RNA–Protein interactions for RNA: ENST00000230085.12

SNX3-201, Transcript of sorting nexin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNX3, Length 1,755 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX3-201ENST00000230085 HILPDAQ9Y5L2 63 aa15.82■□□□□ 0.12
SNX3-201ENST00000230085 IGLV2-18A0A075B6J9 118 aa15.82■□□□□ 0.12
SNX3-201ENST00000230085 NMUP48645 174 aa15.82■□□□□ 0.12
SNX3-201ENST00000230085 ZNF80P51504 273 aaPredicted RBP15.82■□□□□ 0.12
SNX3-201ENST00000230085 C21orf62Q9NYP8 219 aa15.82■□□□□ 0.12
SNX3-201ENST00000230085 IGKV2-40A0A087WW87 121 aaPredicted RBP15.81■□□□□ 0.12
SNX3-201ENST00000230085 ODF3BA8MYP8 253 aa15.81■□□□□ 0.12
SNX3-201ENST00000230085 IGKV2D-40P01614 121 aaPredicted RBP15.81■□□□□ 0.12
SNX3-201ENST00000230085 IGKCP01834 107 aa15.81■□□□□ 0.12
SNX3-201ENST00000230085 PRB3Q04118 309 aaPredicted RBP15.81■□□□□ 0.12
SNX3-201ENST00000230085 ASCL2Q99929 193 aa15.81■□□□□ 0.12
SNX3-201ENST00000230085 SIRPDQ9H106 197 aa15.81■□□□□ 0.12
SNX3-201ENST00000230085 J3QLI3 93 aa15.8■□□□□ 0.12
SNX3-201ENST00000230085 TNFRSF6BO95407 300 aa15.8■□□□□ 0.12
SNX3-201ENST00000230085 KLF17Q5JT82 389 aaPredicted RBP15.8■□□□□ 0.12
SNX3-201ENST00000230085 CHAC1Q9BUX1 264 aa15.8■□□□□ 0.12
SNX3-201ENST00000230085 MTORP42345 2549 aa15.8■□□□□ 0.12
SNX3-201ENST00000230085 TMSB15BA0A087X1C1 80 aa15.8■□□□□ 0.12
SNX3-201ENST00000230085 OOSP1A8MZH6 123 aa15.8■□□□□ 0.12
SNX3-201ENST00000230085 M0R1W7 72 aa15.8■□□□□ 0.12
SNX3-201ENST00000230085 DPM2O94777 84 aa15.8■□□□□ 0.12
SNX3-201ENST00000230085 COX7A1P24310 79 aa15.8■□□□□ 0.12
SNX3-201ENST00000230085 IL17RELQ6ZVW7 336 aa15.8■□□□□ 0.12
SNX3-201ENST00000230085 VGLL1Q99990 258 aa15.8■□□□□ 0.12
SNX3-201ENST00000230085 CHTOPQ9Y3Y2 248 aaKnown RBP15.8■□□□□ 0.12
SNX3-201ENST00000230085 LEPP41159 167 aa15.79■□□□□ 0.12
SNX3-201ENST00000230085 EBI3Q14213 229 aa15.79■□□□□ 0.12
SNX3-201ENST00000230085 VMO1Q7Z5L0 202 aa15.79■□□□□ 0.12
SNX3-201ENST00000230085 BCL6BQ8N143 479 aaPredicted RBP15.79■□□□□ 0.12
SNX3-201ENST00000230085 SMAD5-AS1Q9Y6J3 95 aa15.79■□□□□ 0.12
SNX3-201ENST00000230085 CUBNO60494 3623 aa15.79■□□□□ 0.12
SNX3-201ENST00000230085 IGHV4-4A0A075B6R2 117 aa15.78■□□□□ 0.12
SNX3-201ENST00000230085 INAFM1C9JVW0 142 aa15.78■□□□□ 0.12
SNX3-201ENST00000230085 E9PLD3 99 aa15.78■□□□□ 0.12
SNX3-201ENST00000230085 C1orf122Q6ZSJ8 110 aa15.78■□□□□ 0.12
SNX3-201ENST00000230085 Q8N6K4 173 aa15.78■□□□□ 0.12
SNX3-201ENST00000230085 TRBV25-1A0A075B6N4 114 aa15.77■□□□□ 0.12
SNX3-201ENST00000230085 IGKV2D-26A0A0A0MRZ7 120 aa15.77■□□□□ 0.12
SNX3-201ENST00000230085 SMKR1H3BMG3 65 aa15.77■□□□□ 0.12
SNX3-201ENST00000230085 FXYD2P54710 66 aa15.77■□□□□ 0.12
SNX3-201ENST00000230085 ARPC1AQ92747 370 aa15.77■□□□□ 0.12
SNX3-201ENST00000230085 MRPL53Q96EL3 112 aaKnown RBP15.77■□□□□ 0.12
SNX3-201ENST00000230085 FOXI2Q6ZQN5 318 aa15.77■□□□□ 0.11
SNX3-201ENST00000230085 CEND1Q8N111 149 aa15.77■□□□□ 0.11
SNX3-201ENST00000230085 F8W1H4 67 aa15.76■□□□□ 0.11
SNX3-201ENST00000230085 ZNF207O43670 478 aaKnown RBP15.76■□□□□ 0.11
SNX3-201ENST00000230085 CTSGP08311 255 aa15.76■□□□□ 0.11
SNX3-201ENST00000230085 SLC50A1Q9BRV3 221 aa15.76■□□□□ 0.11
SNX3-201ENST00000230085 TMEM160Q9NX00 188 aa15.76■□□□□ 0.11
SNX3-201ENST00000230085 FN1P02751 2386 aaKnown RBP15.76■□□□□ 0.11
SNX3-201ENST00000230085 IGHV3OR16-10A0A075B7F0 116 aa15.75■□□□□ 0.11
SNX3-201ENST00000230085 PRTN3P24158 256 aa15.75■□□□□ 0.11
SNX3-201ENST00000230085 NSD1Q96L73 2696 aaPredicted RBP15.75■□□□□ 0.11
SNX3-201ENST00000230085 TRAV40A0A0B4J280 105 aa15.75■□□□□ 0.11
SNX3-201ENST00000230085 IGHV4-38-2P0DP08 117 aa15.75■□□□□ 0.11
SNX3-201ENST00000230085 RIPPLY3P57055 190 aa15.75■□□□□ 0.11
SNX3-201ENST00000230085 KLRD1Q13241 179 aa15.75■□□□□ 0.11
SNX3-201ENST00000230085 CCDC144NLQ6NUI1 221 aa15.75■□□□□ 0.11
SNX3-201ENST00000230085 RAB37Q96AX2 223 aa15.75■□□□□ 0.11
SNX3-201ENST00000230085 MXRA5Q9NR99 2828 aa15.74■□□□□ 0.11
SNX3-201ENST00000230085 CENPVL3A0A0U1RRI6 287 aa15.74■□□□□ 0.11
SNX3-201ENST00000230085 A0A1B0GWB2 263 aa15.74■□□□□ 0.11
SNX3-201ENST00000230085 TRAV12-1A0A0B4J245 112 aa15.73■□□□□ 0.11
SNX3-201ENST00000230085 GCSHP23434 173 aa15.73■□□□□ 0.11
SNX3-201ENST00000230085 FXYD7P58549 80 aa15.73■□□□□ 0.11
SNX3-201ENST00000230085 MSRB1Q9NZV6 116 aa15.73■□□□□ 0.11
SNX3-201ENST00000230085 CIDEAO60543 219 aa15.72■□□□□ 0.11
SNX3-201ENST00000230085 ORM1P02763 201 aa15.72■□□□□ 0.11
SNX3-201ENST00000230085 PRSS1P07477 247 aa15.72■□□□□ 0.11
SNX3-201ENST00000230085 PLNP26678 52 aa15.72■□□□□ 0.11
SNX3-201ENST00000230085 Q8TAT8 98 aa15.72■□□□□ 0.11
SNX3-201ENST00000230085 TMEM158Q8WZ71 300 aa15.72■□□□□ 0.11
SNX3-201ENST00000230085 A0A087WX48 190 aa15.72■□□□□ 0.11
SNX3-201ENST00000230085 K7EMI3 77 aa15.72■□□□□ 0.11
SNX3-201ENST00000230085 FSHBP01225 129 aa15.72■□□□□ 0.11
SNX3-201ENST00000230085 NRACQ8N912 160 aa15.72■□□□□ 0.11
SNX3-201ENST00000230085 A0A1W2PRD5 423 aa15.71■□□□□ 0.11
SNX3-201ENST00000230085 A0A1W2PRF3 423 aa15.71■□□□□ 0.11
SNX3-201ENST00000230085 A0A1W2PRM7 423 aa15.71■□□□□ 0.11
SNX3-201ENST00000230085 ZC2HC1BQ5TFG8 222 aa15.71■□□□□ 0.11
SNX3-201ENST00000230085 BRD3OSQ6XYD6 125 aa15.71■□□□□ 0.11
SNX3-201ENST00000230085 NAA38Q9BRA0 125 aaKnown RBP15.71■□□□□ 0.11
SNX3-201ENST00000230085 NDPQ00604 133 aa15.7■□□□□ 0.1
SNX3-201ENST00000230085 LAGE3Q14657 143 aa15.7■□□□□ 0.1
SNX3-201ENST00000230085 MINOS1Q5TGZ0 78 aa15.7■□□□□ 0.1
SNX3-201ENST00000230085 DYNAPQ8N1N2 210 aa15.7■□□□□ 0.1
SNX3-201ENST00000230085 C18orf15Q96N68 181 aa15.7■□□□□ 0.1
SNX3-201ENST00000230085 ZFAND3Q9H8U3 227 aa15.7■□□□□ 0.1
SNX3-201ENST00000230085 MINOS1-NBL1R4GNA1 71 aa15.7■□□□□ 0.1
SNX3-201ENST00000230085 IGLL5B9A064 214 aa15.7■□□□□ 0.1
SNX3-201ENST00000230085 J3QR89 54 aa15.7■□□□□ 0.1
SNX3-201ENST00000230085 NIPBLQ6KC79 2804 aaeCLIP15.69■□□□□ 0.1
SNX3-201ENST00000230085 IGHV1-69DA0A0B4J2H0 117 aa15.69■□□□□ 0.1
SNX3-201ENST00000230085 BUB3O43684 328 aa15.69■□□□□ 0.1
SNX3-201ENST00000230085 IGHV1-69P01742 117 aa15.69■□□□□ 0.1
SNX3-201ENST00000230085 UBE2E1P51965 193 aa15.69■□□□□ 0.1
SNX3-201ENST00000230085 MYOZ3Q8TDC0 251 aa15.69■□□□□ 0.1
SNX3-201ENST00000230085 MRAP2Q96G30 205 aa15.69■□□□□ 0.1
SNX3-201ENST00000230085 IGKV3D-20A0A0C4DH25 116 aa15.68■□□□□ 0.1
SNX3-201ENST00000230085 TEX48A0A1B0GUV7 120 aa15.68■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms