RNA–Protein interactions for RNA: ENST00000606785.1

LINC00397-202, long intergenic non-protein coding RNA 397, humanhuman

TSL 5 BASIC

Gene LINC00397, Length 409 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00397-202ENST00000606785 AMELYQ99218 206 aa2.99□□□□□ -1.93
LINC00397-202ENST00000606785 SHANK2-AS3Q9BTD1 123 aa2.99□□□□□ -1.93
LINC00397-202ENST00000606785 SLC39A9Q9NUM3 307 aa2.99□□□□□ -1.93
LINC00397-202ENST00000606785 CKLFQ9UBR5 152 aa2.99□□□□□ -1.93
LINC00397-202ENST00000606785 ZNF835Q9Y2P0 537 aa2.99□□□□□ -1.93
LINC00397-202ENST00000606785 DNAJC15Q9Y5T4 150 aa2.99□□□□□ -1.93
LINC00397-202ENST00000606785 EIF2AK4Q9P2K8 1649 aaKnown RBP2.99□□□□□ -1.93
LINC00397-202ENST00000606785 TICRRQ7Z2Z1 1910 aa2.99□□□□□ -1.93
LINC00397-202ENST00000606785 PLXNB3Q9ULL4 1909 aa2.99□□□□□ -1.93
LINC00397-202ENST00000606785 MAST1Q9Y2H9 1570 aa2.99□□□□□ -1.93
LINC00397-202ENST00000606785 NLRC5Q86WI3 1866 aa2.99□□□□□ -1.93
LINC00397-202ENST00000606785 TRPM2O94759 1503 aa2.98□□□□□ -1.93
LINC00397-202ENST00000606785 SIPA1L3O60292 1781 aaPredicted RBP2.98□□□□□ -1.93
LINC00397-202ENST00000606785 TRAV9-1A0A075B6T8 112 aa2.98□□□□□ -1.93
LINC00397-202ENST00000606785 IGHV1-45A0A0A0MS14 117 aa2.98□□□□□ -1.93
LINC00397-202ENST00000606785 TRGV5A0A0B4J1U4 118 aa2.98□□□□□ -1.93
LINC00397-202ENST00000606785 IGHV3-43A0A0B4J1X8 118 aa2.98□□□□□ -1.93
LINC00397-202ENST00000606785 RBAKDNA6NC62 111 aa2.98□□□□□ -1.93
LINC00397-202ENST00000606785 DPRXA6NFQ7 191 aa2.98□□□□□ -1.93
LINC00397-202ENST00000606785 A8MUU9 505 aa2.98□□□□□ -1.93
LINC00397-202ENST00000606785 SSSCA1O60232 199 aa2.98□□□□□ -1.93
LINC00397-202ENST00000606785 ZNF737O75373 536 aa2.98□□□□□ -1.93
LINC00397-202ENST00000606785 IGKV3-11P04433 115 aa2.98□□□□□ -1.93
LINC00397-202ENST00000606785 GYPBP06028 91 aa2.98□□□□□ -1.93
LINC00397-202ENST00000606785 HLA-DRB4P13762 266 aa2.98□□□□□ -1.93
LINC00397-202ENST00000606785 ZNF32P17041 273 aa2.98□□□□□ -1.93
LINC00397-202ENST00000606785 CBLN1P23435 193 aa2.98□□□□□ -1.93
LINC00397-202ENST00000606785 MP68P56378 58 aa2.98□□□□□ -1.93
LINC00397-202ENST00000606785 MOBPQ13875 183 aa2.98□□□□□ -1.93
LINC00397-202ENST00000606785 WFDC2Q14508 124 aa2.98□□□□□ -1.93
LINC00397-202ENST00000606785 CDK5R1Q15078 307 aa2.98□□□□□ -1.93
LINC00397-202ENST00000606785 MPV17LQ2QL34 196 aa2.98□□□□□ -1.93
LINC00397-202ENST00000606785 NMSQ5H8A3 153 aa2.98□□□□□ -1.93
LINC00397-202ENST00000606785 LCE3EQ5T5B0 92 aa2.98□□□□□ -1.93
LINC00397-202ENST00000606785 LAIR2Q6ISS4 152 aa2.98□□□□□ -1.93
LINC00397-202ENST00000606785 C16orf47Q6ZP98 133 aaPredicted RBP2.98□□□□□ -1.93
LINC00397-202ENST00000606785 Q6ZS49 121 aa2.98□□□□□ -1.93
LINC00397-202ENST00000606785 TEN1Q86WV5 123 aa2.98□□□□□ -1.93
LINC00397-202ENST00000606785 LINC00527Q9UJ94 153 aa2.98□□□□□ -1.93
LINC00397-202ENST00000606785 COQ4Q9Y3A0 265 aa2.98□□□□□ -1.93
LINC00397-202ENST00000606785 HLA-DRB4X5D2U9 266 aa2.98□□□□□ -1.93
LINC00397-202ENST00000606785 TRPM7Q96QT4 1865 aa2.98□□□□□ -1.93
LINC00397-202ENST00000606785 DLC1Q96QB1 1528 aa2.98□□□□□ -1.93
LINC00397-202ENST00000606785 CLTCQ00610 1675 aaKnown RBP2.98□□□□□ -1.93
LINC00397-202ENST00000606785 PREX1Q8TCU6 1659 aa2.98□□□□□ -1.93
LINC00397-202ENST00000606785 PATJQ8NI35 1801 aa2.98□□□□□ -1.93
LINC00397-202ENST00000606785 ARFGEF2Q9Y6D5 1785 aa2.97□□□□□ -1.93
LINC00397-202ENST00000606785 NUP188Q5SRE5 1749 aa2.97□□□□□ -1.93
LINC00397-202ENST00000606785 IGHV3OR16-8A0A075B7F1 116 aa2.97□□□□□ -1.93
LINC00397-202ENST00000606785 TRBV7-7A0A0K0K1E9 115 aa2.97□□□□□ -1.93
LINC00397-202ENST00000606785 C16orf90A8MZG2 172 aa2.97□□□□□ -1.93
LINC00397-202ENST00000606785 IGLL5B9A064 214 aa2.97□□□□□ -1.93
LINC00397-202ENST00000606785 NDUFB3O43676 98 aa2.97□□□□□ -1.93
LINC00397-202ENST00000606785 SYNGR2O43760 224 aa2.97□□□□□ -1.93
LINC00397-202ENST00000606785 IGLV7-43P04211 117 aa2.97□□□□□ -1.93
LINC00397-202ENST00000606785 COX6A1P12074 109 aa2.97□□□□□ -1.93
LINC00397-202ENST00000606785 PTHLHP12272 177 aa2.97□□□□□ -1.93
LINC00397-202ENST00000606785 LGALS3P17931 250 aaKnown RBP2.97□□□□□ -1.93
LINC00397-202ENST00000606785 NPC2P61916 151 aa2.97□□□□□ -1.93
LINC00397-202ENST00000606785 MRPS36P82909 103 aaKnown RBP2.97□□□□□ -1.93
LINC00397-202ENST00000606785 IGFBP7Q16270 282 aa2.97□□□□□ -1.93
LINC00397-202ENST00000606785 TMEM91Q6ZNR0 172 aa2.97□□□□□ -1.93
LINC00397-202ENST00000606785 RPP25LQ8N5L8 163 aaKnown RBP2.97□□□□□ -1.93
LINC00397-202ENST00000606785 TMEM75Q8N9X5 138 aa2.97□□□□□ -1.93
LINC00397-202ENST00000606785 C15orf53Q8NAA6 179 aa2.97□□□□□ -1.93
LINC00397-202ENST00000606785 FAM213BQ8TBF2 198 aa2.97□□□□□ -1.93
LINC00397-202ENST00000606785 MRPL30Q8TCC3 161 aaKnown RBP2.97□□□□□ -1.93
LINC00397-202ENST00000606785 LSM10Q969L4 123 aaKnown RBP2.97□□□□□ -1.93
LINC00397-202ENST00000606785 RGPD2P0DJD1 1756 aa2.97□□□□□ -1.93
LINC00397-202ENST00000606785 IGHV3-21A0A0B4J1V1 117 aa2.96□□□□□ -1.94
LINC00397-202ENST00000606785 TRAV41A0A0B4J266 112 aa2.96□□□□□ -1.94
LINC00397-202ENST00000606785 K7ERS5 55 aa2.96□□□□□ -1.94
LINC00397-202ENST00000606785 SMIM13P0DJ93 91 aa2.96□□□□□ -1.94
LINC00397-202ENST00000606785 FAUP35544 74 aaKnown RBP2.96□□□□□ -1.94
LINC00397-202ENST00000606785 SPATA12Q7Z6I5 190 aa2.96□□□□□ -1.94
LINC00397-202ENST00000606785 AMN1Q8IY45 258 aa2.96□□□□□ -1.94
LINC00397-202ENST00000606785 TOMM5Q8N4H5 51 aa2.96□□□□□ -1.94
LINC00397-202ENST00000606785 C3orf56Q8N813 242 aa2.96□□□□□ -1.94
LINC00397-202ENST00000606785 DCANP1Q8TF63 244 aa2.96□□□□□ -1.94
LINC00397-202ENST00000606785 SCRT1Q9BWW7 348 aa2.96□□□□□ -1.94
LINC00397-202ENST00000606785 CYTL1Q9NRR1 136 aa2.96□□□□□ -1.94
LINC00397-202ENST00000606785 AGLP35573 1532 aa2.96□□□□□ -1.94
LINC00397-202ENST00000606785 KIF21BO75037 1637 aa2.96□□□□□ -1.94
LINC00397-202ENST00000606785 MAP3K4Q9Y6R4 1608 aa2.96□□□□□ -1.94
LINC00397-202ENST00000606785 KIDINS220Q9ULH0 1771 aa2.95□□□□□ -1.94
LINC00397-202ENST00000606785 TRBV20OR9-2A0A075B6H5 130 aa2.95□□□□□ -1.94
LINC00397-202ENST00000606785 TRBV27A0A0K0K1C4 114 aa2.95□□□□□ -1.94
LINC00397-202ENST00000606785 C4orf51C9J302 202 aa2.95□□□□□ -1.94
LINC00397-202ENST00000606785 M0R378 163 aa2.95□□□□□ -1.94
LINC00397-202ENST00000606785 M0R381 172 aa2.95□□□□□ -1.94
LINC00397-202ENST00000606785 ZNF73O43830 326 aaPredicted RBP2.95□□□□□ -1.94
LINC00397-202ENST00000606785 KRTDAPP60985 99 aa2.95□□□□□ -1.94
LINC00397-202ENST00000606785 TMEM136Q6ZRR5 245 aa2.95□□□□□ -1.94
LINC00397-202ENST00000606785 LCA10Q71F78 164 aa2.95□□□□□ -1.94
LINC00397-202ENST00000606785 HMGN2P46Q86SG4 172 aa2.95□□□□□ -1.94
LINC00397-202ENST00000606785 MYOZ3Q8TDC0 251 aa2.95□□□□□ -1.94
LINC00397-202ENST00000606785 ZNF721Q8TF20 911 aa2.95□□□□□ -1.94
LINC00397-202ENST00000606785 TOMM6Q96B49 74 aa2.95□□□□□ -1.94
LINC00397-202ENST00000606785 CCL13Q99616 98 aa2.95□□□□□ -1.94
LINC00397-202ENST00000606785 CST11Q9H112 138 aa2.95□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 122 ms