RNA–Protein interactions for RNA: ENST00000571058.5

RPA1-203, Transcript of replication protein A1, humanhuman

TSL 4

Gene RPA1, Length 577 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPA1-203ENST00000571058 HSD17B11Q8NBQ5 300 aa12.06□□□□□ -0.48
RPA1-203ENST00000571058 HYLS1Q96M11 299 aa12.06□□□□□ -0.48
RPA1-203ENST00000571058 TRGV1A0A0A0MS02 117 aa12.05□□□□□ -0.48
RPA1-203ENST00000571058 SPINK4O60575 86 aa12.05□□□□□ -0.48
RPA1-203ENST00000571058 RGS21Q2M5E4 152 aa12.05□□□□□ -0.48
RPA1-203ENST00000571058 Q6AWC8 147 aa12.05□□□□□ -0.48
RPA1-203ENST00000571058 TMPRSS5Q9H3S3 457 aa12.05□□□□□ -0.48
RPA1-203ENST00000571058 SERTM2A0A1B0GWG4 89 aa12.04□□□□□ -0.48
RPA1-203ENST00000571058 PRSS29PA6NIE9 313 aa12.04□□□□□ -0.48
RPA1-203ENST00000571058 RTL8CO15255 209 aa12.04□□□□□ -0.48
RPA1-203ENST00000571058 STAG3L2P0CL84 134 aa12.04□□□□□ -0.48
RPA1-203ENST00000571058 STAG3L3P0CL85 134 aa12.04□□□□□ -0.48
RPA1-203ENST00000571058 HOXA5P20719 270 aa12.04□□□□□ -0.48
RPA1-203ENST00000571058 ATP6V0CP27449 155 aa12.04□□□□□ -0.48
RPA1-203ENST00000571058 ZNF415Q09FC8 603 aa12.04□□□□□ -0.48
RPA1-203ENST00000571058 TNFSF18Q9UNG2 199 aa12.04□□□□□ -0.48
RPA1-203ENST00000571058 KLF12Q9Y4X4 402 aa12.04□□□□□ -0.48
RPA1-203ENST00000571058 HECTD4Q9Y4D8 3996 aa12.03□□□□□ -0.48
RPA1-203ENST00000571058 BORCS7-ASMTA0A0B4J1R7 106 aa12.03□□□□□ -0.48
RPA1-203ENST00000571058 ARL14EPLP0DKL9 152 aa12.03□□□□□ -0.48
RPA1-203ENST00000571058 C1orf134Q5TEV5 83 aa12.03□□□□□ -0.48
RPA1-203ENST00000571058 ZNRF2Q8NHG8 242 aa12.03□□□□□ -0.48
RPA1-203ENST00000571058 ST6GAL2Q96JF0 529 aa12.03□□□□□ -0.48
RPA1-203ENST00000571058 LINC00588Q9Y4M8 146 aa12.03□□□□□ -0.48
RPA1-203ENST00000571058 MUC4Q99102 2169 aa12.03□□□□□ -0.48
RPA1-203ENST00000571058 SLAQ13239 276 aa12.02□□□□□ -0.49
RPA1-203ENST00000571058 Q5BKY6 102 aa12.02□□□□□ -0.49
RPA1-203ENST00000571058 FAM159AQ6UWV7 190 aa12.02□□□□□ -0.49
RPA1-203ENST00000571058 SSX7Q7RTT5 188 aa12.02□□□□□ -0.49
RPA1-203ENST00000571058 OR2T35Q8NGX2 323 aa12.02□□□□□ -0.49
RPA1-203ENST00000571058 RAB24Q969Q5 203 aa12.02□□□□□ -0.49
RPA1-203ENST00000571058 TMEM167BQ9NRX6 74 aa12.02□□□□□ -0.49
RPA1-203ENST00000571058 TP53TG3Q9ULZ0 132 aa12.02□□□□□ -0.49
RPA1-203ENST00000571058 TRGV11A0A075B6L2 103 aa12.01□□□□□ -0.49
RPA1-203ENST00000571058 A0A0J9YY99 117 aa12.01□□□□□ -0.49
RPA1-203ENST00000571058 NBDYA0A0U1RRE5 68 aa12.01□□□□□ -0.49
RPA1-203ENST00000571058 K7EQM0 130 aa12.01□□□□□ -0.49
RPA1-203ENST00000571058 HMGB3O15347 200 aaKnown RBP12.01□□□□□ -0.49
RPA1-203ENST00000571058 EIF3GO75821 320 aaKnown RBP eCLIP12.01□□□□□ -0.49
RPA1-203ENST00000571058 TDRG1Q3Y452 100 aa12.01□□□□□ -0.49
RPA1-203ENST00000571058 GOLT1AQ6ZVE7 132 aa12.01□□□□□ -0.49
RPA1-203ENST00000571058 SUN5Q8TC36 379 aa12.01□□□□□ -0.49
RPA1-203ENST00000571058 SPXQ9BT56 116 aa12.01□□□□□ -0.49
RPA1-203ENST00000571058 ACTR3CQ9C0K3 210 aaPredicted RBP12.01□□□□□ -0.49
RPA1-203ENST00000571058 RPH3ALQ9UNE2 315 aa12.01□□□□□ -0.49
RPA1-203ENST00000571058 FXYD6-FXYD2A0A087WZ82 144 aa12□□□□□ -0.49
RPA1-203ENST00000571058 A0A1B0GVY2 172 aa12□□□□□ -0.49
RPA1-203ENST00000571058 RNF222A6NCQ9 220 aa12□□□□□ -0.49
RPA1-203ENST00000571058 CXorf1O96002 111 aa12□□□□□ -0.49
RPA1-203ENST00000571058 GCHFRP30047 84 aa12□□□□□ -0.49
RPA1-203ENST00000571058 C5orf17Q8NAS9 161 aa12□□□□□ -0.49
RPA1-203ENST00000571058 NDFIP1Q9BT67 221 aa12□□□□□ -0.49
RPA1-203ENST00000571058 TRAV21A0A0B4J279 112 aa11.99□□□□□ -0.49
RPA1-203ENST00000571058 MUC21Q5SSG8 566 aa11.99□□□□□ -0.49
RPA1-203ENST00000571058 Q6ZQT7 251 aa11.99□□□□□ -0.49
RPA1-203ENST00000571058 UPK3BQ9BT76 320 aa11.99□□□□□ -0.49
RPA1-203ENST00000571058 TREM1Q9NP99 234 aa11.99□□□□□ -0.49
RPA1-203ENST00000571058 FBLL1A6NHQ2 334 aaKnown RBP11.98□□□□□ -0.49
RPA1-203ENST00000571058 TAAR5O14804 337 aa11.98□□□□□ -0.49
RPA1-203ENST00000571058 TTC32Q5I0X7 151 aa11.98□□□□□ -0.49
RPA1-203ENST00000571058 RPL7L1Q6DKI1 246 aaKnown RBP11.98□□□□□ -0.49
RPA1-203ENST00000571058 VSIG2Q96IQ7 327 aa11.98□□□□□ -0.49
RPA1-203ENST00000571058 KCNS1Q96KK3 526 aa11.98□□□□□ -0.49
RPA1-203ENST00000571058 SH3BGRL3Q9H299 93 aa11.98□□□□□ -0.49
RPA1-203ENST00000571058 Q9H8V8 135 aa11.98□□□□□ -0.49
RPA1-203ENST00000571058 MRPL16Q9NX20 251 aaKnown RBP11.98□□□□□ -0.49
RPA1-203ENST00000571058 PRO0255Q9UI72 69 aa11.98□□□□□ -0.49
RPA1-203ENST00000571058 TCRAP04437 139 aa11.97□□□□□ -0.49
RPA1-203ENST00000571058 TMEM183BQ1AE95 376 aa11.97□□□□□ -0.49
RPA1-203ENST00000571058 TMEM183AQ8IXX5 376 aa11.97□□□□□ -0.49
RPA1-203ENST00000571058 RASL10AQ92737 203 aa11.97□□□□□ -0.49
RPA1-203ENST00000571058 MDFICQ9P1T7 246 aa11.97□□□□□ -0.49
RPA1-203ENST00000571058 MRPS16Q9Y3D3 137 aaKnown RBP11.97□□□□□ -0.49
RPA1-203ENST00000571058 A0A096LPF7 62 aa11.96□□□□□ -0.49
RPA1-203ENST00000571058 TRAV8-1A0A0A6YYK1 113 aa11.96□□□□□ -0.49
RPA1-203ENST00000571058 A0A1W2PPQ1 181 aa11.96□□□□□ -0.49
RPA1-203ENST00000571058 PAX4O43316 350 aa11.96□□□□□ -0.49
RPA1-203ENST00000571058 GNG5P63218 68 aa11.96□□□□□ -0.49
RPA1-203ENST00000571058 ESRGQ1W209 222 aa11.96□□□□□ -0.49
RPA1-203ENST00000571058 C6orf223Q8N319 242 aa11.96□□□□□ -0.49
RPA1-203ENST00000571058 NAGKQ9UJ70 344 aa11.96□□□□□ -0.49
RPA1-203ENST00000571058 ICOSQ9Y6W8 199 aa11.96□□□□□ -0.49
RPA1-203ENST00000571058 DNAH2Q9P225 4427 aa11.96□□□□□ -0.5
RPA1-203ENST00000571058 DNAH17Q9UFH2 4485 aa11.96□□□□□ -0.5
RPA1-203ENST00000571058 CTXND1A0A1B0GTU2 59 aa11.95□□□□□ -0.5
RPA1-203ENST00000571058 A0A1W2PRE2 83 aa11.95□□□□□ -0.5
RPA1-203ENST00000571058 BTF3P20290 206 aaKnown RBP11.95□□□□□ -0.5
RPA1-203ENST00000571058 SUMO1P63165 101 aaKnown RBP11.95□□□□□ -0.5
RPA1-203ENST00000571058 IQCF2Q8IXL9 164 aa11.95□□□□□ -0.5
RPA1-203ENST00000571058 SDF2L1Q9HCN8 221 aa11.95□□□□□ -0.5
RPA1-203ENST00000571058 EPDR1Q9UM22 224 aa11.95□□□□□ -0.5
RPA1-203ENST00000571058 HHLA3Q9XRX5 114 aa11.95□□□□□ -0.5
RPA1-203ENST00000571058 FAT2Q9NYQ8 4349 aa11.95□□□□□ -0.5
RPA1-203ENST00000571058 IGHV3-53P01767 116 aa11.94□□□□□ -0.5
RPA1-203ENST00000571058 ZFP69Q49AA0 526 aa11.94□□□□□ -0.5
RPA1-203ENST00000571058 CYB561D1Q8N8Q1 229 aa11.94□□□□□ -0.5
RPA1-203ENST00000571058 TVP23CQ96ET8 276 aa11.94□□□□□ -0.5
RPA1-203ENST00000571058 NKX6-2Q9C056 277 aaPredicted RBP11.94□□□□□ -0.5
RPA1-203ENST00000571058 TRGV4A0A0C4DH28 118 aa11.93□□□□□ -0.5
RPA1-203ENST00000571058 GGTLC3B5MD39 225 aa11.93□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 80.5 ms