RNA–Protein interactions for RNA: ENST00000581761.5

MKS1-211, Transcript of Meckel syndrome, type 1, humanhuman

TSL 3

Gene MKS1, Length 812 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-211ENST00000581761 HLA-DQA1P01909 254 aa11.05□□□□□ -0.64
MKS1-211ENST00000581761 ZNF80P51504 273 aaPredicted RBP11.05□□□□□ -0.64
MKS1-211ENST00000581761 RASL11AQ6T310 242 aa11.05□□□□□ -0.64
MKS1-211ENST00000581761 RBPMS2Q6ZRY4 209 aaKnown RBP11.05□□□□□ -0.64
MKS1-211ENST00000581761 ATP5L2Q7Z4Y8 100 aa11.05□□□□□ -0.64
MKS1-211ENST00000581761 OR10J6PQ8NGY7 276 aa11.05□□□□□ -0.64
MKS1-211ENST00000581761 WIPF2Q8TF74 440 aaPredicted RBP11.05□□□□□ -0.64
MKS1-211ENST00000581761 TMSB15BA0A087X1C1 80 aa11.04□□□□□ -0.64
MKS1-211ENST00000581761 CD28P10747 220 aa11.04□□□□□ -0.64
MKS1-211ENST00000581761 HIST2H2BDQ6DRA6 164 aa11.04□□□□□ -0.64
MKS1-211ENST00000581761 A0A1B0GXF2 115 aa11.03□□□□□ -0.64
MKS1-211ENST00000581761 ZNF705DP0CH99 300 aaPredicted RBP11.03□□□□□ -0.64
MKS1-211ENST00000581761 ZNF705BP0CI00 300 aaPredicted RBP11.03□□□□□ -0.64
MKS1-211ENST00000581761 TFPI2P48307 235 aa11.03□□□□□ -0.64
MKS1-211ENST00000581761 RPS20P60866 119 aaKnown RBP11.03□□□□□ -0.64
MKS1-211ENST00000581761 HIST1H1AQ02539 215 aaPredicted RBP11.03□□□□□ -0.64
MKS1-211ENST00000581761 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP11.03□□□□□ -0.64
MKS1-211ENST00000581761 C11orf44Q8N8P7 122 aa11.03□□□□□ -0.64
MKS1-211ENST00000581761 LINC01006Q8NI28 216 aa11.03□□□□□ -0.64
MKS1-211ENST00000581761 WFDC12Q8WWY7 111 aa11.03□□□□□ -0.64
MKS1-211ENST00000581761 DUX3Q96PT4 197 aa11.03□□□□□ -0.64
MKS1-211ENST00000581761 MS4A6AQ9H2W1 248 aa11.03□□□□□ -0.64
MKS1-211ENST00000581761 PPP1R14DQ9NXH3 145 aa11.03□□□□□ -0.64
MKS1-211ENST00000581761 PEMTQ9UBM1 199 aa11.03□□□□□ -0.64
MKS1-211ENST00000581761 NBEAL1Q6ZS30 2694 aa11.02□□□□□ -0.64
MKS1-211ENST00000581761 FABP5P3A8MUU1 101 aa11.02□□□□□ -0.65
MKS1-211ENST00000581761 NDUFA7O95182 113 aa11.02□□□□□ -0.65
MKS1-211ENST00000581761 APCSP02743 223 aa11.02□□□□□ -0.65
MKS1-211ENST00000581761 CAMPP49913 170 aa11.02□□□□□ -0.65
MKS1-211ENST00000581761 DEFB1P60022 68 aa11.02□□□□□ -0.65
MKS1-211ENST00000581761 HBBP68871 147 aa11.02□□□□□ -0.65
MKS1-211ENST00000581761 GDF5OSQ5U4N7 250 aa11.02□□□□□ -0.65
MKS1-211ENST00000581761 GFI1BQ5VTD9 330 aa11.02□□□□□ -0.65
MKS1-211ENST00000581761 OR8A1Q8NGG7 326 aa11.02□□□□□ -0.65
MKS1-211ENST00000581761 DCANP1Q8TF63 244 aa11.02□□□□□ -0.65
MKS1-211ENST00000581761 LINC00477Q96M19 166 aa11.02□□□□□ -0.65
MKS1-211ENST00000581761 A0A1W2PRX2 142 aa11.01□□□□□ -0.65
MKS1-211ENST00000581761 HAX1O00165 279 aa11.01□□□□□ -0.65
MKS1-211ENST00000581761 FOXA3P55318 350 aaPredicted RBP11.01□□□□□ -0.65
MKS1-211ENST00000581761 COA6Q5JTJ3 125 aaKnown RBP11.01□□□□□ -0.65
MKS1-211ENST00000581761 Q6AWC8 147 aa11.01□□□□□ -0.65
MKS1-211ENST00000581761 HIST3H2BBQ8N257 126 aa11.01□□□□□ -0.65
MKS1-211ENST00000581761 OR9G4Q8NGQ1 327 aa11.01□□□□□ -0.65
MKS1-211ENST00000581761 BORCS7Q96B45 105 aa11.01□□□□□ -0.65
MKS1-211ENST00000581761 LENEPQ9Y5L5 61 aa11.01□□□□□ -0.65
MKS1-211ENST00000581761 F6UB75 175 aa11□□□□□ -0.65
MKS1-211ENST00000581761 K7EQG2 157 aa11□□□□□ -0.65
MKS1-211ENST00000581761 ORM1P02763 201 aa11□□□□□ -0.65
MKS1-211ENST00000581761 RIGQ13278 110 aa11□□□□□ -0.65
MKS1-211ENST00000581761 KIAA1644Q3SXP7 199 aa11□□□□□ -0.65
MKS1-211ENST00000581761 PDZD11Q5EBL8 140 aa11□□□□□ -0.65
MKS1-211ENST00000581761 ADAMTSL5Q6ZMM2 481 aa11□□□□□ -0.65
MKS1-211ENST00000581761 TPPP3Q9BW30 176 aa11□□□□□ -0.65
MKS1-211ENST00000581761 TSSC4Q9Y5U2 329 aaPredicted RBP11□□□□□ -0.65
MKS1-211ENST00000581761 A0A1B0GUT8 65 aa10.99□□□□□ -0.65
MKS1-211ENST00000581761 GRIFINA4D1Z8 144 aa10.99□□□□□ -0.65
MKS1-211ENST00000581761 CRISP2P16562 243 aa10.99□□□□□ -0.65
MKS1-211ENST00000581761 S100A2P29034 98 aa10.99□□□□□ -0.65
MKS1-211ENST00000581761 LINC01559Q495D7 138 aa10.99□□□□□ -0.65
MKS1-211ENST00000581761 DLX4Q92988 240 aaPredicted RBP10.99□□□□□ -0.65
MKS1-211ENST00000581761 RAX2Q96IS3 184 aa10.99□□□□□ -0.65
MKS1-211ENST00000581761 CITED2Q99967 270 aaPredicted RBP10.99□□□□□ -0.65
MKS1-211ENST00000581761 J3KRW8 73 aa10.98□□□□□ -0.65
MKS1-211ENST00000581761 S100A8P05109 93 aa10.98□□□□□ -0.65
MKS1-211ENST00000581761 CSN3P07498 182 aa10.98□□□□□ -0.65
MKS1-211ENST00000581761 ARMS2P0C7Q2 107 aa10.98□□□□□ -0.65
MKS1-211ENST00000581761 ZNF688P0C7X2 276 aa10.98□□□□□ -0.65
MKS1-211ENST00000581761 SNRPD3P62318 126 aaKnown RBP10.98□□□□□ -0.65
MKS1-211ENST00000581761 PAFAH1B2P68402 229 aa10.98□□□□□ -0.65
MKS1-211ENST00000581761 SLAQ13239 276 aa10.98□□□□□ -0.65
MKS1-211ENST00000581761 PSMG4Q5JS54 123 aa10.98□□□□□ -0.65
MKS1-211ENST00000581761 PRR9Q5T870 116 aa10.98□□□□□ -0.65
MKS1-211ENST00000581761 LYZL1Q6UWQ5 148 aa10.98□□□□□ -0.65
MKS1-211ENST00000581761 DYNLRB2Q8TF09 96 aa10.98□□□□□ -0.65
MKS1-211ENST00000581761 SSBP4Q9BWG4 385 aaPredicted RBP10.98□□□□□ -0.65
MKS1-211ENST00000581761 RNF114Q9Y508 228 aa10.98□□□□□ -0.65
MKS1-211ENST00000581761 A0A1B0GW15 77 aa10.97□□□□□ -0.65
MKS1-211ENST00000581761 IFITM10A6NMD0 228 aa10.97□□□□□ -0.65
MKS1-211ENST00000581761 SRIP30626 198 aa10.97□□□□□ -0.65
MKS1-211ENST00000581761 C12orf54Q6X4T0 127 aa10.97□□□□□ -0.65
MKS1-211ENST00000581761 FER1L6-AS1Q8NA97 138 aa10.97□□□□□ -0.65
MKS1-211ENST00000581761 A0A1B0GUS0 222 aa10.96□□□□□ -0.65
MKS1-211ENST00000581761 CCL24O00175 119 aa10.96□□□□□ -0.65
MKS1-211ENST00000581761 IGLC6P0CF74 106 aa10.96□□□□□ -0.65
MKS1-211ENST00000581761 FHL3Q13643 280 aa10.96□□□□□ -0.65
MKS1-211ENST00000581761 PRR31Q5SQ13 230 aa10.96□□□□□ -0.65
MKS1-211ENST00000581761 ZFAND2AQ8N6M9 145 aa10.96□□□□□ -0.65
MKS1-211ENST00000581761 FAM19A4Q96LR4 140 aa10.96□□□□□ -0.65
MKS1-211ENST00000581761 IGKV3D-20A0A0C4DH25 116 aa10.95□□□□□ -0.66
MKS1-211ENST00000581761 TRBV7-9A0A0J9YWB2 115 aa10.95□□□□□ -0.66
MKS1-211ENST00000581761 GPX1P07203 203 aa10.95□□□□□ -0.66
MKS1-211ENST00000581761 FABP4P15090 132 aa10.95□□□□□ -0.66
MKS1-211ENST00000581761 CD33P20138 364 aa10.95□□□□□ -0.66
MKS1-211ENST00000581761 CTRLP40313 264 aa10.95□□□□□ -0.66
MKS1-211ENST00000581761 Q0VG73 95 aa10.95□□□□□ -0.66
MKS1-211ENST00000581761 BAGE3Q86Y29 109 aa10.95□□□□□ -0.66
MKS1-211ENST00000581761 C11orf21Q9P2W6 132 aa10.95□□□□□ -0.66
MKS1-211ENST00000581761 TRAV2A0A0B4J234 112 aa10.94□□□□□ -0.66
MKS1-211ENST00000581761 TRAV21A0A0B4J279 112 aa10.94□□□□□ -0.66
MKS1-211ENST00000581761 RNASE4P34096 147 aaKnown RBP10.94□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 140.1 ms