RNA–Protein interactions for RNA: ENST00000273156.11

SEC22C-202, Transcript of SEC22 homolog C, vesicle trafficking protein, humanhuman

TSL 1 (best) BASIC

Gene SEC22C, Length 1,608 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC22C-202ENST00000273156 TRAV21A0A0B4J279 112 aa13.15□□□□□ -0.3
SEC22C-202ENST00000273156 SPINK4O60575 86 aa13.15□□□□□ -0.3
SEC22C-202ENST00000273156 TRGC2P03986 189 aa13.15□□□□□ -0.3
SEC22C-202ENST00000273156 TSPOP30536 169 aa13.15□□□□□ -0.3
SEC22C-202ENST00000273156 Q6AWC8 147 aa13.15□□□□□ -0.3
SEC22C-202ENST00000273156 NBEAL2Q6ZNJ1 2754 aa13.15□□□□□ -0.3
SEC22C-202ENST00000273156 TMSB15BA0A087X1C1 80 aa13.14□□□□□ -0.31
SEC22C-202ENST00000273156 C3orf84H3BNL1 204 aa13.14□□□□□ -0.31
SEC22C-202ENST00000273156 J3KRW8 73 aa13.14□□□□□ -0.31
SEC22C-202ENST00000273156 GZMBP10144 247 aa13.14□□□□□ -0.31
SEC22C-202ENST00000273156 LINC01559Q495D7 138 aa13.14□□□□□ -0.31
SEC22C-202ENST00000273156 RASL11AQ6T310 242 aa13.14□□□□□ -0.31
SEC22C-202ENST00000273156 ATP5L2Q7Z4Y8 100 aa13.14□□□□□ -0.31
SEC22C-202ENST00000273156 PGLYRP4Q96LB8 373 aa13.14□□□□□ -0.31
SEC22C-202ENST00000273156 RNASE4P34096 147 aaKnown RBP13.13□□□□□ -0.31
SEC22C-202ENST00000273156 MRPL54Q6P161 138 aaKnown RBP13.13□□□□□ -0.31
SEC22C-202ENST00000273156 WDR73Q6P4I2 378 aa13.13□□□□□ -0.31
SEC22C-202ENST00000273156 KNCNA6PVL3 124 aa13.13□□□□□ -0.31
SEC22C-202ENST00000273156 KLLNB2CW77 178 aa13.13□□□□□ -0.31
SEC22C-202ENST00000273156 IGKV3-20P01619 116 aa13.13□□□□□ -0.31
SEC22C-202ENST00000273156 HLA-DRB4P13762 266 aa13.13□□□□□ -0.31
SEC22C-202ENST00000273156 ACTL10Q5JWF8 245 aa13.13□□□□□ -0.31
SEC22C-202ENST00000273156 PRR9Q5T870 116 aa13.13□□□□□ -0.31
SEC22C-202ENST00000273156 TM2D3Q9BRN9 247 aa13.13□□□□□ -0.31
SEC22C-202ENST00000273156 GNB1LQ9BYB4 327 aa13.13□□□□□ -0.31
SEC22C-202ENST00000273156 TRAPPC1Q9Y5R8 145 aa13.13□□□□□ -0.31
SEC22C-202ENST00000273156 HLA-DRB4X5D2U9 266 aa13.13□□□□□ -0.31
SEC22C-202ENST00000273156 OR11H12B2RN74 326 aa13.12□□□□□ -0.31
SEC22C-202ENST00000273156 BORCS7Q96B45 105 aa13.12□□□□□ -0.31
SEC22C-202ENST00000273156 H3BMM0 161 aa13.11□□□□□ -0.31
SEC22C-202ENST00000273156 MT-ND6P03923 174 aa13.11□□□□□ -0.31
SEC22C-202ENST00000273156 CDKN1BP46527 198 aa13.11□□□□□ -0.31
SEC22C-202ENST00000273156 ZFP82Q8N141 532 aa13.11□□□□□ -0.31
SEC22C-202ENST00000273156 IGKV3D-20A0A0C4DH25 116 aa13.1□□□□□ -0.31
SEC22C-202ENST00000273156 SNURFLB1AK76 121 aa13.1□□□□□ -0.31
SEC22C-202ENST00000273156 RAB4BP61018 213 aa13.1□□□□□ -0.31
SEC22C-202ENST00000273156 FER1L6-AS1Q8NA97 138 aa13.1□□□□□ -0.31
SEC22C-202ENST00000273156 FRZBQ92765 325 aa13.1□□□□□ -0.31
SEC22C-202ENST00000273156 TPPP3Q9BW30 176 aa13.1□□□□□ -0.31
SEC22C-202ENST00000273156 A0A1B0GUT8 65 aa13.1□□□□□ -0.31
SEC22C-202ENST00000273156 C7orf71A4D174 169 aa13.1□□□□□ -0.31
SEC22C-202ENST00000273156 A8MTW9 85 aa13.1□□□□□ -0.31
SEC22C-202ENST00000273156 HBBP68871 147 aa13.1□□□□□ -0.31
SEC22C-202ENST00000273156 FABP9Q0Z7S8 132 aa13.1□□□□□ -0.31
SEC22C-202ENST00000273156 RIGQ13278 110 aa13.1□□□□□ -0.31
SEC22C-202ENST00000273156 ODF3L2Q3SX64 289 aa13.1□□□□□ -0.31
SEC22C-202ENST00000273156 SPATA25Q9BR10 227 aa13.1□□□□□ -0.31
SEC22C-202ENST00000273156 C11orf21Q9P2W6 132 aa13.1□□□□□ -0.31
SEC22C-202ENST00000273156 GRIFINA4D1Z8 144 aa13.09□□□□□ -0.31
SEC22C-202ENST00000273156 AMTNQ6UX39 209 aa13.09□□□□□ -0.31
SEC22C-202ENST00000273156 MUC7Q8TAX7 377 aa13.09□□□□□ -0.31
SEC22C-202ENST00000273156 FAM110AQ9BQ89 295 aa13.09□□□□□ -0.31
SEC22C-202ENST00000273156 NAGKQ9UJ70 344 aa13.09□□□□□ -0.31
SEC22C-202ENST00000273156 A0A1B0GW15 77 aa13.08□□□□□ -0.32
SEC22C-202ENST00000273156 A0A1B0GXF2 115 aa13.08□□□□□ -0.32
SEC22C-202ENST00000273156 HLA-DQA1P01909 254 aa13.08□□□□□ -0.32
SEC22C-202ENST00000273156 S100A8P05109 93 aa13.08□□□□□ -0.32
SEC22C-202ENST00000273156 CAMPP49913 170 aa13.08□□□□□ -0.32
SEC22C-202ENST00000273156 KIR3DS1Q14943 382 aa13.08□□□□□ -0.32
SEC22C-202ENST00000273156 ZNF124Q15973 351 aa13.08□□□□□ -0.32
SEC22C-202ENST00000273156 SPINK13Q1W4C9 94 aa13.08□□□□□ -0.32
SEC22C-202ENST00000273156 LYZL1Q6UWQ5 148 aa13.08□□□□□ -0.32
SEC22C-202ENST00000273156 TMEM136Q6ZRR5 245 aa13.08□□□□□ -0.32
SEC22C-202ENST00000273156 CLUHP3Q96NS8 147 aa13.08□□□□□ -0.32
SEC22C-202ENST00000273156 F2Z2F3 143 aa13.07□□□□□ -0.32
SEC22C-202ENST00000273156 M0R2Z0 102 aa13.07□□□□□ -0.32
SEC22C-202ENST00000273156 IGLC6P0CF74 106 aa13.07□□□□□ -0.32
SEC22C-202ENST00000273156 Q6ZQT7 251 aa13.07□□□□□ -0.32
SEC22C-202ENST00000273156 STHQ8IWL8 128 aa13.07□□□□□ -0.32
SEC22C-202ENST00000273156 MRPL18Q9H0U6 180 aaKnown RBP13.07□□□□□ -0.32
SEC22C-202ENST00000273156 TRAV12-3A0A0B4J271 114 aa13.06□□□□□ -0.32
SEC22C-202ENST00000273156 PHOX2AO14813 284 aa13.06□□□□□ -0.32
SEC22C-202ENST00000273156 S100A6P06703 90 aa13.06□□□□□ -0.32
SEC22C-202ENST00000273156 TRGC1P0CF51 173 aa13.06□□□□□ -0.32
SEC22C-202ENST00000273156 FAM159AQ6UWV7 190 aa13.06□□□□□ -0.32
SEC22C-202ENST00000273156 ZNF575Q86XF7 245 aa13.06□□□□□ -0.32
SEC22C-202ENST00000273156 KCNS1Q96KK3 526 aa13.06□□□□□ -0.32
SEC22C-202ENST00000273156 ARMS2P0C7Q2 107 aa13.06□□□□□ -0.32
SEC22C-202ENST00000273156 CTRLP40313 264 aa13.06□□□□□ -0.32
SEC22C-202ENST00000273156 ANXA2RQ3ZCQ2 193 aa13.06□□□□□ -0.32
SEC22C-202ENST00000273156 GFI1BQ5VTD9 330 aa13.06□□□□□ -0.32
SEC22C-202ENST00000273156 TRAV12-2A0A075B6T6 113 aa13.05□□□□□ -0.32
SEC22C-202ENST00000273156 HIST1H2BKO60814 126 aa13.05□□□□□ -0.32
SEC22C-202ENST00000273156 ZNF324O75467 553 aaPredicted RBP13.05□□□□□ -0.32
SEC22C-202ENST00000273156 HIST1H2BJP06899 126 aa13.05□□□□□ -0.32
SEC22C-202ENST00000273156 HIST1H2BOP23527 126 aa13.05□□□□□ -0.32
SEC22C-202ENST00000273156 HIST1H2BBP33778 126 aa13.05□□□□□ -0.32
SEC22C-202ENST00000273156 HIST1H2BDP58876 126 aa13.05□□□□□ -0.32
SEC22C-202ENST00000273156 HIST1H2BCP62807 126 aa13.05□□□□□ -0.32
SEC22C-202ENST00000273156 HIST2H2BEQ16778 126 aa13.05□□□□□ -0.32
SEC22C-202ENST00000273156 HIST2H2BFQ5QNW6 126 aaPredicted RBP13.05□□□□□ -0.32
SEC22C-202ENST00000273156 MUC21Q5SSG8 566 aa13.05□□□□□ -0.32
SEC22C-202ENST00000273156 HIST1H2BHQ93079 126 aa13.05□□□□□ -0.32
SEC22C-202ENST00000273156 HIST1H2BNQ99877 126 aa13.05□□□□□ -0.32
SEC22C-202ENST00000273156 HIST1H2BMQ99879 126 aa13.05□□□□□ -0.32
SEC22C-202ENST00000273156 APCSP02743 223 aa13.03□□□□□ -0.32
SEC22C-202ENST00000273156 AMBPP02760 352 aa13.03□□□□□ -0.32
SEC22C-202ENST00000273156 CD7P09564 240 aa13.03□□□□□ -0.32
SEC22C-202ENST00000273156 S100A4P26447 101 aaKnown RBP13.03□□□□□ -0.32
SEC22C-202ENST00000273156 ASIPP42127 132 aa13.03□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 126 ms