RNA–Protein interactions for RNA: ENST00000610828.4

NEK3-205, Transcript of NIMA related kinase 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene NEK3, Length 2,396 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-205ENST00000610828 BEX4Q9NWD9 120 aaPredicted RBP10.38□□□□□ -0.75
NEK3-205ENST00000610828 PEF1Q9UBV8 284 aaKnown RBP10.38□□□□□ -0.75
NEK3-205ENST00000610828 SELENOKQ9Y6D0 94 aa10.38□□□□□ -0.75
NEK3-205ENST00000610828 PSMB8P28062 276 aa10.37□□□□□ -0.75
NEK3-205ENST00000610828 LBHQ53QV2 105 aaPredicted RBP10.37□□□□□ -0.75
NEK3-205ENST00000610828 FAM104BQ5XKR9 115 aa10.37□□□□□ -0.75
NEK3-205ENST00000610828 ZNF705AQ6ZN79 300 aaPredicted RBP10.37□□□□□ -0.75
NEK3-205ENST00000610828 DAZ1Q9NQZ3 744 aaKnown RBP10.37□□□□□ -0.75
NEK3-205ENST00000610828 CR1P17927 2039 aa10.37□□□□□ -0.75
NEK3-205ENST00000610828 ZNF469Q96JG9 3925 aaPredicted RBP10.37□□□□□ -0.75
NEK3-205ENST00000610828 IGHV7-4-1A0A0J9YVY3 117 aa10.37□□□□□ -0.75
NEK3-205ENST00000610828 C2orf70A6NJV1 201 aa10.37□□□□□ -0.75
NEK3-205ENST00000610828 D6R8Y8 96 aa10.37□□□□□ -0.75
NEK3-205ENST00000610828 C20orf144Q9BQM9 153 aa10.37□□□□□ -0.75
NEK3-205ENST00000610828 RHPN1-AS1Q9BWJ2 59 aa10.37□□□□□ -0.75
NEK3-205ENST00000610828 ZNF580Q9UK33 172 aa10.37□□□□□ -0.75
NEK3-205ENST00000610828 ATOH7Q8N100 152 aa10.36□□□□□ -0.75
NEK3-205ENST00000610828 SNHG12Q9BXW3 62 aa10.36□□□□□ -0.75
NEK3-205ENST00000610828 VPREB3Q9UKI3 123 aa10.36□□□□□ -0.75
NEK3-205ENST00000610828 MXRA5Q9NR99 2828 aa10.36□□□□□ -0.75
NEK3-205ENST00000610828 IGKV3D-20A0A0C4DH25 116 aa10.36□□□□□ -0.75
NEK3-205ENST00000610828 LEPROTL1O95214 131 aa10.36□□□□□ -0.75
NEK3-205ENST00000610828 HIST1H1AQ02539 215 aaPredicted RBP10.36□□□□□ -0.75
NEK3-205ENST00000610828 Q96MF0 132 aa10.36□□□□□ -0.75
NEK3-205ENST00000610828 MSRB1Q9NZV6 116 aa10.36□□□□□ -0.75
NEK3-205ENST00000610828 C11orf21Q9P2W6 132 aa10.36□□□□□ -0.75
NEK3-205ENST00000610828 SOCS3O14543 225 aa10.35□□□□□ -0.75
NEK3-205ENST00000610828 FOXE3Q13461 319 aa10.35□□□□□ -0.75
NEK3-205ENST00000610828 FAM106AQ4KMX7 169 aa10.35□□□□□ -0.75
NEK3-205ENST00000610828 MRPL51Q4U2R6 128 aaKnown RBP10.35□□□□□ -0.75
NEK3-205ENST00000610828 PRSS3P2Q8NHM4 247 aa10.35□□□□□ -0.75
NEK3-205ENST00000610828 TMEM70Q9BUB7 260 aa10.35□□□□□ -0.75
NEK3-205ENST00000610828 AP5S1Q9NUS5 200 aa10.35□□□□□ -0.75
NEK3-205ENST00000610828 TIMM8BQ9Y5J9 83 aaPredicted RBP10.35□□□□□ -0.75
NEK3-205ENST00000610828 J3KRW8 73 aa10.34□□□□□ -0.75
NEK3-205ENST00000610828 FSHBP01225 129 aa10.34□□□□□ -0.75
NEK3-205ENST00000610828 EDN2P20800 178 aa10.34□□□□□ -0.75
NEK3-205ENST00000610828 DEFB1P60022 68 aa10.34□□□□□ -0.75
NEK3-205ENST00000610828 SPATA45Q537H7 98 aa10.34□□□□□ -0.75
NEK3-205ENST00000610828 ORMDL3Q8N138 153 aa10.34□□□□□ -0.75
NEK3-205ENST00000610828 LRRC75A-AS1Q8N1F1 130 aa10.34□□□□□ -0.75
NEK3-205ENST00000610828 OR10J6PQ8NGY7 276 aa10.34□□□□□ -0.75
NEK3-205ENST00000610828 PRELID3AQ96N28 172 aa10.34□□□□□ -0.75
NEK3-205ENST00000610828 PSMG3-AS1Q96PY0 264 aa10.34□□□□□ -0.75
NEK3-205ENST00000610828 CREBBPQ92793 2442 aa10.34□□□□□ -0.75
NEK3-205ENST00000610828 TEX15Q9BXT5 2789 aa10.34□□□□□ -0.75
NEK3-205ENST00000610828 LOC389332A0A1B0GUA5 103 aa10.34□□□□□ -0.75
NEK3-205ENST00000610828 Q6YL49 198 aa10.34□□□□□ -0.75
NEK3-205ENST00000610828 Q6ZQT7 251 aa10.34□□□□□ -0.75
NEK3-205ENST00000610828 LINC00173Q6ZV60 143 aa10.34□□□□□ -0.75
NEK3-205ENST00000610828 APCP25054 2843 aa10.34□□□□□ -0.75
NEK3-205ENST00000610828 M0R143 59 aa10.33□□□□□ -0.76
NEK3-205ENST00000610828 HOXA3O43365 443 aaPredicted RBP10.33□□□□□ -0.76
NEK3-205ENST00000610828 RPLP1P05386 114 aaKnown RBP10.33□□□□□ -0.76
NEK3-205ENST00000610828 SRD5A1P18405 259 aa10.33□□□□□ -0.76
NEK3-205ENST00000610828 RAB4AP20338 218 aa10.33□□□□□ -0.76
NEK3-205ENST00000610828 IFI27P40305 119 aaPredicted RBP10.33□□□□□ -0.76
NEK3-205ENST00000610828 DMRTA1Q5VZB9 504 aa10.33□□□□□ -0.76
NEK3-205ENST00000610828 FA2HQ7L5A8 372 aa10.33□□□□□ -0.76
NEK3-205ENST00000610828 MIEN1Q9BRT3 115 aa10.33□□□□□ -0.76
NEK3-205ENST00000610828 CNFNQ9BYD5 112 aa10.33□□□□□ -0.76
NEK3-205ENST00000610828 SMPXQ9UHP9 88 aa10.33□□□□□ -0.76
NEK3-205ENST00000610828 CKS2P33552 79 aa10.33□□□□□ -0.76
NEK3-205ENST00000610828 MAJINQ3KP22 176 aa10.33□□□□□ -0.76
NEK3-205ENST00000610828 PRR9Q5T870 116 aa10.33□□□□□ -0.76
NEK3-205ENST00000610828 LINC00477Q96M19 166 aa10.33□□□□□ -0.76
NEK3-205ENST00000610828 TMEM191AQ9H0A3 160 aa10.33□□□□□ -0.76
NEK3-205ENST00000610828 U3KQK5 164 aa10.33□□□□□ -0.76
NEK3-205ENST00000610828 DOPEY2Q9Y3R5 2298 aa10.33□□□□□ -0.76
NEK3-205ENST00000610828 SMKR1H3BMG3 65 aa10.32□□□□□ -0.76
NEK3-205ENST00000610828 OVOL1O14753 267 aa10.32□□□□□ -0.76
NEK3-205ENST00000610828 CFAP161Q6P656 301 aa10.32□□□□□ -0.76
NEK3-205ENST00000610828 SPATA12Q7Z6I5 190 aa10.32□□□□□ -0.76
NEK3-205ENST00000610828 LENEPQ9Y5L5 61 aa10.32□□□□□ -0.76
NEK3-205ENST00000610828 F6UB75 175 aa10.32□□□□□ -0.76
NEK3-205ENST00000610828 K7EMT4 169 aa10.32□□□□□ -0.76
NEK3-205ENST00000610828 OR5AL1P0C617 328 aa10.32□□□□□ -0.76
NEK3-205ENST00000610828 SYS1-DBNDD2H3BUS1 97 aa10.31□□□□□ -0.76
NEK3-205ENST00000610828 NCR2O95944 276 aa10.31□□□□□ -0.76
NEK3-205ENST00000610828 SIGLEC8Q9NYZ4 499 aa10.31□□□□□ -0.76
NEK3-205ENST00000610828 TMEM89A2RUT3 159 aa10.31□□□□□ -0.76
NEK3-205ENST00000610828 DUX5Q96PT3 197 aa10.31□□□□□ -0.76
NEK3-205ENST00000610828 ZNF702PQ9H963 129 aa10.31□□□□□ -0.76
NEK3-205ENST00000610828 UFC1Q9Y3C8 167 aa10.31□□□□□ -0.76
NEK3-205ENST00000610828 PRRC2AP48634 2157 aaKnown RBP10.3□□□□□ -0.76
NEK3-205ENST00000610828 CRXO43186 299 aaPredicted RBP10.3□□□□□ -0.76
NEK3-205ENST00000610828 CYB5R2Q6BCY4 276 aa10.3□□□□□ -0.76
NEK3-205ENST00000610828 PRSS57Q6UWY2 283 aa10.3□□□□□ -0.76
NEK3-205ENST00000610828 WFDC3Q8IUB2 231 aa10.3□□□□□ -0.76
NEK3-205ENST00000610828 OR10AG1Q8NH19 301 aa10.3□□□□□ -0.76
NEK3-205ENST00000610828 MAP1LC3CQ9BXW4 147 aa10.3□□□□□ -0.76
NEK3-205ENST00000610828 HSPB8Q9UJY1 196 aa10.3□□□□□ -0.76
NEK3-205ENST00000610828 H0Y8G0 127 aa10.3□□□□□ -0.76
NEK3-205ENST00000610828 NPYP01303 97 aa10.3□□□□□ -0.76
NEK3-205ENST00000610828 NUTF2P61970 127 aaKnown RBP10.3□□□□□ -0.76
NEK3-205ENST00000610828 ZFAND2AQ8N6M9 145 aa10.3□□□□□ -0.76
NEK3-205ENST00000610828 OR8A1Q8NGG7 326 aa10.3□□□□□ -0.76
NEK3-205ENST00000610828 RNF185Q96GF1 192 aa10.3□□□□□ -0.76
NEK3-205ENST00000610828 KRTAP1-3Q8IUG1 177 aa10.29□□□□□ -0.76
NEK3-205ENST00000610828 OR4C46A6NHA9 309 aa10.29□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 119.5 ms