RNA–Protein interactions for RNA: ENST00000611405.4

SRRT-213, Transcript of serrate, RNA effector molecule, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SRRT, Length 2,905 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRT-213ENST00000611405 MUC21Q5SSG8 566 aa9.1□□□□□ -0.95
SRRT-213ENST00000611405 ATOH7Q8N100 152 aa9.1□□□□□ -0.95
SRRT-213ENST00000611405 BBC3Q96PG8 261 aaPredicted RBP9.1□□□□□ -0.95
SRRT-213ENST00000611405 DEFB112Q30KQ8 113 aa9.09□□□□□ -0.95
SRRT-213ENST00000611405 PET117Q6UWS5 81 aa9.09□□□□□ -0.95
SRRT-213ENST00000611405 LINC00173Q6ZV60 143 aa9.09□□□□□ -0.95
SRRT-213ENST00000611405 SPATA12Q7Z6I5 190 aa9.09□□□□□ -0.95
SRRT-213ENST00000611405 ZNF738Q8NE65 137 aa9.09□□□□□ -0.95
SRRT-213ENST00000611405 OVOL1O14753 267 aa9.09□□□□□ -0.95
SRRT-213ENST00000611405 ZNF843Q8N446 348 aa9.09□□□□□ -0.95
SRRT-213ENST00000611405 OR10AG1Q8NH19 301 aa9.09□□□□□ -0.95
SRRT-213ENST00000611405 C20orf173Q96LM9 149 aa9.09□□□□□ -0.95
SRRT-213ENST00000611405 FLNCQ14315 2725 aa9.09□□□□□ -0.95
SRRT-213ENST00000611405 IGKV3D-20A0A0C4DH25 116 aa9.08□□□□□ -0.96
SRRT-213ENST00000611405 SOCS3O14543 225 aa9.08□□□□□ -0.96
SRRT-213ENST00000611405 CKS2P33552 79 aa9.08□□□□□ -0.96
SRRT-213ENST00000611405 GPHB5Q86YW7 130 aa9.08□□□□□ -0.96
SRRT-213ENST00000611405 LINC00477Q96M19 166 aa9.08□□□□□ -0.96
SRRT-213ENST00000611405 SIGLEC8Q9NYZ4 499 aa9.08□□□□□ -0.96
SRRT-213ENST00000611405 IFI27P40305 119 aaPredicted RBP9.08□□□□□ -0.96
SRRT-213ENST00000611405 SPG11Q96JI7 2443 aa9.08□□□□□ -0.96
SRRT-213ENST00000611405 IGHV7-4-1A0A0J9YVY3 117 aa9.08□□□□□ -0.96
SRRT-213ENST00000611405 OR4C46A6NHA9 309 aa9.08□□□□□ -0.96
SRRT-213ENST00000611405 IGHV4-59P01825 116 aa9.08□□□□□ -0.96
SRRT-213ENST00000611405 PPBPP02775 128 aa9.08□□□□□ -0.96
SRRT-213ENST00000611405 LOXL1Q08397 574 aaPredicted RBP9.08□□□□□ -0.96
SRRT-213ENST00000611405 C11orf21Q9P2W6 132 aa9.08□□□□□ -0.96
SRRT-213ENST00000611405 PEF1Q9UBV8 284 aaKnown RBP9.08□□□□□ -0.96
SRRT-213ENST00000611405 TMEM89A2RUT3 159 aa9.07□□□□□ -0.96
SRRT-213ENST00000611405 TGFAP01135 160 aa9.07□□□□□ -0.96
SRRT-213ENST00000611405 SRSF1Q07955 248 aaKnown RBP eCLIP9.07□□□□□ -0.962e-8■■■□□ 14.7
SRRT-213ENST00000611405 OR10J6PQ8NGY7 276 aa9.07□□□□□ -0.96
SRRT-213ENST00000611405 LOC389332A0A1B0GUA5 103 aa9.07□□□□□ -0.96
SRRT-213ENST00000611405 K7EMT4 169 aa9.07□□□□□ -0.96
SRRT-213ENST00000611405 NUTF2P61970 127 aaKnown RBP9.07□□□□□ -0.96
SRRT-213ENST00000611405 LCNL1Q6ZST4 164 aa9.07□□□□□ -0.96
SRRT-213ENST00000611405 RNF185Q96GF1 192 aa9.07□□□□□ -0.96
SRRT-213ENST00000611405 Q6ZN92 141 aa9.06□□□□□ -0.96
SRRT-213ENST00000611405 RHPN1-AS1Q9BWJ2 59 aa9.06□□□□□ -0.96
SRRT-213ENST00000611405 DAZ1Q9NQZ3 744 aaKnown RBP9.06□□□□□ -0.96
SRRT-213ENST00000611405 MSRB1Q9NZV6 116 aa9.06□□□□□ -0.96
SRRT-213ENST00000611405 LAMTOR2Q9Y2Q5 125 aa9.06□□□□□ -0.96
SRRT-213ENST00000611405 IGLL1P15814 213 aa9.06□□□□□ -0.96
SRRT-213ENST00000611405 PSMB8P28062 276 aa9.06□□□□□ -0.96
SRRT-213ENST00000611405 HNRNPA3P51991 378 aaKnown RBP9.06□□□□□ -0.96
SRRT-213ENST00000611405 FAM106AQ4KMX7 169 aa9.06□□□□□ -0.96
SRRT-213ENST00000611405 ZNF747Q9BV97 191 aa9.06□□□□□ -0.96
SRRT-213ENST00000611405 A1L4Q6 167 aa9.05□□□□□ -0.96
SRRT-213ENST00000611405 FOXE3Q13461 319 aa9.05□□□□□ -0.96
SRRT-213ENST00000611405 ST20Q9HBF5 79 aa9.05□□□□□ -0.96
SRRT-213ENST00000611405 SMPXQ9UHP9 88 aa9.05□□□□□ -0.96
SRRT-213ENST00000611405 SMKR1H3BMG3 65 aa9.05□□□□□ -0.96
SRRT-213ENST00000611405 NPYP01303 97 aa9.05□□□□□ -0.96
SRRT-213ENST00000611405 RPL11P62913 178 aaKnown RBP9.05□□□□□ -0.96
SRRT-213ENST00000611405 BEX4Q9NWD9 120 aaPredicted RBP9.05□□□□□ -0.96
SRRT-213ENST00000611405 VPS13CQ709C8 3753 aa9.05□□□□□ -0.96
SRRT-213ENST00000611405 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP9.05□□□□□ -0.966e-7■■■□□ 19
SRRT-213ENST00000611405 TCF21O43680 179 aa9.04□□□□□ -0.96
SRRT-213ENST00000611405 CACNG7P62955 275 aa9.04□□□□□ -0.96
SRRT-213ENST00000611405 LINC01545Q5VT33 79 aa9.04□□□□□ -0.96
SRRT-213ENST00000611405 SMIM15Q7Z3B0 74 aa9.04□□□□□ -0.96
SRRT-213ENST00000611405 TIMM8BQ9Y5J9 83 aaPredicted RBP9.04□□□□□ -0.96
SRRT-213ENST00000611405 MYO18BQ8IUG5 2567 aa9.04□□□□□ -0.96
SRRT-213ENST00000611405 IGHV4-4A0A075B6R2 117 aa9.04□□□□□ -0.96
SRRT-213ENST00000611405 RNF223E7ERA6 249 aa9.04□□□□□ -0.96
SRRT-213ENST00000611405 FSHBP01225 129 aa9.04□□□□□ -0.96
SRRT-213ENST00000611405 SAMD13Q5VXD3 122 aa9.04□□□□□ -0.96
SRRT-213ENST00000611405 MAP1LC3AQ9H492 121 aa9.04□□□□□ -0.96
SRRT-213ENST00000611405 USP24Q9UPU5 2620 aa9.04□□□□□ -0.96
SRRT-213ENST00000611405 SNAI2O43623 268 aa9.04□□□□□ -0.96
SRRT-213ENST00000611405 NCR2O95944 276 aa9.04□□□□□ -0.96
SRRT-213ENST00000611405 IGHV4-31P0DP07 118 aa9.04□□□□□ -0.96
SRRT-213ENST00000611405 PRSS57Q6UWY2 283 aa9.04□□□□□ -0.96
SRRT-213ENST00000611405 UFC1Q9Y3C8 167 aa9.04□□□□□ -0.96
SRRT-213ENST00000611405 MRPS16Q9Y3D3 137 aaKnown RBP9.04□□□□□ -0.96
SRRT-213ENST00000611405 A0A096LNJ9 63 aa9.03□□□□□ -0.96
SRRT-213ENST00000611405 TRAV21A0A0B4J279 112 aa9.03□□□□□ -0.96
SRRT-213ENST00000611405 TRBV7-9A0A0J9YWB2 115 aa9.03□□□□□ -0.96
SRRT-213ENST00000611405 PRR9Q5T870 116 aa9.03□□□□□ -0.96
SRRT-213ENST00000611405 ZFAND2AQ8N6M9 145 aa9.03□□□□□ -0.96
SRRT-213ENST00000611405 MAPK1IP1LQ8NDC0 245 aa9.03□□□□□ -0.96
SRRT-213ENST00000611405 HBDP02042 147 aa9.03□□□□□ -0.96
SRRT-213ENST00000611405 RPLP1P05386 114 aaKnown RBP9.03□□□□□ -0.96
SRRT-213ENST00000611405 TSPOP30536 169 aa9.03□□□□□ -0.96
SRRT-213ENST00000611405 LRRC75A-AS1Q8N1F1 130 aa9.03□□□□□ -0.96
SRRT-213ENST00000611405 OR8A1Q8NGG7 326 aa9.03□□□□□ -0.96
SRRT-213ENST00000611405 FAM19A4Q96LR4 140 aa9.03□□□□□ -0.96
SRRT-213ENST00000611405 VPREB3Q9UKI3 123 aa9.03□□□□□ -0.96
SRRT-213ENST00000611405 LINC01546A6NGU7 62 aa9.02□□□□□ -0.96
SRRT-213ENST00000611405 ID1P41134 155 aa9.02□□□□□ -0.97
SRRT-213ENST00000611405 DEFB113Q30KQ7 82 aa9.02□□□□□ -0.97
SRRT-213ENST00000611405 Q6YL49 198 aa9.02□□□□□ -0.97
SRRT-213ENST00000611405 MS4A6AQ9H2W1 248 aa9.02□□□□□ -0.97
SRRT-213ENST00000611405 H0Y8G0 127 aa9.01□□□□□ -0.97
SRRT-213ENST00000611405 TNFRSF6BO95407 300 aa9.01□□□□□ -0.97
SRRT-213ENST00000611405 G0S2P27469 103 aa9.01□□□□□ -0.97
SRRT-213ENST00000611405 APRG1Q8IVJ8 170 aa9.01□□□□□ -0.97
SRRT-213ENST00000611405 NXT2Q9NPJ8 142 aaKnown RBP9.01□□□□□ -0.97
SRRT-213ENST00000611405 ZNF462Q96JM2 2506 aa9.01□□□□□ -0.97
SRRT-213ENST00000611405 hDV102S1A0JD36 115 aa9.01□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 193.7 ms