RNA–Protein interactions for RNA: ENST00000254193.10

SNRPA1-201, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNRPA1, Length 1,055 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-201ENST00000254193 A0A0J9YY99 117 aa12.57□□□□□ -0.4
SNRPA1-201ENST00000254193 PAGE4O60829 102 aa12.57□□□□□ -0.4
SNRPA1-201ENST00000254193 H2AFB1P0C5Y9 115 aa12.57□□□□□ -0.4
SNRPA1-201ENST00000254193 PPT1P50897 306 aa12.57□□□□□ -0.4
SNRPA1-201ENST00000254193 LGALS9BQ3B8N2 356 aa12.57□□□□□ -0.4
SNRPA1-201ENST00000254193 SAPCD1Q5SSQ6 148 aa12.57□□□□□ -0.4
SNRPA1-201ENST00000254193 UBE2DNLQ8IWF7 75 aa12.57□□□□□ -0.4
SNRPA1-201ENST00000254193 HIST1H2BAQ96A08 127 aa12.57□□□□□ -0.4
SNRPA1-201ENST00000254193 C18orf15Q96N68 181 aa12.57□□□□□ -0.4
SNRPA1-201ENST00000254193 C11orf21Q9P2W6 132 aa12.57□□□□□ -0.4
SNRPA1-201ENST00000254193 ARL2-SNX15V9GYD0 113 aa12.57□□□□□ -0.4
SNRPA1-201ENST00000254193 IGHV3-16A0A0C4DH30 117 aa12.56□□□□□ -0.4
SNRPA1-201ENST00000254193 IGHV3-53P01767 116 aa12.56□□□□□ -0.4
SNRPA1-201ENST00000254193 SMUG1Q53HV7 270 aa12.56□□□□□ -0.4
SNRPA1-201ENST00000254193 SDF2L1Q9HCN8 221 aa12.56□□□□□ -0.4
SNRPA1-201ENST00000254193 A0A1B0GVG6 124 aa12.55□□□□□ -0.4
SNRPA1-201ENST00000254193 TYMSP04818 313 aa12.55□□□□□ -0.4
SNRPA1-201ENST00000254193 PFN1P07737 140 aaKnown RBP12.55□□□□□ -0.4
SNRPA1-201ENST00000254193 ZFP69Q49AA0 526 aa12.55□□□□□ -0.4
SNRPA1-201ENST00000254193 Q86TA4 180 aa12.55□□□□□ -0.4
SNRPA1-201ENST00000254193 EIF5AL1Q6IS14 154 aaKnown RBP12.54□□□□□ -0.4
SNRPA1-201ENST00000254193 KCNS1Q96KK3 526 aa12.54□□□□□ -0.4
SNRPA1-201ENST00000254193 SPXQ9BT56 116 aa12.54□□□□□ -0.4
SNRPA1-201ENST00000254193 CCL20P78556 96 aa12.53□□□□□ -0.4
SNRPA1-201ENST00000254193 RNF212Q495C1 297 aa12.53□□□□□ -0.4
SNRPA1-201ENST00000254193 SLC51BQ86UW2 128 aa12.53□□□□□ -0.4
SNRPA1-201ENST00000254193 C9orf62Q8N4C0 152 aa12.53□□□□□ -0.4
SNRPA1-201ENST00000254193 RAB5CP51148 216 aa12.52□□□□□ -0.41
SNRPA1-201ENST00000254193 RASL10AQ92737 203 aa12.52□□□□□ -0.41
SNRPA1-201ENST00000254193 VSIG2Q96IQ7 327 aa12.52□□□□□ -0.41
SNRPA1-201ENST00000254193 TCEAL7Q9BRU2 100 aa12.52□□□□□ -0.41
SNRPA1-201ENST00000254193 VPS13DQ5THJ4 4388 aa12.51□□□□□ -0.41
SNRPA1-201ENST00000254193 AKR1C3P42330 323 aa12.51□□□□□ -0.41
SNRPA1-201ENST00000254193 SULT1A2P50226 295 aa12.51□□□□□ -0.41
SNRPA1-201ENST00000254193 UBE2G1P62253 170 aa12.51□□□□□ -0.41
SNRPA1-201ENST00000254193 ZC2HC1AQ96GY0 325 aa12.51□□□□□ -0.41
SNRPA1-201ENST00000254193 FMC1Q96HJ9 113 aa12.51□□□□□ -0.41
SNRPA1-201ENST00000254193 IGLV2-18A0A075B6J9 118 aa12.5□□□□□ -0.41
SNRPA1-201ENST00000254193 TRAV1-1A0A0B4J248 108 aa12.5□□□□□ -0.41
SNRPA1-201ENST00000254193 M0R2N4 97 aa12.5□□□□□ -0.41
SNRPA1-201ENST00000254193 M0R2P5 195 aa12.5□□□□□ -0.41
SNRPA1-201ENST00000254193 SFTA3P0C7M3 94 aa12.5□□□□□ -0.41
SNRPA1-201ENST00000254193 ZFP30Q9Y2G7 519 aa12.5□□□□□ -0.41
SNRPA1-201ENST00000254193 SCO2A0A1W2PP80 73 aa12.49□□□□□ -0.41
SNRPA1-201ENST00000254193 FABP5P3A8MUU1 101 aa12.49□□□□□ -0.41
SNRPA1-201ENST00000254193 H3BNG1 76 aa12.49□□□□□ -0.41
SNRPA1-201ENST00000254193 CRIP1P50238 77 aa12.49□□□□□ -0.41
SNRPA1-201ENST00000254193 FHL2Q14192 279 aa12.49□□□□□ -0.41
SNRPA1-201ENST00000254193 ZNF479Q96JC4 524 aa12.49□□□□□ -0.41
SNRPA1-201ENST00000254193 GNG13Q9P2W3 67 aa12.49□□□□□ -0.41
SNRPA1-201ENST00000254193 KMT2AQ03164 3969 aa12.48□□□□□ -0.41
SNRPA1-201ENST00000254193 IGKV3D-20A0A0C4DH25 116 aa12.48□□□□□ -0.41
SNRPA1-201ENST00000254193 TRBV6-1A0A0K0K1D8 114 aa12.48□□□□□ -0.41
SNRPA1-201ENST00000254193 PAX4O43316 350 aa12.48□□□□□ -0.41
SNRPA1-201ENST00000254193 LTAP01374 205 aa12.48□□□□□ -0.41
SNRPA1-201ENST00000254193 CCL18P55774 89 aa12.48□□□□□ -0.41
SNRPA1-201ENST00000254193 COX8CQ7Z4L0 72 aa12.48□□□□□ -0.41
SNRPA1-201ENST00000254193 LINC00588Q9Y4M8 146 aa12.48□□□□□ -0.41
SNRPA1-201ENST00000254193 TRGV4A0A0C4DH28 118 aa12.47□□□□□ -0.41
SNRPA1-201ENST00000254193 C9JCJ5 164 aa12.47□□□□□ -0.41
SNRPA1-201ENST00000254193 SH2D1AO60880 128 aa12.47□□□□□ -0.41
SNRPA1-201ENST00000254193 ORM1P02763 201 aa12.47□□□□□ -0.41
SNRPA1-201ENST00000254193 NHLRC2Q8NBF2 726 aa12.47□□□□□ -0.41
SNRPA1-201ENST00000254193 PRO0255Q9UI72 69 aa12.47□□□□□ -0.41
SNRPA1-201ENST00000254193 HHLA3Q9XRX5 114 aa12.47□□□□□ -0.41
SNRPA1-201ENST00000254193 A0A096LPF7 62 aa12.46□□□□□ -0.41
SNRPA1-201ENST00000254193 M0R036 132 aa12.46□□□□□ -0.41
SNRPA1-201ENST00000254193 RNASE3P12724 160 aaKnown RBP12.46□□□□□ -0.41
SNRPA1-201ENST00000254193 NKX2-5P52952 324 aaPredicted RBP12.46□□□□□ -0.41
SNRPA1-201ENST00000254193 CRYBA4P53673 196 aa12.46□□□□□ -0.41
SNRPA1-201ENST00000254193 FAM3BP58499 235 aaPredicted RBP12.46□□□□□ -0.41
SNRPA1-201ENST00000254193 ZNF876PQ49A33 203 aa12.46□□□□□ -0.41
SNRPA1-201ENST00000254193 FAM162BQ5T6X4 162 aa12.46□□□□□ -0.41
SNRPA1-201ENST00000254193 OR4C5Q8NGB2 326 aa12.46□□□□□ -0.41
SNRPA1-201ENST00000254193 C9orf85Q96MD7 179 aa12.46□□□□□ -0.41
SNRPA1-201ENST00000254193 MANBALQ9NQG1 85 aa12.46□□□□□ -0.41
SNRPA1-201ENST00000254193 TRAV4A0A0B4J268 109 aa12.45□□□□□ -0.42
SNRPA1-201ENST00000254193 TEX46H3BTG2 121 aa12.45□□□□□ -0.42
SNRPA1-201ENST00000254193 SLAQ13239 276 aa12.45□□□□□ -0.42
SNRPA1-201ENST00000254193 ESRGQ1W209 222 aa12.45□□□□□ -0.42
SNRPA1-201ENST00000254193 ZNRF2Q8NHG8 242 aa12.45□□□□□ -0.42
SNRPA1-201ENST00000254193 B4DEV8 164 aa12.44□□□□□ -0.42
SNRPA1-201ENST00000254193 S100A9P06702 114 aaKnown RBP12.44□□□□□ -0.42
SNRPA1-201ENST00000254193 ZNF674Q2M3X9 581 aa12.44□□□□□ -0.42
SNRPA1-201ENST00000254193 Q6ZR54 194 aa12.44□□□□□ -0.42
SNRPA1-201ENST00000254193 PGPEP1LA6NFU8 196 aa12.43□□□□□ -0.42
SNRPA1-201ENST00000254193 KRBOX1C9JBD0 128 aa12.43□□□□□ -0.42
SNRPA1-201ENST00000254193 S100A4P26447 101 aaKnown RBP12.43□□□□□ -0.42
SNRPA1-201ENST00000254193 ASIPP42127 132 aa12.43□□□□□ -0.42
SNRPA1-201ENST00000254193 BAGE2Q86Y30 109 aa12.43□□□□□ -0.42
SNRPA1-201ENST00000254193 ICOSQ9Y6W8 199 aa12.43□□□□□ -0.42
SNRPA1-201ENST00000254193 TMSB15BA0A087X1C1 80 aa12.42□□□□□ -0.42
SNRPA1-201ENST00000254193 GRIFINA4D1Z8 144 aa12.42□□□□□ -0.42
SNRPA1-201ENST00000254193 RPL35P42766 123 aaKnown RBP12.42□□□□□ -0.42
SNRPA1-201ENST00000254193 ZNF506Q5JVG8 444 aa12.42□□□□□ -0.42
SNRPA1-201ENST00000254193 ALKAL2Q6UX46 152 aa12.42□□□□□ -0.42
SNRPA1-201ENST00000254193 DERL1Q9BUN8 251 aa12.42□□□□□ -0.42
SNRPA1-201ENST00000254193 CFAP126Q5VTH2 177 aa12.41□□□□□ -0.42
SNRPA1-201ENST00000254193 ZNF575Q86XF7 245 aa12.41□□□□□ -0.42
SNRPA1-201ENST00000254193 C11orf52Q96A22 123 aa12.41□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 69.5 ms