–Protein interactions for RNA: ENST00000279452.10

CD44-204, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 862 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-204ENST00000279452 BLOC1S1P78537 153 aa4.64□□□□□ -1.67
CD44-204ENST00000279452 IBA57Q5T440 356 aaKnown RBP4.64□□□□□ -1.67
CD44-204ENST00000279452 PRR27Q6MZM9 219 aa4.64□□□□□ -1.67
CD44-204ENST00000279452 TMEM88Q6PEY1 159 aa4.64□□□□□ -1.67
CD44-204ENST00000279452 Q6ZTI0 123 aa4.64□□□□□ -1.67
CD44-204ENST00000279452 UBE2DNLQ8IWF7 75 aa4.64□□□□□ -1.67
CD44-204ENST00000279452 KCNS1Q96KK3 526 aa4.64□□□□□ -1.67
CD44-204ENST00000279452 LINC00467Q9BRT7 94 aa4.64□□□□□ -1.67
CD44-204ENST00000279452 MDFICQ9P1T7 246 aa4.64□□□□□ -1.67
CD44-204ENST00000279452 TENM3Q9P273 2699 aa4.63□□□□□ -1.67
CD44-204ENST00000279452 TMSB15BA0A087X1C1 80 aa4.63□□□□□ -1.67
CD44-204ENST00000279452 TRAV1-1A0A0B4J248 108 aa4.63□□□□□ -1.67
CD44-204ENST00000279452 A0A0J9YY99 117 aa4.63□□□□□ -1.67
CD44-204ENST00000279452 GNRH2O43555 120 aa4.63□□□□□ -1.67
CD44-204ENST00000279452 NUDT3O95989 172 aa4.63□□□□□ -1.67
CD44-204ENST00000279452 BCL2P10415 239 aa4.63□□□□□ -1.67
CD44-204ENST00000279452 MGST1P10620 155 aaKnown RBP4.63□□□□□ -1.67
CD44-204ENST00000279452 S100A4P26447 101 aaKnown RBP4.63□□□□□ -1.67
CD44-204ENST00000279452 ZNF80P51504 273 aaPredicted RBP4.63□□□□□ -1.67
CD44-204ENST00000279452 CEBPGP53567 150 aa4.63□□□□□ -1.67
CD44-204ENST00000279452 TCTAP57738 103 aa4.63□□□□□ -1.67
CD44-204ENST00000279452 MEF2BQ02080 365 aaPredicted RBP4.63□□□□□ -1.67
CD44-204ENST00000279452 DAZ2Q13117 558 aaKnown RBP4.63□□□□□ -1.67
CD44-204ENST00000279452 BAGE2Q86Y30 109 aa4.63□□□□□ -1.67
CD44-204ENST00000279452 C11orf72Q8NBR9 251 aa4.63□□□□□ -1.67
CD44-204ENST00000279452 LINC00476Q8WZB0 136 aa4.63□□□□□ -1.67
CD44-204ENST00000279452 ZC2HC1AQ96GY0 325 aa4.63□□□□□ -1.67
CD44-204ENST00000279452 ZFP30Q9Y2G7 519 aa4.63□□□□□ -1.67
CD44-204ENST00000279452 COL7A1Q02388 2944 aa4.63□□□□□ -1.67
CD44-204ENST00000279452 IGHV3-16A0A0C4DH30 117 aa4.62□□□□□ -1.67
CD44-204ENST00000279452 FABP5P3A8MUU1 101 aa4.62□□□□□ -1.67
CD44-204ENST00000279452 B4DEV8 164 aa4.62□□□□□ -1.67
CD44-204ENST00000279452 C9JCJ5 164 aa4.62□□□□□ -1.67
CD44-204ENST00000279452 PDE6DO43924 150 aa4.62□□□□□ -1.67
CD44-204ENST00000279452 SH2D1AO60880 128 aa4.62□□□□□ -1.67
CD44-204ENST00000279452 LTAP01374 205 aa4.62□□□□□ -1.67
CD44-204ENST00000279452 S100A9P06702 114 aaKnown RBP4.62□□□□□ -1.67
CD44-204ENST00000279452 ASIPP42127 132 aa4.62□□□□□ -1.67
CD44-204ENST00000279452 RPL35P42766 123 aaKnown RBP4.62□□□□□ -1.67
CD44-204ENST00000279452 GNG4P50150 75 aa4.62□□□□□ -1.67
CD44-204ENST00000279452 FAM162BQ5T6X4 162 aa4.62□□□□□ -1.67
CD44-204ENST00000279452 SPXQ9BT56 116 aa4.62□□□□□ -1.67
CD44-204ENST00000279452 DERL1Q9BUN8 251 aa4.62□□□□□ -1.67
CD44-204ENST00000279452 MED9Q9NWA0 146 aa4.62□□□□□ -1.67
CD44-204ENST00000279452 VAX2Q9UIW0 290 aa4.62□□□□□ -1.67
CD44-204ENST00000279452 APLNQ9ULZ1 77 aa4.62□□□□□ -1.67
CD44-204ENST00000279452 TRAV26-1A0A087WT03 109 aa4.61□□□□□ -1.67
CD44-204ENST00000279452 TRGV4A0A0C4DH28 118 aa4.61□□□□□ -1.67
CD44-204ENST00000279452 GRIFINA4D1Z8 144 aa4.61□□□□□ -1.67
CD44-204ENST00000279452 H3BVH4 76 aa4.61□□□□□ -1.67
CD44-204ENST00000279452 M0R2P5 195 aa4.61□□□□□ -1.67
CD44-204ENST00000279452 SPINK4O60575 86 aa4.61□□□□□ -1.67
CD44-204ENST00000279452 P0DMU3 169 aa4.61□□□□□ -1.67
CD44-204ENST00000279452 FAM231AP0DMU4 169 aa4.61□□□□□ -1.67
CD44-204ENST00000279452 FAM231CP0DMU5 169 aa4.61□□□□□ -1.67
CD44-204ENST00000279452 TAGLN2P37802 199 aaKnown RBP4.61□□□□□ -1.67
CD44-204ENST00000279452 ZNF674Q2M3X9 581 aa4.61□□□□□ -1.67
CD44-204ENST00000279452 LGALS9BQ3B8N2 356 aa4.61□□□□□ -1.67
CD44-204ENST00000279452 TDRG1Q3Y452 100 aa4.61□□□□□ -1.67
CD44-204ENST00000279452 CENPWQ5EE01 88 aa4.61□□□□□ -1.67
CD44-204ENST00000279452 TOR2AQ5JU69 321 aa4.61□□□□□ -1.67
CD44-204ENST00000279452 LCE2CQ5TA81 110 aa4.61□□□□□ -1.67
CD44-204ENST00000279452 LINC00612Q8N6U2 182 aa4.61□□□□□ -1.67
CD44-204ENST00000279452 C15orf53Q8NAA6 179 aa4.61□□□□□ -1.67
CD44-204ENST00000279452 PCNPQ8WW12 178 aaKnown RBP4.61□□□□□ -1.67
CD44-204ENST00000279452 FAM210BQ96KR6 192 aa4.61□□□□□ -1.67
CD44-204ENST00000279452 TXNDC17Q9BRA2 123 aa4.61□□□□□ -1.67
CD44-204ENST00000279452 EIF5A2Q9GZV4 153 aaKnown RBP4.61□□□□□ -1.67
CD44-204ENST00000279452 C11orf21Q9P2W6 132 aa4.61□□□□□ -1.67
CD44-204ENST00000279452 STAB2Q8WWQ8 2551 aa4.6□□□□□ -1.67
CD44-204ENST00000279452 IGKV3D-20A0A0C4DH25 116 aa4.6□□□□□ -1.67
CD44-204ENST00000279452 TRBV6-1A0A0K0K1D8 114 aa4.6□□□□□ -1.67
CD44-204ENST00000279452 RAB19A4D1S5 217 aa4.6□□□□□ -1.67
CD44-204ENST00000279452 RBFOX3A6NFN3 312 aa4.6□□□□□ -1.67
CD44-204ENST00000279452 SFTA3P0C7M3 94 aa4.6□□□□□ -1.67
CD44-204ENST00000279452 HOXA5P20719 270 aa4.6□□□□□ -1.67
CD44-204ENST00000279452 ZNF876PQ49A33 203 aa4.6□□□□□ -1.67
CD44-204ENST00000279452 LGALS9CQ6DKI2 356 aa4.6□□□□□ -1.67
CD44-204ENST00000279452 OR4C5Q8NGB2 326 aa4.6□□□□□ -1.67
CD44-204ENST00000279452 C11orf52Q96A22 123 aa4.6□□□□□ -1.67
CD44-204ENST00000279452 DAZAP1Q96EP5 407 aaKnown RBP4.6□□□□□ -1.67
CD44-204ENST00000279452 NBEAL2Q6ZNJ1 2754 aa4.59□□□□□ -1.67
CD44-204ENST00000279452 IGHV3-73A0A0B4J1V6 119 aa4.59□□□□□ -1.67
CD44-204ENST00000279452 PGPEP1LA6NFU8 196 aa4.59□□□□□ -1.67
CD44-204ENST00000279452 M0R381 172 aa4.59□□□□□ -1.67
CD44-204ENST00000279452 PAX4O43316 350 aa4.59□□□□□ -1.67
CD44-204ENST00000279452 CRIP1P50238 77 aa4.59□□□□□ -1.67
CD44-204ENST00000279452 SSTP61278 116 aa4.59□□□□□ -1.67
CD44-204ENST00000279452 RPL19P84098 196 aaKnown RBP4.59□□□□□ -1.67
CD44-204ENST00000279452 LINC01559Q495D7 138 aa4.59□□□□□ -1.67
CD44-204ENST00000279452 TEX261Q6UWH6 196 aa4.59□□□□□ -1.67
CD44-204ENST00000279452 SYT8Q8NBV8 401 aa4.59□□□□□ -1.67
CD44-204ENST00000279452 ZNF479Q96JC4 524 aa4.59□□□□□ -1.67
CD44-204ENST00000279452 TPPP3Q9BW30 176 aa4.59□□□□□ -1.67
CD44-204ENST00000279452 PHLDA3Q9Y5J5 127 aa4.59□□□□□ -1.67
CD44-204ENST00000279452 IGLV2-18A0A075B6J9 118 aa4.58□□□□□ -1.68
CD44-204ENST00000279452 A0A096LPF7 62 aa4.58□□□□□ -1.68
CD44-204ENST00000279452 TRAV4A0A0B4J268 109 aa4.58□□□□□ -1.68
CD44-204ENST00000279452 KRBOX1C9JBD0 128 aa4.58□□□□□ -1.68
CD44-204ENST00000279452 ARMS2P0C7Q2 107 aa4.58□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 67.4 ms