RNA–Protein interactions for RNA: ENST00000261980.2

VSX2-201, Transcript of visual system homeobox 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VSX2, Length 2,995 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSX2-201ENST00000261980 ZNF474Q6S9Z5 364 aaPredicted RBP12.78□□□□□ -0.36
VSX2-201ENST00000261980 HIF1ANQ9NWT6 349 aa12.78□□□□□ -0.36
VSX2-201ENST00000261980 CD40P25942 277 aa12.77□□□□□ -0.36
VSX2-201ENST00000261980 Q8N8P6 123 aa12.77□□□□□ -0.36
VSX2-201ENST00000261980 C11orf21Q9P2W6 132 aa12.77□□□□□ -0.37
VSX2-201ENST00000261980 MAP1AP78559 2803 aaPredicted RBP12.76□□□□□ -0.37
VSX2-201ENST00000261980 K7EM74 188 aa12.76□□□□□ -0.37
VSX2-201ENST00000261980 NDUFB3O43676 98 aa12.76□□□□□ -0.37
VSX2-201ENST00000261980 RPL7P18124 248 aaKnown RBP12.76□□□□□ -0.37
VSX2-201ENST00000261980 GAGE2BQ13066 116 aa12.76□□□□□ -0.37
VSX2-201ENST00000261980 GAGE2EQ4V326 116 aa12.76□□□□□ -0.37
VSX2-201ENST00000261980 SPANXN1Q5VSR9 72 aa12.76□□□□□ -0.37
VSX2-201ENST00000261980 Q6ZS46 218 aa12.76□□□□□ -0.37
VSX2-201ENST00000261980 PIFOQ8TCI5 191 aa12.76□□□□□ -0.37
VSX2-201ENST00000261980 GAGE2DQ9UEU5 116 aa12.76□□□□□ -0.37
VSX2-201ENST00000261980 LYNX1G3V0Z9 82 aa12.76□□□□□ -0.37
VSX2-201ENST00000261980 LYNX1P0DP58 116 aa12.76□□□□□ -0.37
VSX2-201ENST00000261980 RPL32P62910 135 aaKnown RBP12.76□□□□□ -0.37
VSX2-201ENST00000261980 GFRALQ6UXV0 394 aa12.76□□□□□ -0.37
VSX2-201ENST00000261980 FDCSPQ8NFU4 85 aa12.76□□□□□ -0.37
VSX2-201ENST00000261980 F8VRH5 84 aa12.75□□□□□ -0.37
VSX2-201ENST00000261980 MRPS12O15235 138 aaKnown RBP12.75□□□□□ -0.37
VSX2-201ENST00000261980 TTC32Q5I0X7 151 aa12.75□□□□□ -0.37
VSX2-201ENST00000261980 M0R381 172 aa12.75□□□□□ -0.37
VSX2-201ENST00000261980 SNCGO76070 127 aa12.75□□□□□ -0.37
VSX2-201ENST00000261980 IGHV3-64A0A075B6Q5 118 aa12.75□□□□□ -0.37
VSX2-201ENST00000261980 HES1Q14469 280 aa12.75□□□□□ -0.37
VSX2-201ENST00000261980 TAL2Q16559 108 aa12.75□□□□□ -0.37
VSX2-201ENST00000261980 FAM159AQ6UWV7 190 aa12.75□□□□□ -0.37
VSX2-201ENST00000261980 RPL39LQ96EH5 51 aaKnown RBP12.75□□□□□ -0.37
VSX2-201ENST00000261980 IGLV2-18A0A075B6J9 118 aa12.74□□□□□ -0.37
VSX2-201ENST00000261980 H7C1H1 209 aa12.74□□□□□ -0.37
VSX2-201ENST00000261980 PLNP26678 52 aa12.74□□□□□ -0.37
VSX2-201ENST00000261980 LINC00574Q9H8X3 128 aa12.74□□□□□ -0.37
VSX2-201ENST00000261980 DKK4Q9UBT3 224 aa12.74□□□□□ -0.37
VSX2-201ENST00000261980 IGKV3D-20A0A0C4DH25 116 aa12.74□□□□□ -0.37
VSX2-201ENST00000261980 FABP5P3A8MUU1 101 aa12.74□□□□□ -0.37
VSX2-201ENST00000261980 SHISA9B4DS77 424 aa12.74□□□□□ -0.37
VSX2-201ENST00000261980 IGHV1-8P0DP01 117 aa12.74□□□□□ -0.37
VSX2-201ENST00000261980 DEFB109BQ30KR1 87 aa12.74□□□□□ -0.37
VSX2-201ENST00000261980 IGHV4-39P01824 125 aa12.73□□□□□ -0.37
VSX2-201ENST00000261980 VSTM5A8MXK1 200 aa12.73□□□□□ -0.37
VSX2-201ENST00000261980 TNFRSF13BO14836 293 aaPredicted RBP12.73□□□□□ -0.37
VSX2-201ENST00000261980 NDUFV3P56181 108 aaKnown RBP12.73□□□□□ -0.37
VSX2-201ENST00000261980 TMEM155Q4W5P6 130 aa12.73□□□□□ -0.37
VSX2-201ENST00000261980 SEM1Q6ZVN7 128 aa12.73□□□□□ -0.37
VSX2-201ENST00000261980 IGHV1-3A0A0C4DH29 117 aa12.72□□□□□ -0.37
VSX2-201ENST00000261980 C1orf162Q8NEQ5 155 aaPredicted RBP12.72□□□□□ -0.37
VSX2-201ENST00000261980 OR11H6Q8NGC7 330 aa12.72□□□□□ -0.37
VSX2-201ENST00000261980 GAGE12JA6NER3 117 aa12.72□□□□□ -0.37
VSX2-201ENST00000261980 GAGE7O76087 117 aa12.72□□□□□ -0.37
VSX2-201ENST00000261980 GAGE12FP0CL80 117 aa12.72□□□□□ -0.37
VSX2-201ENST00000261980 GAGE12GP0CL81 117 aa12.72□□□□□ -0.37
VSX2-201ENST00000261980 GAGE12IP0CL82 117 aa12.72□□□□□ -0.37
VSX2-201ENST00000261980 LOXP28300 417 aaPredicted RBP12.72□□□□□ -0.37
VSX2-201ENST00000261980 GAGE4Q13068 117 aa12.72□□□□□ -0.37
VSX2-201ENST00000261980 NTN5Q8WTR8 489 aaPredicted RBP12.72□□□□□ -0.37
VSX2-201ENST00000261980 MGPP08493 103 aa12.72□□□□□ -0.37
VSX2-201ENST00000261980 GATA4P43694 442 aa12.72□□□□□ -0.37
VSX2-201ENST00000261980 CELSR1Q9NYQ6 3014 aa12.71□□□□□ -0.37
VSX2-201ENST00000261980 IGLV3-9A0A075B6K5 115 aa12.71□□□□□ -0.37
VSX2-201ENST00000261980 TRBV6-1A0A0K0K1D8 114 aa12.71□□□□□ -0.37
VSX2-201ENST00000261980 A6NJY4 79 aa12.71□□□□□ -0.37
VSX2-201ENST00000261980 IGHG4P01861 327 aa12.71□□□□□ -0.37
VSX2-201ENST00000261980 NDUFA11Q86Y39 141 aa12.71□□□□□ -0.37
VSX2-201ENST00000261980 NRACQ8N912 160 aa12.71□□□□□ -0.37
VSX2-201ENST00000261980 RASL10AQ92737 203 aa12.71□□□□□ -0.37
VSX2-201ENST00000261980 TEX49A0A1B0GTD5 131 aa12.71□□□□□ -0.38
VSX2-201ENST00000261980 SLC25A20O43772 301 aa12.71□□□□□ -0.38
VSX2-201ENST00000261980 Q1RN00 199 aa12.71□□□□□ -0.38
VSX2-201ENST00000261980 LYPD1Q8N2G4 141 aa12.71□□□□□ -0.38
VSX2-201ENST00000261980 BRI3O95415 125 aa12.7□□□□□ -0.38
VSX2-201ENST00000261980 DEFB1P60022 68 aa12.7□□□□□ -0.38
VSX2-201ENST00000261980 SMAD5-AS1Q9Y6J3 95 aa12.7□□□□□ -0.38
VSX2-201ENST00000261980 CEACAM4O75871 244 aa12.7□□□□□ -0.38
VSX2-201ENST00000261980 ATP6V0E2Q8NHE4 81 aa12.7□□□□□ -0.38
VSX2-201ENST00000261980 USP24Q9UPU5 2620 aa12.7□□□□□ -0.38
VSX2-201ENST00000261980 ELANEP08246 267 aa12.69□□□□□ -0.38
VSX2-201ENST00000261980 CFC1BP0CG36 223 aa12.69□□□□□ -0.38
VSX2-201ENST00000261980 CFC1P0CG37 223 aa12.69□□□□□ -0.38
VSX2-201ENST00000261980 TMEM170BQ5T4T1 132 aa12.69□□□□□ -0.38
VSX2-201ENST00000261980 C14orf178Q8N769 122 aaPredicted RBP12.69□□□□□ -0.38
VSX2-201ENST00000261980 TIMM23O14925 209 aa12.69□□□□□ -0.38
VSX2-201ENST00000261980 IGF1P05019 195 aa12.69□□□□□ -0.38
VSX2-201ENST00000261980 CD7P09564 240 aa12.68□□□□□ -0.38
VSX2-201ENST00000261980 UBE2D3P61077 147 aa12.68□□□□□ -0.38
VSX2-201ENST00000261980 UBE2D2P62837 147 aa12.68□□□□□ -0.38
VSX2-201ENST00000261980 UBE2D1P51668 147 aa12.68□□□□□ -0.38
VSX2-201ENST00000261980 TEX36Q5VZQ5 186 aa12.68□□□□□ -0.38
VSX2-201ENST00000261980 C2orf66Q6UXQ4 117 aa12.68□□□□□ -0.38
VSX2-201ENST00000261980 SPTAN1Q13813 2472 aaKnown RBP12.67□□□□□ -0.38
VSX2-201ENST00000261980 PVRIGQ6DKI7 326 aa12.67□□□□□ -0.38
VSX2-201ENST00000261980 BAALCQ8WXS3 180 aa12.67□□□□□ -0.38
VSX2-201ENST00000261980 IFITM1P13164 125 aa12.67□□□□□ -0.38
VSX2-201ENST00000261980 DUSP14O95147 198 aaKnown RBP12.66□□□□□ -0.38
VSX2-201ENST00000261980 CRYGBP07316 175 aa12.66□□□□□ -0.38
VSX2-201ENST00000261980 TSPEAR-AS2P59090 65 aa12.66□□□□□ -0.38
VSX2-201ENST00000261980 CITED1Q99966 193 aa12.66□□□□□ -0.38
VSX2-201ENST00000261980 SMIM2Q9BVW6 85 aa12.66□□□□□ -0.38
VSX2-201ENST00000261980 C11orf86A6NJI1 115 aa12.66□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms