RNA–Protein interactions for RNA: ENST00000581711.1

SMCHD1-207, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 4

Gene SMCHD1, Length 546 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-207ENST00000581711 FABP4P15090 132 aa0.19□□□□□ -2.38
SMCHD1-207ENST00000581711 SERPINB1P30740 379 aa0.19□□□□□ -2.38
SMCHD1-207ENST00000581711 FOXA3P55318 350 aaPredicted RBP0.19□□□□□ -2.38
SMCHD1-207ENST00000581711 FXYD6P3P58550 94 aa0.19□□□□□ -2.38
SMCHD1-207ENST00000581711 MRPS36P82909 103 aaKnown RBP0.19□□□□□ -2.38
SMCHD1-207ENST00000581711 VMA21Q3ZAQ7 101 aa0.19□□□□□ -2.38
SMCHD1-207ENST00000581711 C3orf33Q6P1S2 294 aa0.19□□□□□ -2.38
SMCHD1-207ENST00000581711 Q6ZQY7 126 aa0.19□□□□□ -2.38
SMCHD1-207ENST00000581711 Q6ZS92 163 aa0.19□□□□□ -2.38
SMCHD1-207ENST00000581711 PRR15Q8IV56 129 aa0.19□□□□□ -2.38
SMCHD1-207ENST00000581711 LINC00269Q8N2A0 174 aa0.19□□□□□ -2.38
SMCHD1-207ENST00000581711 OR4B1Q8NGF8 309 aa0.19□□□□□ -2.38
SMCHD1-207ENST00000581711 DYDC1Q8WWB3 177 aa0.19□□□□□ -2.38
SMCHD1-207ENST00000581711 ISOC1Q96CN7 298 aa0.19□□□□□ -2.38
SMCHD1-207ENST00000581711 BORCS8Q96FH0 119 aa0.19□□□□□ -2.38
SMCHD1-207ENST00000581711 MCEEQ96PE7 176 aa0.19□□□□□ -2.38
SMCHD1-207ENST00000581711 OR4C12Q96R67 309 aa0.19□□□□□ -2.38
SMCHD1-207ENST00000581711 HOPXQ9BPY8 73 aaPredicted RBP0.19□□□□□ -2.38
SMCHD1-207ENST00000581711 EFCAB11Q9BUY7 163 aa0.19□□□□□ -2.38
SMCHD1-207ENST00000581711 BOLA2Q9H3K6 86 aa0.19□□□□□ -2.38
SMCHD1-207ENST00000581711 OTORQ9NRC9 128 aa0.19□□□□□ -2.38
SMCHD1-207ENST00000581711 GID8Q9NWU2 228 aa0.19□□□□□ -2.38
SMCHD1-207ENST00000581711 NAT8BQ9UHF3 227 aa0.19□□□□□ -2.38
SMCHD1-207ENST00000581711 NUBP2Q9Y5Y2 271 aa0.19□□□□□ -2.38
SMCHD1-207ENST00000581711 KNTC1P50748 2209 aa0.19□□□□□ -2.38
SMCHD1-207ENST00000581711 KIAA1549LQ6ZVL6 1849 aa0.19□□□□□ -2.38
SMCHD1-207ENST00000581711 KIAA1107Q9UPP5 1409 aa0.19□□□□□ -2.38
SMCHD1-207ENST00000581711 FAT3Q8TDW7 4589 aa0.19□□□□□ -2.38
SMCHD1-207ENST00000581711 SYNMO15061 1565 aa0.19□□□□□ -2.38
SMCHD1-207ENST00000581711 BCORL1Q5H9F3 1711 aa0.18□□□□□ -2.38
SMCHD1-207ENST00000581711 UNC80Q8N2C7 3258 aa0.18□□□□□ -2.38
SMCHD1-207ENST00000581711 A0A0J9YY99 117 aa0.18□□□□□ -2.38
SMCHD1-207ENST00000581711 C5orf58C9J3I9 102 aa0.18□□□□□ -2.38
SMCHD1-207ENST00000581711 TMEM238C9JI98 176 aa0.18□□□□□ -2.38
SMCHD1-207ENST00000581711 E5RI56 91 aa0.18□□□□□ -2.38
SMCHD1-207ENST00000581711 PPP5D1E7EU14 171 aa0.18□□□□□ -2.38
SMCHD1-207ENST00000581711 TRACP01848 142 aa0.18□□□□□ -2.38
SMCHD1-207ENST00000581711 FABP2P12104 132 aa0.18□□□□□ -2.38
SMCHD1-207ENST00000581711 PDE6GP18545 87 aa0.18□□□□□ -2.38
SMCHD1-207ENST00000581711 KDELR1P24390 212 aa0.18□□□□□ -2.38
SMCHD1-207ENST00000581711 SPINT3P49223 89 aa0.18□□□□□ -2.38
SMCHD1-207ENST00000581711 ZNF137PP52743 207 aa0.18□□□□□ -2.38
SMCHD1-207ENST00000581711 CRYBA4P53673 196 aa0.18□□□□□ -2.38
SMCHD1-207ENST00000581711 NDUFA6P56556 154 aa0.18□□□□□ -2.38
SMCHD1-207ENST00000581711 RPL37AP61513 92 aaKnown RBP0.18□□□□□ -2.38
SMCHD1-207ENST00000581711 NEDD8Q15843 81 aa0.18□□□□□ -2.38
SMCHD1-207ENST00000581711 TRIQKQ629K1 86 aa0.18□□□□□ -2.38
SMCHD1-207ENST00000581711 DCUN1D2Q6PH85 259 aa0.18□□□□□ -2.38
SMCHD1-207ENST00000581711 ZCCHC23Q6ZST2 131 aa0.18□□□□□ -2.38
SMCHD1-207ENST00000581711 Q86TA4 180 aa0.18□□□□□ -2.38
SMCHD1-207ENST00000581711 C10orf111Q8N326 155 aa0.18□□□□□ -2.38
SMCHD1-207ENST00000581711 C5orf17Q8NAS9 161 aa0.18□□□□□ -2.38
SMCHD1-207ENST00000581711 OR5H6Q8NGV6 325 aa0.18□□□□□ -2.38
SMCHD1-207ENST00000581711 OR5AK2Q8NH90 309 aa0.18□□□□□ -2.38
SMCHD1-207ENST00000581711 GRPEL2Q8TAA5 225 aa0.18□□□□□ -2.38
SMCHD1-207ENST00000581711 DIRC1Q969H9 104 aa0.18□□□□□ -2.38
SMCHD1-207ENST00000581711 RMND5BQ96G75 393 aaPredicted RBP0.18□□□□□ -2.38
SMCHD1-207ENST00000581711 CARD19Q96LW7 228 aa0.18□□□□□ -2.38
SMCHD1-207ENST00000581711 LRTM1Q9HBL6 345 aa0.18□□□□□ -2.38
SMCHD1-207ENST00000581711 IL20Q9NYY1 176 aa0.18□□□□□ -2.38
SMCHD1-207ENST00000581711 JPT1Q9UK76 154 aa0.18□□□□□ -2.38
SMCHD1-207ENST00000581711 LOC285556D6RIA3 1793 aa0.18□□□□□ -2.38
SMCHD1-207ENST00000581711 BCL9O00512 1426 aa0.18□□□□□ -2.38
SMCHD1-207ENST00000581711 TRAPPC8Q9Y2L5 1435 aa0.18□□□□□ -2.38
SMCHD1-207ENST00000581711 ROCK1Q13464 1354 aa0.18□□□□□ -2.38
SMCHD1-207ENST00000581711 KCPQ6ZWJ8 1503 aa0.18□□□□□ -2.38
SMCHD1-207ENST00000581711 CACNA1EQ15878 2313 aa0.18□□□□□ -2.38
SMCHD1-207ENST00000581711 NBEAQ8NFP9 2946 aa0.17□□□□□ -2.38
SMCHD1-207ENST00000581711 CEP250Q9BV73 2442 aa0.17□□□□□ -2.38
SMCHD1-207ENST00000581711 ZCCHC11Q5TAX3 1644 aaKnown RBP0.17□□□□□ -2.38
SMCHD1-207ENST00000581711 MYH1P12882 1939 aa0.17□□□□□ -2.38
SMCHD1-207ENST00000581711 DCHS1Q96JQ0 3298 aa0.17□□□□□ -2.38
SMCHD1-207ENST00000581711 C3orf85A0A1B0GTC6 90 aa0.17□□□□□ -2.38
SMCHD1-207ENST00000581711 TRDV1A0A1B0GX56 115 aa0.17□□□□□ -2.38
SMCHD1-207ENST00000581711 MAP1LC3B2A6NCE7 125 aa0.17□□□□□ -2.38
SMCHD1-207ENST00000581711 GABARAPH6UMI1 98 aa0.17□□□□□ -2.38
SMCHD1-207ENST00000581711 TECPR2O15040 1411 aa0.17□□□□□ -2.38
SMCHD1-207ENST00000581711 PFDN1O60925 122 aa0.17□□□□□ -2.38
SMCHD1-207ENST00000581711 SULT1C4O75897 302 aa0.17□□□□□ -2.38
SMCHD1-207ENST00000581711 IGHV3-30P01768 117 aa0.17□□□□□ -2.38
SMCHD1-207ENST00000581711 IGHV3-30-5P0DP03 117 aa0.17□□□□□ -2.38
SMCHD1-207ENST00000581711 BCL2P10415 239 aa0.17□□□□□ -2.38
SMCHD1-207ENST00000581711 CCL4P13236 92 aa0.17□□□□□ -2.38
SMCHD1-207ENST00000581711 TPT1P13693 172 aaKnown RBP0.17□□□□□ -2.38
SMCHD1-207ENST00000581711 SDC2P34741 201 aa0.17□□□□□ -2.38
SMCHD1-207ENST00000581711 GNG10P50151 68 aa0.17□□□□□ -2.38
SMCHD1-207ENST00000581711 SPINK7P58062 85 aa0.17□□□□□ -2.38
SMCHD1-207ENST00000581711 C6orf52Q5T4I8 152 aa0.17□□□□□ -2.38
SMCHD1-207ENST00000581711 PPP1R2P3Q6NXS1 205 aa0.17□□□□□ -2.38
SMCHD1-207ENST00000581711 CASC2Q6XLA1 102 aa0.17□□□□□ -2.38
SMCHD1-207ENST00000581711 ANGPTL5Q86XS5 388 aa0.17□□□□□ -2.38
SMCHD1-207ENST00000581711 CCL4L1Q8NHW4 92 aa0.17□□□□□ -2.38
SMCHD1-207ENST00000581711 PLAC4Q8WY50 150 aa0.17□□□□□ -2.38
SMCHD1-207ENST00000581711 PRELID3AQ96N28 172 aa0.17□□□□□ -2.38
SMCHD1-207ENST00000581711 AP1S3Q96PC3 154 aa0.17□□□□□ -2.38
SMCHD1-207ENST00000581711 CCL19Q99731 98 aa0.17□□□□□ -2.38
SMCHD1-207ENST00000581711 LIMD2Q9BT23 127 aa0.17□□□□□ -2.38
SMCHD1-207ENST00000581711 CCDC32Q9BV29 185 aa0.17□□□□□ -2.38
SMCHD1-207ENST00000581711 TAF9BQ9HBM6 251 aa0.17□□□□□ -2.38
SMCHD1-207ENST00000581711 PLAC8Q9NZF1 115 aa0.17□□□□□ -2.38
Retrieved 100 of 20,778 RNA–protein pairs in 59.8 ms