RNA–Protein interactions for RNA: ENST00000583988.1

PPP4R1-227, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

TSL 3

Gene PPP4R1, Length 582 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-227ENST00000583988 HBDP02042 147 aa0.66□□□□□ -2.3
PPP4R1-227ENST00000583988 CD14P08571 375 aa0.66□□□□□ -2.3
PPP4R1-227ENST00000583988 NBEAP1P0C6P0 100 aa0.66□□□□□ -2.3
PPP4R1-227ENST00000583988 PDE6GP18545 87 aa0.66□□□□□ -2.3
PPP4R1-227ENST00000583988 RPS3P23396 243 aaKnown RBP eCLIP0.66□□□□□ -2.3
PPP4R1-227ENST00000583988 GTF2A1P52655 376 aaPredicted RBP0.66□□□□□ -2.3
PPP4R1-227ENST00000583988 FOXA3P55318 350 aaPredicted RBP0.66□□□□□ -2.3
PPP4R1-227ENST00000583988 FXYD6P3P58550 94 aa0.66□□□□□ -2.3
PPP4R1-227ENST00000583988 BLCAPP62952 87 aa0.66□□□□□ -2.3
PPP4R1-227ENST00000583988 CCDC153Q494R4 210 aa0.66□□□□□ -2.3
PPP4R1-227ENST00000583988 Q6ZQY7 126 aa0.66□□□□□ -2.3
PPP4R1-227ENST00000583988 SBSPONQ8IVN8 264 aa0.66□□□□□ -2.3
PPP4R1-227ENST00000583988 C10orf111Q8N326 155 aa0.66□□□□□ -2.3
PPP4R1-227ENST00000583988 TET1Q8NFU7 2136 aa0.66□□□□□ -2.3
PPP4R1-227ENST00000583988 OR8J3Q8NGG0 315 aa0.66□□□□□ -2.3
PPP4R1-227ENST00000583988 MAGOHBQ96A72 148 aaKnown RBP0.66□□□□□ -2.3
PPP4R1-227ENST00000583988 NABP2Q9BQ15 211 aa0.66□□□□□ -2.3
PPP4R1-227ENST00000583988 NIT2Q9NQR4 276 aa0.66□□□□□ -2.3
PPP4R1-227ENST00000583988 C19orf12Q9NSK7 152 aa0.66□□□□□ -2.3
PPP4R1-227ENST00000583988 FKBP11Q9NYL4 201 aa0.66□□□□□ -2.3
PPP4R1-227ENST00000583988 CALML5Q9NZT1 146 aa0.66□□□□□ -2.3
PPP4R1-227ENST00000583988 PHRF1Q9P1Y6 1649 aaKnown RBP0.66□□□□□ -2.3
PPP4R1-227ENST00000583988 MED23Q9ULK4 1368 aa0.66□□□□□ -2.3
PPP4R1-227ENST00000583988 NINQ8N4C6 2090 aa0.66□□□□□ -2.3
PPP4R1-227ENST00000583988 SPTBP11277 2137 aa0.65□□□□□ -2.3
PPP4R1-227ENST00000583988 FAM135BQ49AJ0 1406 aa0.65□□□□□ -2.3
PPP4R1-227ENST00000583988 FGD6Q6ZV73 1430 aa0.65□□□□□ -2.3
PPP4R1-227ENST00000583988 TRAV36DV7A0A075B6V5 113 aa0.65□□□□□ -2.31
PPP4R1-227ENST00000583988 TRBV30A0A0K0K1B3 111 aa0.65□□□□□ -2.31
PPP4R1-227ENST00000583988 A0A1B0GX51 115 aa0.65□□□□□ -2.31
PPP4R1-227ENST00000583988 ZNF727A8MUV8 499 aa0.65□□□□□ -2.31
PPP4R1-227ENST00000583988 DEGS1O15121 323 aa0.65□□□□□ -2.31
PPP4R1-227ENST00000583988 IGHV3-30P01768 117 aa0.65□□□□□ -2.31
PPP4R1-227ENST00000583988 GYPBP06028 91 aa0.65□□□□□ -2.31
PPP4R1-227ENST00000583988 DBIP07108 87 aaKnown RBP0.65□□□□□ -2.31
PPP4R1-227ENST00000583988 IGHV3-30-5P0DP03 117 aa0.65□□□□□ -2.31
PPP4R1-227ENST00000583988 SLC25A4P12235 298 aa0.65□□□□□ -2.31
PPP4R1-227ENST00000583988 HIST1H1BP16401 226 aaKnown RBP0.65□□□□□ -2.31
PPP4R1-227ENST00000583988 CKS2P33552 79 aa0.65□□□□□ -2.31
PPP4R1-227ENST00000583988 RPL37AP61513 92 aaKnown RBP0.65□□□□□ -2.31
PPP4R1-227ENST00000583988 SNRPD3P62318 126 aaKnown RBP0.65□□□□□ -2.31
PPP4R1-227ENST00000583988 ASB16-AS1Q495Z4 193 aa0.65□□□□□ -2.31
PPP4R1-227ENST00000583988 LPAR5Q9H1C0 372 aa0.65□□□□□ -2.31
PPP4R1-227ENST00000583988 KIAA1549LQ6ZVL6 1849 aa0.65□□□□□ -2.31
PPP4R1-227ENST00000583988 ANKRD30AQ9BXX3 1397 aa0.65□□□□□ -2.31
PPP4R1-227ENST00000583988 USP54Q70EL1 1684 aa0.65□□□□□ -2.31
PPP4R1-227ENST00000583988 DSPPQ9NZW4 1301 aa0.64□□□□□ -2.31
PPP4R1-227ENST00000583988 TMEM189A5PLL7 270 aa0.64□□□□□ -2.31
PPP4R1-227ENST00000583988 SMIM24O75264 130 aa0.64□□□□□ -2.31
PPP4R1-227ENST00000583988 PAEPP09466 180 aa0.64□□□□□ -2.31
PPP4R1-227ENST00000583988 SCGB1A1P11684 91 aa0.64□□□□□ -2.31
PPP4R1-227ENST00000583988 CCL4P13236 92 aa0.64□□□□□ -2.31
PPP4R1-227ENST00000583988 CMPK1P30085 196 aa0.64□□□□□ -2.31
PPP4R1-227ENST00000583988 FXYD4P59646 89 aa0.64□□□□□ -2.31
PPP4R1-227ENST00000583988 PCBD1P61457 104 aa0.64□□□□□ -2.31
PPP4R1-227ENST00000583988 OR8B8Q15620 311 aa0.64□□□□□ -2.31
PPP4R1-227ENST00000583988 HSD17B12Q53GQ0 312 aa0.64□□□□□ -2.31
PPP4R1-227ENST00000583988 IDO2Q6ZQW0 420 aa0.64□□□□□ -2.31
PPP4R1-227ENST00000583988 Q6ZS92 163 aa0.64□□□□□ -2.31
PPP4R1-227ENST00000583988 TCTE3Q8IZS6 198 aa0.64□□□□□ -2.31
PPP4R1-227ENST00000583988 ANP32BQ92688 251 aaKnown RBP0.64□□□□□ -2.31
PPP4R1-227ENST00000583988 LIMD2Q9BT23 127 aa0.64□□□□□ -2.31
PPP4R1-227ENST00000583988 ANK1P16157 1881 aa0.63□□□□□ -2.31
PPP4R1-227ENST00000583988 IGHV1-24A0A0C4DH33 117 aa0.63□□□□□ -2.31
PPP4R1-227ENST00000583988 TMEM30CPA0ZSE6 113 aa0.63□□□□□ -2.31
PPP4R1-227ENST00000583988 A6NN06 94 aa0.63□□□□□ -2.31
PPP4R1-227ENST00000583988 SCTP09683 121 aa0.63□□□□□ -2.31
PPP4R1-227ENST00000583988 CITO14578 2027 aa0.63□□□□□ -2.31
PPP4R1-227ENST00000583988 MYH1P12882 1939 aa0.63□□□□□ -2.31
PPP4R1-227ENST00000583988 SIPA1L2Q9P2F8 1722 aaPredicted RBP0.63□□□□□ -2.31
PPP4R1-227ENST00000583988 XIRP1Q702N8 1843 aaKnown RBP0.62□□□□□ -2.31
PPP4R1-227ENST00000583988 NUPR2A6NF83 97 aa0.62□□□□□ -2.31
PPP4R1-227ENST00000583988 YPEL1O60688 119 aa0.62□□□□□ -2.31
PPP4R1-227ENST00000583988 TCRAP04437 139 aa0.62□□□□□ -2.31
PPP4R1-227ENST00000583988 SLC25A5P05141 298 aaKnown RBP0.62□□□□□ -2.31
PPP4R1-227ENST00000583988 SPINK9Q5DT21 86 aa0.62□□□□□ -2.31
PPP4R1-227ENST00000583988 KRTAP19-3Q7Z4W3 81 aa0.62□□□□□ -2.31
PPP4R1-227ENST00000583988 Q86TA4 180 aa0.62□□□□□ -2.31
PPP4R1-227ENST00000583988 ATOH7Q8N100 152 aa0.62□□□□□ -2.31
PPP4R1-227ENST00000583988 OTOSQ8NHW6 89 aa0.62□□□□□ -2.31
PPP4R1-227ENST00000583988 BATF3Q9NR55 127 aa0.62□□□□□ -2.31
PPP4R1-227ENST00000583988 MRPL35Q9NZE8 188 aaKnown RBP0.62□□□□□ -2.31
PPP4R1-227ENST00000583988 METTL1Q9UBP6 276 aaKnown RBP0.62□□□□□ -2.31
PPP4R1-227ENST00000583988 C9JAW5 83 aa0.61□□□□□ -2.31
PPP4R1-227ENST00000583988 TPST1O60507 370 aa0.61□□□□□ -2.31
PPP4R1-227ENST00000583988 TNFSF15O95150 251 aa0.61□□□□□ -2.31
PPP4R1-227ENST00000583988 OR2H2O95918 312 aa0.61□□□□□ -2.31
PPP4R1-227ENST00000583988 IGF2P01344 180 aa0.61□□□□□ -2.31
PPP4R1-227ENST00000583988 SDC4P31431 198 aa0.61□□□□□ -2.31
PPP4R1-227ENST00000583988 CAV3P56539 151 aa0.61□□□□□ -2.31
PPP4R1-227ENST00000583988 PLGLB1Q02325 96 aa0.61□□□□□ -2.31
PPP4R1-227ENST00000583988 RHOHQ15669 191 aa0.61□□□□□ -2.31
PPP4R1-227ENST00000583988 XAF1Q6GPH4 301 aa0.61□□□□□ -2.31
PPP4R1-227ENST00000583988 UNQ5815/PRO19632Q6UWF5 114 aa0.61□□□□□ -2.31
PPP4R1-227ENST00000583988 OR4S1Q8NGB4 309 aa0.61□□□□□ -2.31
PPP4R1-227ENST00000583988 LZICQ8WZA0 190 aa0.61□□□□□ -2.31
PPP4R1-227ENST00000583988 CCL19Q99731 98 aa0.61□□□□□ -2.31
PPP4R1-227ENST00000583988 VPS25Q9BRG1 176 aa0.61□□□□□ -2.31
PPP4R1-227ENST00000583988 SLC35B3Q9H1N7 401 aa0.61□□□□□ -2.31
PPP4R1-227ENST00000583988 BANF2Q9H503 90 aa0.61□□□□□ -2.31
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms