RNA–Protein interactions for RNA: ENST00000612303.1

NEAT1-204, nuclear paraspeckle assembly transcript 1, humanhuman

TSL 3 BASIC

Gene NEAT1, Length 572 nt, Biotype lincRNA, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEAT1-204ENST00000612303 HLA-DRB4P13762 266 aa9.9□□□□□ -0.82
NEAT1-204ENST00000612303 TSPOP30536 169 aa9.9□□□□□ -0.82
NEAT1-204ENST00000612303 GDF5OSQ5U4N7 250 aa9.9□□□□□ -0.82
NEAT1-204ENST00000612303 KCNIP4Q6PIL6 250 aa9.9□□□□□ -0.82
NEAT1-204ENST00000612303 ZFAND2AQ8N6M9 145 aa9.9□□□□□ -0.82
NEAT1-204ENST00000612303 YPEL4Q96NS1 127 aa9.9□□□□□ -0.82
NEAT1-204ENST00000612303 RPP21Q9H633 154 aaKnown RBP9.9□□□□□ -0.82
NEAT1-204ENST00000612303 IL36BQ9NZH7 164 aa9.9□□□□□ -0.82
NEAT1-204ENST00000612303 HLA-DRB4X5D2U9 266 aa9.9□□□□□ -0.82
NEAT1-204ENST00000612303 FBN1P35555 2871 aaKnown RBP9.9□□□□□ -0.82
NEAT1-204ENST00000612303 AGRNO00468 2067 aa9.89□□□□□ -0.83
NEAT1-204ENST00000612303 TRAV9-1A0A075B6T8 112 aa9.89□□□□□ -0.83
NEAT1-204ENST00000612303 FAM231BA6NCW3 169 aa9.89□□□□□ -0.83
NEAT1-204ENST00000612303 OR11H12B2RN74 326 aa9.89□□□□□ -0.83
NEAT1-204ENST00000612303 H3BMM0 161 aa9.89□□□□□ -0.83
NEAT1-204ENST00000612303 SH2D1AO60880 128 aa9.89□□□□□ -0.83
NEAT1-204ENST00000612303 LEPP41159 167 aa9.89□□□□□ -0.83
NEAT1-204ENST00000612303 ODF3L2Q3SX64 289 aa9.89□□□□□ -0.83
NEAT1-204ENST00000612303 BTF3L4Q96K17 158 aa9.89□□□□□ -0.83
NEAT1-204ENST00000612303 TRBV24-1A0A075B6N3 115 aa9.88□□□□□ -0.83
NEAT1-204ENST00000612303 SMIM27A0A1W2PRY6 76 aa9.88□□□□□ -0.83
NEAT1-204ENST00000612303 COLCA2A8K830 154 aa9.88□□□□□ -0.83
NEAT1-204ENST00000612303 KLLNB2CW77 178 aa9.88□□□□□ -0.83
NEAT1-204ENST00000612303 GPX1P07203 203 aa9.88□□□□□ -0.83
NEAT1-204ENST00000612303 ZNF80P51504 273 aaPredicted RBP9.88□□□□□ -0.83
NEAT1-204ENST00000612303 RPS20P60866 119 aaKnown RBP9.88□□□□□ -0.83
NEAT1-204ENST00000612303 ELOBQ15370 118 aa9.88□□□□□ -0.83
NEAT1-204ENST00000612303 ACTL10Q5JWF8 245 aa9.88□□□□□ -0.83
NEAT1-204ENST00000612303 OR2D3Q8NGH3 330 aa9.88□□□□□ -0.83
NEAT1-204ENST00000612303 TSKUQ8WUA8 353 aa9.88□□□□□ -0.83
NEAT1-204ENST00000612303 PYGO2Q9BRQ0 406 aa9.88□□□□□ -0.83
NEAT1-204ENST00000612303 TRAV21A0A0B4J279 112 aa9.87□□□□□ -0.83
NEAT1-204ENST00000612303 XKRY2A2RUG3 117 aa9.87□□□□□ -0.83
NEAT1-204ENST00000612303 KNCNA6PVL3 124 aa9.87□□□□□ -0.83
NEAT1-204ENST00000612303 Q6AWC8 147 aa9.87□□□□□ -0.83
NEAT1-204ENST00000612303 AMTNQ6UX39 209 aa9.87□□□□□ -0.83
NEAT1-204ENST00000612303 SPATA3Q8NHX4 192 aa9.87□□□□□ -0.83
NEAT1-204ENST00000612303 GFRA4Q9GZZ7 299 aa9.87□□□□□ -0.83
NEAT1-204ENST00000612303 TMEM189A5PLL7 270 aa9.86□□□□□ -0.83
NEAT1-204ENST00000612303 RPL19P84098 196 aaKnown RBP9.86□□□□□ -0.83
NEAT1-204ENST00000612303 C19orf73Q9NVV2 129 aa9.86□□□□□ -0.83
NEAT1-204ENST00000612303 NOTCH3Q9UM47 2321 aa9.86□□□□□ -0.83
NEAT1-204ENST00000612303 URGCP-MRPS24S4R325 110 aa9.86□□□□□ -0.83
NEAT1-204ENST00000612303 COL6A5A8TX70 2615 aa9.86□□□□□ -0.83
NEAT1-204ENST00000612303 STAB1Q9NY15 2570 aa9.85□□□□□ -0.83
NEAT1-204ENST00000612303 C7orf71A4D174 169 aa9.85□□□□□ -0.83
NEAT1-204ENST00000612303 AMBPP02760 352 aa9.85□□□□□ -0.83
NEAT1-204ENST00000612303 CDKN1BP46527 198 aa9.85□□□□□ -0.83
NEAT1-204ENST00000612303 FOXA3P55318 350 aaPredicted RBP9.85□□□□□ -0.83
NEAT1-204ENST00000612303 LINC01559Q495D7 138 aa9.85□□□□□ -0.83
NEAT1-204ENST00000612303 NAT8BQ9UHF3 227 aa9.85□□□□□ -0.83
NEAT1-204ENST00000612303 CA1P00915 261 aaPredicted RBP9.84□□□□□ -0.83
NEAT1-204ENST00000612303 ORM1P02763 201 aa9.84□□□□□ -0.83
NEAT1-204ENST00000612303 CXCL1P09341 107 aa9.84□□□□□ -0.83
NEAT1-204ENST00000612303 CD7P09564 240 aa9.84□□□□□ -0.83
NEAT1-204ENST00000612303 IGLL1P15814 213 aa9.84□□□□□ -0.83
NEAT1-204ENST00000612303 RNASE4P34096 147 aaKnown RBP9.84□□□□□ -0.83
NEAT1-204ENST00000612303 FAM3BP58499 235 aaPredicted RBP9.84□□□□□ -0.83
NEAT1-204ENST00000612303 ZNF124Q15973 351 aa9.84□□□□□ -0.83
NEAT1-204ENST00000612303 PRR31Q5SQ13 230 aa9.84□□□□□ -0.83
NEAT1-204ENST00000612303 PRR9Q5T870 116 aa9.84□□□□□ -0.83
NEAT1-204ENST00000612303 STHQ8IWL8 128 aa9.84□□□□□ -0.83
NEAT1-204ENST00000612303 VWFP04275 2813 aa9.83□□□□□ -0.84
NEAT1-204ENST00000612303 TGIF2-C20orf24A0A0A6YYL0 155 aa9.83□□□□□ -0.84
NEAT1-204ENST00000612303 A0A1W2PPQ1 181 aa9.83□□□□□ -0.84
NEAT1-204ENST00000612303 IGKV3-20P01619 116 aa9.83□□□□□ -0.84
NEAT1-204ENST00000612303 TYMSP04818 313 aa9.83□□□□□ -0.84
NEAT1-204ENST00000612303 TRPT1Q86TN4 253 aaKnown RBP9.83□□□□□ -0.84
NEAT1-204ENST00000612303 GTSCR1Q86UQ5 136 aa9.83□□□□□ -0.84
NEAT1-204ENST00000612303 FAM210BQ96KR6 192 aa9.83□□□□□ -0.84
NEAT1-204ENST00000612303 NEU1Q99519 415 aa9.83□□□□□ -0.84
NEAT1-204ENST00000612303 ZMAT5Q9UDW3 170 aaKnown RBP9.83□□□□□ -0.84
NEAT1-204ENST00000612303 IGKV3D-20A0A0C4DH25 116 aa9.82□□□□□ -0.84
NEAT1-204ENST00000612303 RBMY1BA6NDE4 496 aaKnown RBP9.82□□□□□ -0.84
NEAT1-204ENST00000612303 RBMY1EA6NEQ0 496 aaKnown RBP9.82□□□□□ -0.84
NEAT1-204ENST00000612303 HIGD1CA8MV81 97 aa9.82□□□□□ -0.84
NEAT1-204ENST00000612303 ZNF324O75467 553 aaPredicted RBP9.82□□□□□ -0.84
NEAT1-204ENST00000612303 RBMY1DP0C7P1 496 aaKnown RBP9.82□□□□□ -0.84
NEAT1-204ENST00000612303 RAB5AP20339 215 aa9.82□□□□□ -0.84
NEAT1-204ENST00000612303 SPINK13Q1W4C9 94 aa9.82□□□□□ -0.84
NEAT1-204ENST00000612303 SREK1IP1Q8N9Q2 155 aaPredicted RBP9.82□□□□□ -0.84
NEAT1-204ENST00000612303 NUP35Q8NFH5 326 aa9.82□□□□□ -0.84
NEAT1-204ENST00000612303 GTSF1Q8WW33 167 aa9.82□□□□□ -0.84
NEAT1-204ENST00000612303 C20orf144Q9BQM9 153 aa9.82□□□□□ -0.84
NEAT1-204ENST00000612303 C11orf21Q9P2W6 132 aa9.82□□□□□ -0.84
NEAT1-204ENST00000612303 J3KRW8 73 aa9.81□□□□□ -0.84
NEAT1-204ENST00000612303 M0R2Z0 102 aa9.81□□□□□ -0.84
NEAT1-204ENST00000612303 TCL1AP56279 114 aa9.81□□□□□ -0.84
NEAT1-204ENST00000612303 NUTF2P61970 127 aaKnown RBP9.81□□□□□ -0.84
NEAT1-204ENST00000612303 KIR3DS1Q14943 382 aa9.81□□□□□ -0.84
NEAT1-204ENST00000612303 COX19Q49B96 90 aa9.81□□□□□ -0.84
NEAT1-204ENST00000612303 DNLZQ5SXM8 178 aa9.81□□□□□ -0.84
NEAT1-204ENST00000612303 GFI1BQ5VTD9 330 aa9.81□□□□□ -0.84
NEAT1-204ENST00000612303 ZNF575Q86XF7 245 aa9.81□□□□□ -0.84
NEAT1-204ENST00000612303 LURAP1LQ8IV03 231 aa9.81□□□□□ -0.84
NEAT1-204ENST00000612303 KCNS1Q96KK3 526 aa9.81□□□□□ -0.84
NEAT1-204ENST00000612303 TRAV12-3A0A0B4J271 114 aa9.8□□□□□ -0.84
NEAT1-204ENST00000612303 CRXO43186 299 aaPredicted RBP9.8□□□□□ -0.84
NEAT1-204ENST00000612303 IGLC6P0CF74 106 aa9.8□□□□□ -0.84
NEAT1-204ENST00000612303 TDRG1Q3Y452 100 aa9.8□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 95.4 ms